EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000040563 (Gene tree)
Gene ID: 101099329
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 20435 bases
Position: chrD2:58643352-58663786
Accession: 101099329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000042674	EXOSC1	PF10447.9	7.6e-15	1	1
ENSFCAP00000042884	EXOSC1	PF10447.9	7.6e-15	1	1
ENSFCAP00000048590	EXOSC1	PF10447.9	8.9e-15	1	1
ENSFCAP00000045483	EXOSC1	PF10447.9	2e-13	1	1
ENSFCAP00000050373	ECR1_N	PF14382.6	4.4e-09	1	1
ENSFCAP00000045483	ECR1_N	PF14382.6	5.3e-09	1	1
ENSFCAP00000048590	ECR1_N	PF14382.6	6.3e-09	1	1
ENSFCAP00000029599	ECR1_N	PF14382.6	6.9e-09	1	1
ENSFCAP00000042674	ECR1_N	PF14382.6	7.4e-09	1	1
ENSFCAP00000042884	ECR1_N	PF14382.6	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000040769	EXOSC1-204	537	-	ENSFCAP00000029599	178 (aa)	-	A0A2I2UAV0
ENSFCAT00000054224	EXOSC1-202	4493	-	ENSFCAP00000042674	207 (aa)	-	UPI00059B3DFF
ENSFCAT00000059230	EXOSC1-203	5151	XM_003994263	ENSFCAP00000042884	207 (aa)	XP_003994312	UPI00059B3DFF
ENSFCAT00000065326	EXOSC1-205	513	XM_019813636	ENSFCAP00000045483	170 (aa)	XP_019669195	UPI00005A4E7A
ENSFCAT00000056306	EXOSC1-206	420	-	ENSFCAP00000050373	140 (aa)	-	UPI000DE7E05D
ENSFCAT00000050321	EXOSC1-201	4417	XM_019813635	ENSFCAP00000048590	215 (aa)	XP_019669194	UPI0009487BA0

Gene Model

Click here to download ENSFCAG00000040563's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000040563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000040563	EXOSC1	100	98.235	ENSG00000171311	EXOSC1	100	98.235	Homo_sapiens
ENSFCAG00000040563	EXOSC1	92	80.628	ENSAPOG00000007822	exosc1	98	80.628	Acanthochromis_polyacanthus
ENSFCAG00000040563	EXOSC1	94	100.000	ENSAMEG00000000129	EXOSC1	100	100.000	Ailuropoda_melanoleuca
ENSFCAG00000040563	EXOSC1	91	80.319	ENSACIG00000018956	exosc1	92	80.319	Amphilophus_citrinellus
ENSFCAG00000040563	EXOSC1	92	80.628	ENSAOCG00000010699	exosc1	98	80.628	Amphiprion_ocellaris
ENSFCAG00000040563	EXOSC1	91	79.012	ENSAPEG00000012690	exosc1	96	79.012	Amphiprion_percula
ENSFCAG00000040563	EXOSC1	92	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSFCAG00000040563	EXOSC1	93	86.010	ENSACAG00000002101	EXOSC1	99	86.010	Anolis_carolinensis
ENSFCAG00000040563	EXOSC1	100	99.412	ENSANAG00000034669	EXOSC1	100	99.412	Aotus_nancymaae
ENSFCAG00000040563	EXOSC1	92	80.628	ENSACLG00000021243	exosc1	98	80.628	Astatotilapia_calliptera
ENSFCAG00000040563	EXOSC1	92	82.199	ENSAMXG00000011116	exosc1	98	82.199	Astyanax_mexicanus
ENSFCAG00000040563	EXOSC1	94	99.487	ENSBTAG00000012699	EXOSC1	100	99.487	Bos_taurus
ENSFCAG00000040563	EXOSC1	86	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSFCAG00000040563	EXOSC1	100	98.824	ENSCJAG00000016586	EXOSC1	100	98.824	Callithrix_jacchus
ENSFCAG00000040563	EXOSC1	100	99.517	ENSCAFG00000009068	EXOSC1	100	99.517	Canis_familiaris
ENSFCAG00000040563	EXOSC1	100	99.517	ENSCAFG00020006002	EXOSC1	100	99.517	Canis_lupus_dingo
ENSFCAG00000040563	EXOSC1	94	99.487	ENSCHIG00000015253	EXOSC1	100	99.487	Capra_hircus
ENSFCAG00000040563	EXOSC1	100	98.824	ENSTSYG00000000760	EXOSC1	100	98.824	Carlito_syrichta
ENSFCAG00000040563	EXOSC1	94	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSFCAG00000040563	EXOSC1	100	62.353	ENSCCAG00000023986	EXOSC1	100	62.353	Cebus_capucinus
ENSFCAG00000040563	EXOSC1	100	98.235	ENSCATG00000034114	EXOSC1	100	98.235	Cercocebus_atys
ENSFCAG00000040563	EXOSC1	94	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSFCAG00000040563	EXOSC1	94	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSFCAG00000040563	EXOSC1	95	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSFCAG00000040563	EXOSC1	79	80.180	ENSCPBG00000011949	EXOSC1	92	80.180	Chrysemys_picta_bellii
ENSFCAG00000040563	EXOSC1	90	56.684	ENSCING00000022734	-	89	56.684	Ciona_intestinalis
ENSFCAG00000040563	EXOSC1	90	58.289	ENSCSAVG00000010865	-	95	58.289	Ciona_savignyi
ENSFCAG00000040563	EXOSC1	100	98.235	ENSCANG00000034159	EXOSC1	100	98.235	Colobus_angolensis_palliatus
ENSFCAG00000040563	EXOSC1	94	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSFCAG00000040563	EXOSC1	94	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSFCAG00000040563	EXOSC1	98	77.711	ENSCSEG00000007895	exosc1	95	77.711	Cynoglossus_semilaevis
ENSFCAG00000040563	EXOSC1	98	75.862	ENSCVAG00000016748	exosc1	98	76.963	Cyprinodon_variegatus
ENSFCAG00000040563	EXOSC1	92	81.152	ENSDARG00000059841	exosc1	98	81.152	Danio_rerio
ENSFCAG00000040563	EXOSC1	85	95.833	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSFCAG00000040563	EXOSC1	94	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSFCAG00000040563	EXOSC1	94	45.503	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSFCAG00000040563	EXOSC1	94	95.897	ENSETEG00000002469	-	100	95.897	Echinops_telfairi
ENSFCAG00000040563	EXOSC1	99	58.163	ENSEBUG00000008164	exosc1	97	63.212	Eptatretus_burgeri
ENSFCAG00000040563	EXOSC1	100	89.894	ENSEASG00005008684	EXOSC1	100	89.894	Equus_asinus_asinus
ENSFCAG00000040563	EXOSC1	100	82.143	ENSECAG00000010621	EXOSC1	85	82.143	Equus_caballus
ENSFCAG00000040563	EXOSC1	94	97.949	ENSEEUG00000005647	EXOSC1	100	97.949	Erinaceus_europaeus
ENSFCAG00000040563	EXOSC1	97	76.617	ENSELUG00000017369	exosc1	97	72.455	Esox_lucius
ENSFCAG00000040563	EXOSC1	94	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSFCAG00000040563	EXOSC1	94	98.974	ENSFDAG00000000846	EXOSC1	100	98.974	Fukomys_damarensis
ENSFCAG00000040563	EXOSC1	92	76.963	ENSFHEG00000009154	exosc1	98	76.963	Fundulus_heteroclitus
ENSFCAG00000040563	EXOSC1	92	80.628	ENSGMOG00000008993	exosc1	98	80.628	Gadus_morhua
ENSFCAG00000040563	EXOSC1	100	83.529	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSFCAG00000040563	EXOSC1	98	75.301	ENSGAFG00000010265	exosc1	94	76.963	Gambusia_affinis
ENSFCAG00000040563	EXOSC1	92	80.628	ENSGACG00000018936	exosc1	98	80.628	Gasterosteus_aculeatus
ENSFCAG00000040563	EXOSC1	94	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSFCAG00000040563	EXOSC1	100	97.647	ENSGGOG00000003099	EXOSC1	100	97.647	Gorilla_gorilla
ENSFCAG00000040563	EXOSC1	92	80.628	ENSHBUG00000017857	exosc1	98	80.628	Haplochromis_burtoni
ENSFCAG00000040563	EXOSC1	94	98.462	ENSHGLG00000016927	EXOSC1	100	98.462	Heterocephalus_glaber_female
ENSFCAG00000040563	EXOSC1	94	98.462	ENSHGLG00100012208	EXOSC1	100	98.462	Heterocephalus_glaber_male
ENSFCAG00000040563	EXOSC1	92	79.581	ENSHCOG00000019882	exosc1	98	79.581	Hippocampus_comes
ENSFCAG00000040563	EXOSC1	92	81.152	ENSIPUG00000007685	exosc1	98	81.152	Ictalurus_punctatus
ENSFCAG00000040563	EXOSC1	87	84.553	ENSSTOG00000029860	-	94	84.553	Ictidomys_tridecemlineatus
ENSFCAG00000040563	EXOSC1	94	98.974	ENSSTOG00000006615	EXOSC1	100	98.974	Ictidomys_tridecemlineatus
ENSFCAG00000040563	EXOSC1	94	98.974	ENSJJAG00000013311	Exosc1	100	98.974	Jaculus_jaculus
ENSFCAG00000040563	EXOSC1	98	76.923	ENSKMAG00000001202	exosc1	81	78.646	Kryptolebias_marmoratus
ENSFCAG00000040563	EXOSC1	92	80.105	ENSLBEG00000011448	exosc1	98	80.105	Labrus_bergylta
ENSFCAG00000040563	EXOSC1	98	61.143	ENSLOCG00000003776	exosc1	98	61.143	Lepisosteus_oculatus
ENSFCAG00000040563	EXOSC1	94	97.949	ENSLAFG00000015983	EXOSC1	100	97.949	Loxodonta_africana
ENSFCAG00000040563	EXOSC1	100	98.235	ENSMFAG00000001493	EXOSC1	100	98.235	Macaca_fascicularis
ENSFCAG00000040563	EXOSC1	100	98.235	ENSMMUG00000020028	EXOSC1	100	98.235	Macaca_mulatta
ENSFCAG00000040563	EXOSC1	100	98.235	ENSMNEG00000029816	EXOSC1	100	98.235	Macaca_nemestrina
ENSFCAG00000040563	EXOSC1	100	88.043	ENSMLEG00000027643	EXOSC1	100	91.795	Mandrillus_leucophaeus
ENSFCAG00000040563	EXOSC1	92	81.152	ENSMAMG00000012200	exosc1	98	81.152	Mastacembelus_armatus
ENSFCAG00000040563	EXOSC1	92	80.628	ENSMZEG00005007042	exosc1	98	80.628	Maylandia_zebra
ENSFCAG00000040563	EXOSC1	100	98.235	ENSMAUG00000020462	-	100	98.235	Mesocricetus_auratus
ENSFCAG00000040563	EXOSC1	100	98.824	ENSMICG00000007664	EXOSC1	100	98.824	Microcebus_murinus
ENSFCAG00000040563	EXOSC1	94	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSFCAG00000040563	EXOSC1	91	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSFCAG00000040563	EXOSC1	99	61.236	ENSMMOG00000021403	exosc1	99	61.236	Mola_mola
ENSFCAG00000040563	EXOSC1	94	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSFCAG00000040563	EXOSC1	89	81.522	ENSMALG00000007061	exosc1	92	81.522	Monopterus_albus
ENSFCAG00000040563	EXOSC1	94	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSFCAG00000040563	EXOSC1	94	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSFCAG00000040563	EXOSC1	94	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSFCAG00000040563	EXOSC1	94	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSFCAG00000040563	EXOSC1	94	100.000	ENSMPUG00000017044	EXOSC1	100	100.000	Mustela_putorius_furo
ENSFCAG00000040563	EXOSC1	94	98.462	ENSMLUG00000009228	EXOSC1	100	98.462	Myotis_lucifugus
ENSFCAG00000040563	EXOSC1	94	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSFCAG00000040563	EXOSC1	98	61.714	ENSNBRG00000024007	exosc1	97	61.714	Neolamprologus_brichardi
ENSFCAG00000040563	EXOSC1	100	97.647	ENSNLEG00000013872	EXOSC1	100	97.647	Nomascus_leucogenys
ENSFCAG00000040563	EXOSC1	82	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSFCAG00000040563	EXOSC1	94	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSFCAG00000040563	EXOSC1	94	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSFCAG00000040563	EXOSC1	92	80.628	ENSONIG00000017683	exosc1	98	80.628	Oreochromis_niloticus
ENSFCAG00000040563	EXOSC1	68	93.913	ENSOANG00000006563	EXOSC1	100	91.270	Ornithorhynchus_anatinus
ENSFCAG00000040563	EXOSC1	94	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSFCAG00000040563	EXOSC1	94	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSFCAG00000040563	EXOSC1	92	79.167	ENSORLG00000011595	exosc1	98	79.167	Oryzias_latipes
ENSFCAG00000040563	EXOSC1	92	79.167	ENSORLG00020005831	exosc1	98	79.167	Oryzias_latipes_hni
ENSFCAG00000040563	EXOSC1	92	79.167	ENSORLG00015004317	exosc1	98	79.167	Oryzias_latipes_hsok
ENSFCAG00000040563	EXOSC1	98	59.563	ENSOMEG00000013907	exosc1	98	63.874	Oryzias_melastigma
ENSFCAG00000040563	EXOSC1	94	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSFCAG00000040563	EXOSC1	100	96.618	ENSOARG00000010136	EXOSC1	100	98.974	Ovis_aries
ENSFCAG00000040563	EXOSC1	94	91.371	ENSPPAG00000039842	EXOSC1	100	91.371	Pan_paniscus
ENSFCAG00000040563	EXOSC1	100	100.000	ENSPPRG00000023366	EXOSC1	100	100.000	Panthera_pardus
ENSFCAG00000040563	EXOSC1	100	100.000	ENSPTIG00000017701	EXOSC1	100	100.000	Panthera_tigris_altaica
ENSFCAG00000040563	EXOSC1	100	98.235	ENSPTRG00000002808	EXOSC1	100	98.235	Pan_troglodytes
ENSFCAG00000040563	EXOSC1	100	98.235	ENSPANG00000021324	EXOSC1	100	98.235	Papio_anubis
ENSFCAG00000040563	EXOSC1	92	81.675	ENSPKIG00000016037	exosc1	98	81.675	Paramormyrops_kingsleyae
ENSFCAG00000040563	EXOSC1	71	81.818	ENSPSIG00000013571	EXOSC1	98	81.818	Pelodiscus_sinensis
ENSFCAG00000040563	EXOSC1	98	77.711	ENSPMGG00000014002	exosc1	98	77.711	Periophthalmus_magnuspinnatus
ENSFCAG00000040563	EXOSC1	94	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSFCAG00000040563	EXOSC1	90	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSFCAG00000040563	EXOSC1	94	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSFCAG00000040563	EXOSC1	92	76.440	ENSPFOG00000006755	exosc1	94	76.440	Poecilia_formosa
ENSFCAG00000040563	EXOSC1	92	76.440	ENSPLAG00000005880	exosc1	98	76.440	Poecilia_latipinna
ENSFCAG00000040563	EXOSC1	98	74.251	ENSPMEG00000015598	exosc1	94	76.440	Poecilia_mexicana
ENSFCAG00000040563	EXOSC1	98	74.699	ENSPREG00000000405	exosc1	93	74.699	Poecilia_reticulata
ENSFCAG00000040563	EXOSC1	94	96.923	ENSPPYG00000002531	EXOSC1	100	96.923	Pongo_abelii
ENSFCAG00000040563	EXOSC1	94	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSFCAG00000040563	EXOSC1	100	91.765	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSFCAG00000040563	EXOSC1	94	98.974	ENSPVAG00000003372	EXOSC1	100	98.974	Pteropus_vampyrus
ENSFCAG00000040563	EXOSC1	98	78.916	ENSPNYG00000021745	exosc1	98	80.628	Pundamilia_nyererei
ENSFCAG00000040563	EXOSC1	99	79.762	ENSPNAG00000001944	exosc1	98	81.152	Pygocentrus_nattereri
ENSFCAG00000040563	EXOSC1	94	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSFCAG00000040563	EXOSC1	100	98.235	ENSRBIG00000035618	EXOSC1	100	98.235	Rhinopithecus_bieti
ENSFCAG00000040563	EXOSC1	100	98.235	ENSRROG00000032589	EXOSC1	100	98.235	Rhinopithecus_roxellana
ENSFCAG00000040563	EXOSC1	100	99.412	ENSSBOG00000000359	EXOSC1	100	99.412	Saimiri_boliviensis_boliviensis
ENSFCAG00000040563	EXOSC1	71	98.361	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSFCAG00000040563	EXOSC1	92	83.246	ENSSFOG00015009069	exosc1	98	83.246	Scleropages_formosus
ENSFCAG00000040563	EXOSC1	98	77.844	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSFCAG00000040563	EXOSC1	92	81.152	ENSSMAG00000003721	exosc1	98	81.152	Scophthalmus_maximus
ENSFCAG00000040563	EXOSC1	98	79.885	ENSSDUG00000002993	exosc1	98	81.152	Seriola_dumerili
ENSFCAG00000040563	EXOSC1	98	79.885	ENSSLDG00000025181	exosc1	98	81.152	Seriola_lalandi_dorsalis
ENSFCAG00000040563	EXOSC1	100	84.615	ENSSARG00000000162	EXOSC1	100	84.615	Sorex_araneus
ENSFCAG00000040563	EXOSC1	94	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSFCAG00000040563	EXOSC1	98	79.310	ENSSPAG00000016792	exosc1	82	79.310	Stegastes_partitus
ENSFCAG00000040563	EXOSC1	95	98.985	ENSSSCG00000010518	EXOSC1	92	98.985	Sus_scrofa
ENSFCAG00000040563	EXOSC1	93	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSFCAG00000040563	EXOSC1	95	72.189	ENSTRUG00000007706	exosc1	98	74.603	Takifugu_rubripes
ENSFCAG00000040563	EXOSC1	91	74.479	ENSTNIG00000014079	exosc1	97	74.479	Tetraodon_nigroviridis
ENSFCAG00000040563	EXOSC1	94	90.256	ENSTBEG00000006011	EXOSC1	100	90.256	Tupaia_belangeri
ENSFCAG00000040563	EXOSC1	89	99.457	ENSTTRG00000009887	EXOSC1	100	99.457	Tursiops_truncatus
ENSFCAG00000040563	EXOSC1	100	80.663	ENSUAMG00000010266	EXOSC1	100	83.077	Ursus_americanus
ENSFCAG00000040563	EXOSC1	100	80.663	ENSUMAG00000022002	EXOSC1	100	83.077	Ursus_maritimus
ENSFCAG00000040563	EXOSC1	100	99.517	ENSVVUG00000023192	EXOSC1	67	99.517	Vulpes_vulpes
ENSFCAG00000040563	EXOSC1	93	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSFCAG00000040563	EXOSC1	71	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSFCAG00000040563	EXOSC1	98	74.850	ENSXMAG00000023382	exosc1	93	74.850	Xiphophorus_maculatus