EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000040791 (Gene tree)
Gene ID: 101083587
Gene Symbol: -
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 7545 bases
Position: chrB1:115558066-115565610
Accession: 101083587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000044872	Gar1	PF04410.14	1.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000060143	-	630	XM_003985085	ENSFCAP00000044872	209 (aa)	XP_003985134	UPI0002988DD0

Gene Model

Click here to download ENSFCAG00000040791's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000040791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000040791	-	88	55.862	ENSFCAG00000025841	-	57	64.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000040791	-	52	99.083	ENSG00000109534	GAR1	50	99.083	Homo_sapiens
ENSFCAG00000040791	-	68	91.549	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSFCAG00000040791	-	99	98.058	ENSAMEG00000004605	GAR1	100	98.058	Ailuropoda_melanoleuca
ENSFCAG00000040791	-	51	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSFCAG00000040791	-	51	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSFCAG00000040791	-	51	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSFCAG00000040791	-	51	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSFCAG00000040791	-	51	91.509	ENSACAG00000010031	GAR1	51	90.741	Anolis_carolinensis
ENSFCAG00000040791	-	52	99.083	ENSANAG00000021608	GAR1	100	92.273	Aotus_nancymaae
ENSFCAG00000040791	-	53	88.182	ENSAMXG00000015752	gar1	66	85.000	Astyanax_mexicanus
ENSFCAG00000040791	-	100	96.682	ENSBTAG00000000748	GAR1	100	96.682	Bos_taurus
ENSFCAG00000040791	-	52	99.083	ENSCJAG00000004041	GAR1	50	99.083	Callithrix_jacchus
ENSFCAG00000040791	-	70	93.878	ENSCAFG00000011503	GAR1	60	93.878	Canis_familiaris
ENSFCAG00000040791	-	88	100.000	ENSCAFG00020015566	GAR1	96	100.000	Canis_lupus_dingo
ENSFCAG00000040791	-	62	88.372	ENSCHIG00000011049	-	55	86.239	Capra_hircus
ENSFCAG00000040791	-	99	97.115	ENSCHIG00000016026	-	97	97.115	Capra_hircus
ENSFCAG00000040791	-	52	99.083	ENSTSYG00000013668	-	51	99.083	Carlito_syrichta
ENSFCAG00000040791	-	68	76.923	ENSTSYG00000026632	-	56	90.826	Carlito_syrichta
ENSFCAG00000040791	-	53	99.091	ENSCPOG00000004216	GAR1	50	99.083	Cavia_porcellus
ENSFCAG00000040791	-	52	99.083	ENSCCAG00000029372	GAR1	100	92.273	Cebus_capucinus
ENSFCAG00000040791	-	53	99.091	ENSCATG00000021854	GAR1	55	99.083	Cercocebus_atys
ENSFCAG00000040791	-	53	97.273	ENSCLAG00000005335	GAR1	69	98.182	Chinchilla_lanigera
ENSFCAG00000040791	-	51	99.065	ENSCSAG00000003922	GAR1	55	99.083	Chlorocebus_sabaeus
ENSFCAG00000040791	-	55	98.276	ENSCHOG00000007484	-	51	98.276	Choloepus_hoffmanni
ENSFCAG00000040791	-	59	87.903	ENSCPBG00000004310	GAR1	69	78.102	Chrysemys_picta_bellii
ENSFCAG00000040791	-	53	98.182	ENSCANG00000039262	GAR1	50	98.165	Colobus_angolensis_palliatus
ENSFCAG00000040791	-	51	93.458	ENSCVAG00000002103	gar1	51	93.458	Cyprinodon_variegatus
ENSFCAG00000040791	-	51	91.589	ENSDARG00000076526	gar1	50	90.265	Danio_rerio
ENSFCAG00000040791	-	52	98.165	ENSDNOG00000037632	GAR1	55	98.165	Dasypus_novemcinctus
ENSFCAG00000040791	-	53	97.297	ENSDORG00000000482	Gar1	50	97.248	Dipodomys_ordii
ENSFCAG00000040791	-	99	96.667	ENSEASG00005004658	GAR1	97	96.667	Equus_asinus_asinus
ENSFCAG00000040791	-	99	97.143	ENSECAG00000013624	GAR1	97	97.143	Equus_caballus
ENSFCAG00000040791	-	51	92.453	ENSFALG00000006445	GAR1	50	91.667	Ficedula_albicollis
ENSFCAG00000040791	-	53	90.991	ENSFHEG00000008068	gar1	50	92.523	Fundulus_heteroclitus
ENSFCAG00000040791	-	59	82.258	ENSGAGG00000004393	GAR1	62	89.256	Gopherus_agassizii
ENSFCAG00000040791	-	53	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSFCAG00000040791	-	52	98.165	ENSGGOG00000008681	GAR1	50	98.165	Gorilla_gorilla
ENSFCAG00000040791	-	51	99.065	ENSHGLG00000000493	GAR1	96	98.630	Heterocephalus_glaber_female
ENSFCAG00000040791	-	53	90.000	ENSIPUG00000003194	gar1	63	84.962	Ictalurus_punctatus
ENSFCAG00000040791	-	52	96.330	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSFCAG00000040791	-	53	90.090	ENSKMAG00000010402	gar1	51	92.523	Kryptolebias_marmoratus
ENSFCAG00000040791	-	60	86.607	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSFCAG00000040791	-	52	83.333	ENSMFAG00000003572	-	53	82.569	Macaca_fascicularis
ENSFCAG00000040791	-	53	99.091	ENSMFAG00000024592	GAR1	50	99.083	Macaca_fascicularis
ENSFCAG00000040791	-	53	99.091	ENSMMUG00000021225	GAR1	50	99.083	Macaca_mulatta
ENSFCAG00000040791	-	53	99.091	ENSMNEG00000042594	GAR1	50	99.083	Macaca_nemestrina
ENSFCAG00000040791	-	53	99.091	ENSMLEG00000002496	GAR1	50	99.083	Mandrillus_leucophaeus
ENSFCAG00000040791	-	52	95.413	ENSMAUG00000016788	Gar1	90	80.702	Mesocricetus_auratus
ENSFCAG00000040791	-	67	94.326	ENSMICG00000003326	GAR1	50	98.165	Microcebus_murinus
ENSFCAG00000040791	-	52	96.330	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSFCAG00000040791	-	51	96.262	ENSMMOG00000004156	gar1	52	96.262	Mola_mola
ENSFCAG00000040791	-	51	92.523	ENSMALG00000009672	gar1	50	92.523	Monopterus_albus
ENSFCAG00000040791	-	52	95.413	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSFCAG00000040791	-	53	95.455	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSFCAG00000040791	-	53	97.273	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSFCAG00000040791	-	53	95.455	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSFCAG00000040791	-	100	99.522	ENSMPUG00000008615	GAR1	100	99.522	Mustela_putorius_furo
ENSFCAG00000040791	-	100	91.964	ENSMLUG00000003776	GAR1	100	91.964	Myotis_lucifugus
ENSFCAG00000040791	-	100	93.519	ENSNGAG00000008268	Gar1	99	96.053	Nannospalax_galili
ENSFCAG00000040791	-	53	99.091	ENSNLEG00000016578	GAR1	50	99.083	Nomascus_leucogenys
ENSFCAG00000040791	-	53	82.883	ENSNLEG00000034282	-	55	82.569	Nomascus_leucogenys
ENSFCAG00000040791	-	51	98.131	ENSODEG00000011083	GAR1	56	97.248	Octodon_degus
ENSFCAG00000040791	-	52	98.165	ENSOCUG00000003901	GAR1	51	98.165	Oryctolagus_cuniculus
ENSFCAG00000040791	-	52	98.165	ENSOGAG00000004693	GAR1	51	98.165	Otolemur_garnettii
ENSFCAG00000040791	-	100	97.156	ENSOARG00000004910	GAR1	100	97.156	Ovis_aries
ENSFCAG00000040791	-	52	99.083	ENSPPAG00000014081	GAR1	55	99.083	Pan_paniscus
ENSFCAG00000040791	-	100	99.522	ENSPPRG00000023697	GAR1	100	99.522	Panthera_pardus
ENSFCAG00000040791	-	100	99.522	ENSPTIG00000021565	GAR1	100	99.522	Panthera_tigris_altaica
ENSFCAG00000040791	-	53	99.091	ENSPTRG00000016364	GAR1	55	99.083	Pan_troglodytes
ENSFCAG00000040791	-	78	64.198	ENSPTRG00000049340	-	69	79.021	Pan_troglodytes
ENSFCAG00000040791	-	53	99.091	ENSPANG00000000639	GAR1	50	99.083	Papio_anubis
ENSFCAG00000040791	-	51	93.396	ENSPKIG00000018991	gar1	61	87.591	Paramormyrops_kingsleyae
ENSFCAG00000040791	-	51	92.453	ENSPSIG00000002970	GAR1	50	90.826	Pelodiscus_sinensis
ENSFCAG00000040791	-	52	95.413	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSFCAG00000040791	-	51	92.523	ENSPFOG00000024155	gar1	51	92.523	Poecilia_formosa
ENSFCAG00000040791	-	51	92.523	ENSPLAG00000015056	gar1	51	92.523	Poecilia_latipinna
ENSFCAG00000040791	-	51	93.458	ENSPMEG00000009320	gar1	51	93.458	Poecilia_mexicana
ENSFCAG00000040791	-	52	99.083	ENSPPYG00000014996	GAR1	50	99.083	Pongo_abelii
ENSFCAG00000040791	-	51	99.065	ENSPCOG00000027049	GAR1	56	99.083	Propithecus_coquereli
ENSFCAG00000040791	-	53	91.818	ENSPNYG00000020926	gar1	55	84.848	Pundamilia_nyererei
ENSFCAG00000040791	-	53	96.364	ENSRNOG00000061146	Gar1	63	97.196	Rattus_norvegicus
ENSFCAG00000040791	-	54	81.250	ENSRBIG00000042411	-	53	80.734	Rhinopithecus_bieti
ENSFCAG00000040791	-	51	99.065	ENSRBIG00000019547	GAR1	55	99.083	Rhinopithecus_bieti
ENSFCAG00000040791	-	54	81.250	ENSRROG00000044348	-	52	80.734	Rhinopithecus_roxellana
ENSFCAG00000040791	-	53	99.091	ENSRROG00000028454	GAR1	55	99.083	Rhinopithecus_roxellana
ENSFCAG00000040791	-	52	99.083	ENSSBOG00000024785	GAR1	50	99.083	Saimiri_boliviensis_boliviensis
ENSFCAG00000040791	-	51	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSFCAG00000040791	-	51	93.396	ENSSPUG00000008707	GAR1	61	91.743	Sphenodon_punctatus
ENSFCAG00000040791	-	99	97.596	ENSSSCG00000009137	GAR1	99	97.596	Sus_scrofa
ENSFCAG00000040791	-	68	81.690	ENSTRUG00000020580	gar1	54	89.381	Takifugu_rubripes
ENSFCAG00000040791	-	50	93.269	ENSTNIG00000013023	gar1	61	93.458	Tetraodon_nigroviridis
ENSFCAG00000040791	-	88	98.913	ENSUAMG00000005652	GAR1	96	98.913	Ursus_americanus
ENSFCAG00000040791	-	100	98.086	ENSUMAG00000000776	GAR1	100	98.086	Ursus_maritimus
ENSFCAG00000040791	-	100	98.095	ENSVPAG00000009844	GAR1	88	98.095	Vicugna_pacos
ENSFCAG00000040791	-	100	98.578	ENSVVUG00000017612	GAR1	100	98.578	Vulpes_vulpes