EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000041174 (Gene tree)
Gene ID: 101080671
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain containing 5B
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 4022 bases
Position: chrE2:2626707-2630728
Accession: 101080671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000040966	zf-C2H2	PF00096.26	7e-21	1	4
ENSFCAP00000040966	zf-C2H2	PF00096.26	7e-21	2	4
ENSFCAP00000040966	zf-C2H2	PF00096.26	7e-21	3	4
ENSFCAP00000040966	zf-C2H2	PF00096.26	7e-21	4	4
ENSFCAP00000040966	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000059620	-	1380	XM_023245862	ENSFCAP00000040966	459 (aa)	XP_023101630	UPI000DE7E1F0

Gene Model

Click here to download ENSFCAG00000041174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000041174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000041174	-	51	50.862	ENSFCAG00000040603	-	78	50.862
ENSFCAG00000041174	-	54	41.429	ENSFCAG00000034766	ZNF550	90	41.429
ENSFCAG00000041174	-	60	50.000	ENSFCAG00000043995	ZNF235	82	50.000
ENSFCAG00000041174	-	58	38.462	ENSFCAG00000011815	ZFP64	62	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000041174	-	99	49.364	ENSCHIG00000014993	-	95	49.364	Capra_hircus
ENSFCAG00000041174	-	85	51.106	ENSCHIG00000015589	-	100	51.106	Capra_hircus
ENSFCAG00000041174	-	99	49.153	ENSCHIG00000024202	-	95	49.153	Capra_hircus
ENSFCAG00000041174	-	97	55.675	ENSDNOG00000010100	-	94	55.675	Dasypus_novemcinctus
ENSFCAG00000041174	-	100	59.960	ENSEASG00005020480	-	100	59.960	Equus_asinus_asinus
ENSFCAG00000041174	-	100	62.016	ENSECAG00000006782	-	100	62.016	Equus_caballus
ENSFCAG00000041174	-	97	43.498	ENSMAUG00000015051	Zscan5b	95	43.498	Mesocricetus_auratus
ENSFCAG00000041174	-	99	67.146	ENSMPUG00000006686	-	99	67.146	Mustela_putorius_furo
ENSFCAG00000041174	-	99	45.547	ENSMLUG00000024124	-	99	45.547	Myotis_lucifugus
ENSFCAG00000041174	-	94	48.796	ENSMLUG00000029894	-	99	48.796	Myotis_lucifugus
ENSFCAG00000041174	-	99	43.925	ENSMLUG00000006448	-	97	43.925	Myotis_lucifugus
ENSFCAG00000041174	-	95	51.253	ENSOGAG00000026429	-	92	51.936	Otolemur_garnettii
ENSFCAG00000041174	-	96	50.109	ENSOGAG00000011347	-	93	50.109	Otolemur_garnettii
ENSFCAG00000041174	-	100	97.603	ENSPTIG00000015051	-	100	97.603	Panthera_tigris_altaica
ENSFCAG00000041174	-	100	58.248	ENSPVAG00000017654	-	99	58.248	Pteropus_vampyrus
ENSFCAG00000041174	-	59	51.042	ENSVPAG00000002606	-	100	51.042	Vicugna_pacos