EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000042464 (Gene tree)
Gene ID: 101084190
Gene Symbol: MRPS18C
Alias: CGI-134|FLJ11146|FLJ22967|MRPS18-1
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 4804 bases
Position: chrB1:139355734-139360537
Accession: 101084190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000040372	Ribosomal_S18	PF01084.20	1e-22	1	1
ENSFCAP00000047190	Ribosomal_S18	PF01084.20	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000054069	-	678	XM_011281748	ENSFCAP00000040372	143 (aa)	XP_011280050	A0A2I2V385
ENSFCAT00000065057	-	594	XM_023252976	ENSFCAP00000047190	115 (aa)	XP_023108744	UPI000C2F9341

Gene Model

Click here to download ENSFCAG00000042464's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000042464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000042464	MRPS18C	100	83.333	ENSG00000163319	MRPS18C	100	83.333	Homo_sapiens
ENSFCAG00000042464	MRPS18C	100	79.861	ENSAMEG00000004915	MRPS18C	100	79.861	Ailuropoda_melanoleuca
ENSFCAG00000042464	MRPS18C	100	72.222	ENSANAG00000028055	-	100	72.222	Aotus_nancymaae
ENSFCAG00000042464	MRPS18C	99	73.109	ENSANAG00000025323	-	94	73.109	Aotus_nancymaae
ENSFCAG00000042464	MRPS18C	100	73.043	ENSBTAG00000049836	-	100	73.043	Bos_taurus
ENSFCAG00000042464	MRPS18C	100	79.720	ENSBTAG00000018155	MRPS18C	100	79.720	Bos_taurus
ENSFCAG00000042464	MRPS18C	100	83.333	ENSCJAG00000042247	MRPS18C	97	83.333	Callithrix_jacchus
ENSFCAG00000042464	MRPS18C	100	90.210	ENSCAFG00020010491	MRPS18C	100	90.210	Canis_lupus_dingo
ENSFCAG00000042464	MRPS18C	100	70.629	ENSCHIG00000022740	-	100	70.629	Capra_hircus
ENSFCAG00000042464	MRPS18C	75	71.296	ENSCHIG00000019359	-	98	71.296	Capra_hircus
ENSFCAG00000042464	MRPS18C	99	65.734	ENSCHIG00000018805	-	99	65.734	Capra_hircus
ENSFCAG00000042464	MRPS18C	91	86.154	ENSCHIG00000004461	-	91	86.154	Capra_hircus
ENSFCAG00000042464	MRPS18C	100	65.517	ENSCHIG00000016551	-	100	65.517	Capra_hircus
ENSFCAG00000042464	MRPS18C	100	83.217	ENSTSYG00000012924	MRPS18C	100	83.217	Carlito_syrichta
ENSFCAG00000042464	MRPS18C	100	80.556	ENSCPOG00000009198	MRPS18C	100	80.556	Cavia_porcellus
ENSFCAG00000042464	MRPS18C	100	81.944	ENSCCAG00000026577	-	100	81.944	Cebus_capucinus
ENSFCAG00000042464	MRPS18C	100	72.222	ENSCCAG00000028283	-	100	72.222	Cebus_capucinus
ENSFCAG00000042464	MRPS18C	100	79.861	ENSCCAG00000019347	-	100	79.861	Cebus_capucinus
ENSFCAG00000042464	MRPS18C	99	68.531	ENSCCAG00000025155	-	95	68.531	Cebus_capucinus
ENSFCAG00000042464	MRPS18C	100	84.028	ENSCATG00000040697	MRPS18C	100	84.028	Cercocebus_atys
ENSFCAG00000042464	MRPS18C	100	79.861	ENSCLAG00000017397	-	100	79.861	Chinchilla_lanigera
ENSFCAG00000042464	MRPS18C	100	80.137	ENSCLAG00000008205	-	100	80.137	Chinchilla_lanigera
ENSFCAG00000042464	MRPS18C	100	72.727	ENSCANG00000041165	-	100	72.727	Colobus_angolensis_palliatus
ENSFCAG00000042464	MRPS18C	99	71.304	ENSCANG00000037347	-	97	71.304	Colobus_angolensis_palliatus
ENSFCAG00000042464	MRPS18C	100	84.028	ENSCANG00000038907	MRPS18C	100	84.028	Colobus_angolensis_palliatus
ENSFCAG00000042464	MRPS18C	100	82.639	ENSCGRG00001000103	Mrps18c	100	82.639	Cricetulus_griseus_chok1gshd
ENSFCAG00000042464	MRPS18C	100	82.639	ENSCGRG00000002192	Mrps18c	100	82.639	Cricetulus_griseus_crigri
ENSFCAG00000042464	MRPS18C	99	79.577	ENSDORG00000012749	Mrps18c	100	79.577	Dipodomys_ordii
ENSFCAG00000042464	MRPS18C	100	57.042	ENSETEG00000012223	-	100	57.042	Echinops_telfairi
ENSFCAG00000042464	MRPS18C	100	90.210	ENSEASG00005013234	MRPS18C	100	90.210	Equus_asinus_asinus
ENSFCAG00000042464	MRPS18C	100	90.909	ENSECAG00000020387	MRPS18C	100	90.909	Equus_caballus
ENSFCAG00000042464	MRPS18C	100	62.238	ENSEEUG00000003504	MRPS18C	99	62.238	Erinaceus_europaeus
ENSFCAG00000042464	MRPS18C	100	70.833	ENSFDAG00000008778	-	100	70.833	Fukomys_damarensis
ENSFCAG00000042464	MRPS18C	100	81.944	ENSFDAG00000000250	-	100	81.944	Fukomys_damarensis
ENSFCAG00000042464	MRPS18C	100	67.241	ENSGGOG00000037903	-	100	67.241	Gorilla_gorilla
ENSFCAG00000042464	MRPS18C	100	70.435	ENSGGOG00000040785	-	100	70.435	Gorilla_gorilla
ENSFCAG00000042464	MRPS18C	100	68.750	ENSGGOG00000008603	MRPS18C	100	68.750	Gorilla_gorilla
ENSFCAG00000042464	MRPS18C	100	82.192	ENSHGLG00000002953	-	100	82.192	Heterocephalus_glaber_female
ENSFCAG00000042464	MRPS18C	100	77.083	ENSHGLG00000020134	-	100	77.083	Heterocephalus_glaber_female
ENSFCAG00000042464	MRPS18C	100	77.083	ENSHGLG00000012671	-	98	77.083	Heterocephalus_glaber_female
ENSFCAG00000042464	MRPS18C	100	77.083	ENSHGLG00100019678	-	100	77.083	Heterocephalus_glaber_male
ENSFCAG00000042464	MRPS18C	100	77.083	ENSHGLG00100015568	-	98	77.083	Heterocephalus_glaber_male
ENSFCAG00000042464	MRPS18C	100	82.192	ENSHGLG00100016235	-	100	82.192	Heterocephalus_glaber_male
ENSFCAG00000042464	MRPS18C	100	83.333	ENSSTOG00000007989	MRPS18C	100	83.333	Ictidomys_tridecemlineatus
ENSFCAG00000042464	MRPS18C	100	66.957	ENSJJAG00000022437	Mrps18c	100	66.957	Jaculus_jaculus
ENSFCAG00000042464	MRPS18C	100	79.861	ENSLAFG00000001059	MRPS18C	100	79.861	Loxodonta_africana
ENSFCAG00000042464	MRPS18C	100	82.639	ENSMFAG00000003991	MRPS18C	100	82.639	Macaca_fascicularis
ENSFCAG00000042464	MRPS18C	100	65.833	ENSMFAG00000041276	-	100	65.833	Macaca_fascicularis
ENSFCAG00000042464	MRPS18C	100	75.694	ENSMMUG00000048717	-	100	75.694	Macaca_mulatta
ENSFCAG00000042464	MRPS18C	100	79.310	ENSMMUG00000015353	MRPS18C	100	79.310	Macaca_mulatta
ENSFCAG00000042464	MRPS18C	100	70.833	ENSMMUG00000039146	-	100	70.833	Macaca_mulatta
ENSFCAG00000042464	MRPS18C	100	63.025	ENSMNEG00000018700	-	100	63.025	Macaca_nemestrina
ENSFCAG00000042464	MRPS18C	100	82.639	ENSMNEG00000043663	MRPS18C	100	82.639	Macaca_nemestrina
ENSFCAG00000042464	MRPS18C	100	84.028	ENSMLEG00000038884	MRPS18C	100	84.028	Mandrillus_leucophaeus
ENSFCAG00000042464	MRPS18C	100	76.068	ENSMICG00000037615	-	100	76.068	Microcebus_murinus
ENSFCAG00000042464	MRPS18C	100	81.250	ENSMICG00000032609	-	100	81.250	Microcebus_murinus
ENSFCAG00000042464	MRPS18C	100	79.861	ENSMOCG00000009898	-	100	79.861	Microtus_ochrogaster
ENSFCAG00000042464	MRPS18C	100	81.250	ENSMOCG00000015591	-	100	81.250	Microtus_ochrogaster
ENSFCAG00000042464	MRPS18C	97	76.224	ENSMODG00000020773	MRPS18C	99	76.224	Monodelphis_domestica
ENSFCAG00000042464	MRPS18C	100	80.822	MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.822	Mus_caroli
ENSFCAG00000042464	MRPS18C	100	78.767	ENSMUSG00000016833	Mrps18c	100	78.767	Mus_musculus
ENSFCAG00000042464	MRPS18C	100	81.507	MGP_PahariEiJ_G0017236	Mrps18c	100	81.507	Mus_pahari
ENSFCAG00000042464	MRPS18C	83	79.508	MGP_SPRETEiJ_G0028455	Mrps18c	93	79.508	Mus_spretus
ENSFCAG00000042464	MRPS18C	100	79.021	ENSMLUG00000017057	MRPS18C	100	79.021	Myotis_lucifugus
ENSFCAG00000042464	MRPS18C	78	92.857	ENSNGAG00000015980	Mrps18c	100	81.250	Nannospalax_galili
ENSFCAG00000042464	MRPS18C	100	83.333	ENSNLEG00000009119	MRPS18C	100	83.333	Nomascus_leucogenys
ENSFCAG00000042464	MRPS18C	100	75.694	ENSNLEG00000018188	-	100	75.694	Nomascus_leucogenys
ENSFCAG00000042464	MRPS18C	69	75.758	ENSOPRG00000004113	MRPS18C	68	75.758	Ochotona_princeps
ENSFCAG00000042464	MRPS18C	100	80.822	ENSODEG00000007599	-	100	80.822	Octodon_degus
ENSFCAG00000042464	MRPS18C	100	81.944	ENSODEG00000020349	-	100	81.944	Octodon_degus
ENSFCAG00000042464	MRPS18C	100	82.517	ENSOARG00000002770	MRPS18C	100	82.517	Ovis_aries
ENSFCAG00000042464	MRPS18C	100	68.966	ENSPPAG00000037400	-	100	68.966	Pan_paniscus
ENSFCAG00000042464	MRPS18C	100	83.333	ENSPPAG00000037122	MRPS18C	100	83.333	Pan_paniscus
ENSFCAG00000042464	MRPS18C	100	99.301	ENSPPRG00000011089	MRPS18C	100	99.301	Panthera_pardus
ENSFCAG00000042464	MRPS18C	100	98.601	ENSPTIG00000021242	MRPS18C	100	98.601	Panthera_tigris_altaica
ENSFCAG00000042464	MRPS18C	100	83.333	ENSPTRG00000016233	MRPS18C	100	83.333	Pan_troglodytes
ENSFCAG00000042464	MRPS18C	100	68.103	ENSPTRG00000047058	-	100	68.103	Pan_troglodytes
ENSFCAG00000042464	MRPS18C	100	70.833	ENSPANG00000034202	-	100	70.833	Papio_anubis
ENSFCAG00000042464	MRPS18C	100	83.333	ENSPANG00000033931	MRPS18C	100	83.333	Papio_anubis
ENSFCAG00000042464	MRPS18C	100	82.639	ENSPEMG00000008390	Mrps18c	100	82.639	Peromyscus_maniculatus_bairdii
ENSFCAG00000042464	MRPS18C	99	77.305	ENSPCIG00000005376	-	100	77.305	Phascolarctos_cinereus
ENSFCAG00000042464	MRPS18C	71	92.157	ENSPCIG00000019737	-	100	92.157	Phascolarctos_cinereus
ENSFCAG00000042464	MRPS18C	77	74.545	ENSPCIG00000000097	-	79	74.545	Phascolarctos_cinereus
ENSFCAG00000042464	MRPS18C	99	77.622	ENSPPYG00000025835	-	100	77.622	Pongo_abelii
ENSFCAG00000042464	MRPS18C	100	84.028	ENSPPYG00000025867	MRPS18C	100	84.028	Pongo_abelii
ENSFCAG00000042464	MRPS18C	100	79.167	ENSPCAG00000004975	MRPS18C	100	79.167	Procavia_capensis
ENSFCAG00000042464	MRPS18C	100	83.562	ENSPCOG00000017634	MRPS18C	100	83.562	Propithecus_coquereli
ENSFCAG00000042464	MRPS18C	69	80.612	ENSPVAG00000006439	MRPS18C	100	80.612	Pteropus_vampyrus
ENSFCAG00000042464	MRPS18C	100	78.767	ENSRNOG00000002178	Mrps18c	100	78.767	Rattus_norvegicus
ENSFCAG00000042464	MRPS18C	100	84.028	ENSRBIG00000041685	MRPS18C	100	84.028	Rhinopithecus_bieti
ENSFCAG00000042464	MRPS18C	100	66.957	ENSRBIG00000031637	-	100	66.957	Rhinopithecus_bieti
ENSFCAG00000042464	MRPS18C	100	75.524	ENSRBIG00000035023	-	100	75.524	Rhinopithecus_bieti
ENSFCAG00000042464	MRPS18C	100	75.524	ENSRROG00000033834	-	100	75.524	Rhinopithecus_roxellana
ENSFCAG00000042464	MRPS18C	100	84.028	ENSRROG00000044334	MRPS18C	100	84.028	Rhinopithecus_roxellana
ENSFCAG00000042464	MRPS18C	100	66.087	ENSRROG00000030722	-	100	66.087	Rhinopithecus_roxellana
ENSFCAG00000042464	MRPS18C	99	73.427	ENSSBOG00000022205	-	92	73.427	Saimiri_boliviensis_boliviensis
ENSFCAG00000042464	MRPS18C	100	64.336	ENSSBOG00000029234	-	100	64.336	Saimiri_boliviensis_boliviensis
ENSFCAG00000042464	MRPS18C	86	74.194	ENSSBOG00000032292	-	90	74.194	Saimiri_boliviensis_boliviensis
ENSFCAG00000042464	MRPS18C	100	83.333	ENSSBOG00000027568	-	100	83.333	Saimiri_boliviensis_boliviensis
ENSFCAG00000042464	MRPS18C	92	80.000	ENSSHAG00000007084	MRPS18C	94	80.000	Sarcophilus_harrisii
ENSFCAG00000042464	MRPS18C	100	86.713	ENSSSCG00000038042	MRPS18C	100	86.713	Sus_scrofa
ENSFCAG00000042464	MRPS18C	100	79.861	ENSTBEG00000012505	MRPS18C	100	79.861	Tupaia_belangeri
ENSFCAG00000042464	MRPS18C	100	87.413	ENSTTRG00000004897	MRPS18C	100	87.413	Tursiops_truncatus
ENSFCAG00000042464	MRPS18C	100	91.608	ENSUAMG00000012878	MRPS18C	100	91.608	Ursus_americanus
ENSFCAG00000042464	MRPS18C	100	91.608	ENSUMAG00000008829	MRPS18C	100	91.608	Ursus_maritimus
ENSFCAG00000042464	MRPS18C	100	85.315	ENSVPAG00000011358	MRPS18C	100	85.315	Vicugna_pacos
ENSFCAG00000042464	MRPS18C	100	90.909	ENSVVUG00000015672	MRPS18C	100	90.909	Vulpes_vulpes