EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000042916 (Gene tree)
Gene ID: 101093675
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 16343 bases
Position: chrA3:5897059-5913401
Accession: 101093675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000050263	RRM_1	PF00076.22	1.5e-18	1	1
ENSFCAP00000044962	RRM_1	PF00076.22	5.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000059442	RBM38-202	366	-	ENSFCAP00000050263	121 (aa)	-	UPI000DE7E730
ENSFCAT00000066450	RBM38-201	2664	XM_006929636	ENSFCAP00000044962	239 (aa)	XP_006929698	UPI000905AFC5

Gene Model

Click here to download ENSFCAG00000042916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000042916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000042916	RBM38	55	31.343	ENSFCAG00000036326	SLIRP	69	30.882
ENSFCAG00000042916	RBM38	67	32.927	ENSFCAG00000021952	-	85	32.895
ENSFCAG00000042916	RBM38	97	35.294	ENSFCAG00000010767	DAZAP1	50	34.862
ENSFCAG00000042916	RBM38	81	90.816	ENSFCAG00000046251	RBM24	100	68.067
ENSFCAG00000042916	RBM38	74	42.857	ENSFCAG00000027765	HNRNPA2B1	57	42.857
ENSFCAG00000042916	RBM38	88	37.113	ENSFCAG00000033787	-	77	37.113
ENSFCAG00000042916	RBM38	67	38.667	ENSFCAG00000040261	HNRNPA0	51	38.667
ENSFCAG00000042916	RBM38	62	45.588	ENSFCAG00000012001	-	69	45.588
ENSFCAG00000042916	RBM38	82	42.373	ENSFCAG00000041686	MSI2	83	41.667
ENSFCAG00000042916	RBM38	64	39.706	ENSFCAG00000028796	-	70	39.706
ENSFCAG00000042916	RBM38	67	36.145	ENSFCAG00000030938	-	90	36.145
ENSFCAG00000042916	RBM38	64	44.118	ENSFCAG00000042512	-	73	41.558
ENSFCAG00000042916	RBM38	62	44.118	ENSFCAG00000035826	-	69	44.118
ENSFCAG00000042916	RBM38	75	34.667	ENSFCAG00000027603	HNRNPAB	62	34.667
ENSFCAG00000042916	RBM38	69	41.667	ENSFCAG00000013724	CIRBP	50	41.667
ENSFCAG00000042916	RBM38	64	44.118	ENSFCAG00000010150	HNRNPA1	55	44.118
ENSFCAG00000042916	RBM38	64	42.373	ENSFCAG00000011007	MSI1	68	36.842
ENSFCAG00000042916	RBM38	97	36.364	ENSFCAG00000033796	-	59	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000042916	RBM38	100	97.521	ENSG00000132819	RBM38	100	97.521	Homo_sapiens
ENSFCAG00000042916	RBM38	80	85.714	ENSAPOG00000003301	rbm38	91	58.621	Acanthochromis_polyacanthus
ENSFCAG00000042916	RBM38	82	89.109	ENSAPOG00000009939	-	94	67.873	Acanthochromis_polyacanthus
ENSFCAG00000042916	RBM38	81	84.848	ENSACIG00000000010	rbm38	74	63.298	Amphilophus_citrinellus
ENSFCAG00000042916	RBM38	81	91.919	ENSACIG00000012502	-	100	88.034	Amphilophus_citrinellus
ENSFCAG00000042916	RBM38	100	78.862	ENSAOCG00000012559	RBM38	99	64.198	Amphiprion_ocellaris
ENSFCAG00000042916	RBM38	81	84.848	ENSAOCG00000013497	-	91	58.621	Amphiprion_ocellaris
ENSFCAG00000042916	RBM38	98	76.230	ENSAPEG00000013137	rbm38	99	59.426	Amphiprion_percula
ENSFCAG00000042916	RBM38	84	87.500	ENSAPEG00000023581	-	95	64.979	Amphiprion_percula
ENSFCAG00000042916	RBM38	81	83.838	ENSATEG00000016366	rbm38	94	60.714	Anabas_testudineus
ENSFCAG00000042916	RBM38	84	86.538	ENSATEG00000016710	-	92	66.234	Anabas_testudineus
ENSFCAG00000042916	RBM38	82	90.909	ENSACAG00000016238	RBM38	97	74.153	Anolis_carolinensis
ENSFCAG00000042916	RBM38	100	98.347	ENSANAG00000031959	RBM38	100	98.347	Aotus_nancymaae
ENSFCAG00000042916	RBM38	84	87.500	ENSACLG00000019514	-	92	67.100	Astatotilapia_calliptera
ENSFCAG00000042916	RBM38	82	90.099	ENSAMXG00000015601	-	95	68.696	Astyanax_mexicanus
ENSFCAG00000042916	RBM38	76	86.957	ENSAMXG00000038120	rbm38	76	64.865	Astyanax_mexicanus
ENSFCAG00000042916	RBM38	100	98.347	ENSBTAG00000008105	RBM38	100	96.234	Bos_taurus
ENSFCAG00000042916	RBM38	74	84.270	WBGene00006321	sup-12	59	84.270	Caenorhabditis_elegans
ENSFCAG00000042916	RBM38	100	98.347	ENSCJAG00000019139	RBM38	100	98.347	Callithrix_jacchus
ENSFCAG00000042916	RBM38	100	99.174	ENSCAFG00020021943	RBM38	100	97.490	Canis_lupus_dingo
ENSFCAG00000042916	RBM38	100	98.347	ENSCHIG00000002609	RBM38	100	95.816	Capra_hircus
ENSFCAG00000042916	RBM38	100	98.347	ENSCPOG00000012781	RBM38	100	95.397	Cavia_porcellus
ENSFCAG00000042916	RBM38	100	98.347	ENSCCAG00000036872	RBM38	100	98.347	Cebus_capucinus
ENSFCAG00000042916	RBM38	100	98.347	ENSCATG00000032133	RBM38	100	98.347	Cercocebus_atys
ENSFCAG00000042916	RBM38	96	95.217	ENSCLAG00000005906	RBM38	100	95.217	Chinchilla_lanigera
ENSFCAG00000042916	RBM38	100	98.347	ENSCSAG00000015503	RBM38	100	96.234	Chlorocebus_sabaeus
ENSFCAG00000042916	RBM38	81	93.878	ENSCPBG00000024059	RBM38	100	82.110	Chrysemys_picta_bellii
ENSFCAG00000042916	RBM38	80	84.536	ENSCSAVG00000001132	-	59	62.658	Ciona_savignyi
ENSFCAG00000042916	RBM38	99	79.167	ENSCANG00000030105	-	89	72.269	Colobus_angolensis_palliatus
ENSFCAG00000042916	RBM38	100	94.215	ENSCGRG00001012928	Rbm38	100	90.795	Cricetulus_griseus_chok1gshd
ENSFCAG00000042916	RBM38	78	92.553	ENSCSEG00000004701	-	93	67.890	Cynoglossus_semilaevis
ENSFCAG00000042916	RBM38	79	81.250	ENSCSEG00000020943	rbm38	60	60.326	Cynoglossus_semilaevis
ENSFCAG00000042916	RBM38	78	94.681	ENSCVAG00000005472	-	92	66.667	Cyprinodon_variegatus
ENSFCAG00000042916	RBM38	76	90.217	ENSCVAG00000015952	rbm38	91	57.082	Cyprinodon_variegatus
ENSFCAG00000042916	RBM38	78	91.489	ENSDARG00000058818	rbm38	92	64.574	Danio_rerio
ENSFCAG00000042916	RBM38	90	89.815	ENSDNOG00000032004	RBM38	100	89.352	Dasypus_novemcinctus
ENSFCAG00000042916	RBM38	88	83.178	ENSEBUG00000015164	rbm38	88	66.438	Eptatretus_burgeri
ENSFCAG00000042916	RBM38	100	98.347	ENSECAG00000007700	RBM38	100	94.979	Equus_caballus
ENSFCAG00000042916	RBM38	100	95.041	ENSEEUG00000013489	RBM38	100	94.167	Erinaceus_europaeus
ENSFCAG00000042916	RBM38	82	87.129	ENSELUG00000005849	-	95	66.102	Esox_lucius
ENSFCAG00000042916	RBM38	81	87.879	ENSELUG00000000585	-	80	68.478	Esox_lucius
ENSFCAG00000042916	RBM38	85	92.233	ENSFALG00000010805	RBM38	99	79.688	Ficedula_albicollis
ENSFCAG00000042916	RBM38	77	90.323	ENSFHEG00000017748	rbm38	75	63.492	Fundulus_heteroclitus
ENSFCAG00000042916	RBM38	78	94.681	ENSFHEG00000006160	-	92	71.163	Fundulus_heteroclitus
ENSFCAG00000042916	RBM38	78	92.553	ENSGMOG00000016655	-	96	75.275	Gadus_morhua
ENSFCAG00000042916	RBM38	81	93.878	ENSGALG00000026081	RBM38	100	79.817	Gallus_gallus
ENSFCAG00000042916	RBM38	81	87.000	ENSGACG00000009873	-	100	66.816	Gasterosteus_aculeatus
ENSFCAG00000042916	RBM38	80	84.694	ENSGACG00000015224	rbm38	98	60.092	Gasterosteus_aculeatus
ENSFCAG00000042916	RBM38	81	93.878	ENSGAGG00000001187	RBM38	100	82.569	Gopherus_agassizii
ENSFCAG00000042916	RBM38	84	87.500	ENSHBUG00000011778	-	92	70.183	Haplochromis_burtoni
ENSFCAG00000042916	RBM38	92	76.522	ENSHBUG00000012058	rbm38	98	58.159	Haplochromis_burtoni
ENSFCAG00000042916	RBM38	100	96.694	ENSHGLG00000015077	RBM38	100	91.213	Heterocephalus_glaber_female
ENSFCAG00000042916	RBM38	74	84.444	ENSHCOG00000019040	rbm38	65	66.225	Hippocampus_comes
ENSFCAG00000042916	RBM38	82	88.119	ENSHCOG00000005622	-	54	73.438	Hippocampus_comes
ENSFCAG00000042916	RBM38	82	90.099	ENSIPUG00000019349	-	95	65.086	Ictalurus_punctatus
ENSFCAG00000042916	RBM38	60	95.833	ENSJJAG00000016299	-	90	95.833	Jaculus_jaculus
ENSFCAG00000042916	RBM38	74	85.393	ENSKMAG00000012402	rbm38	98	53.390	Kryptolebias_marmoratus
ENSFCAG00000042916	RBM38	81	84.848	ENSLBEG00000018878	rbm38	91	57.940	Labrus_bergylta
ENSFCAG00000042916	RBM38	84	86.538	ENSLBEG00000016163	RBM38	92	70.183	Labrus_bergylta
ENSFCAG00000042916	RBM38	82	90.000	ENSLOCG00000003456	rbm38	95	72.889	Lepisosteus_oculatus
ENSFCAG00000042916	RBM38	97	98.291	ENSMFAG00000043808	RBM38	97	98.291	Macaca_fascicularis
ENSFCAG00000042916	RBM38	100	98.347	ENSMMUG00000031391	RBM38	100	98.347	Macaca_mulatta
ENSFCAG00000042916	RBM38	100	98.347	ENSMNEG00000034683	RBM38	100	98.347	Macaca_nemestrina
ENSFCAG00000042916	RBM38	77	80.645	ENSMLEG00000043261	-	88	83.486	Mandrillus_leucophaeus
ENSFCAG00000042916	RBM38	81	83.838	ENSMAMG00000024135	rbm38	91	59.227	Mastacembelus_armatus
ENSFCAG00000042916	RBM38	82	89.109	ENSMAMG00000020499	RBM38	95	64.831	Mastacembelus_armatus
ENSFCAG00000042916	RBM38	84	87.500	ENSMZEG00005000849	-	92	70.183	Maylandia_zebra
ENSFCAG00000042916	RBM38	81	83.838	ENSMZEG00005026036	rbm38	74	63.830	Maylandia_zebra
ENSFCAG00000042916	RBM38	100	94.215	ENSMAUG00000021211	Rbm38	100	91.213	Mesocricetus_auratus
ENSFCAG00000042916	RBM38	90	96.759	ENSMICG00000038011	RBM38	100	96.759	Microcebus_murinus
ENSFCAG00000042916	RBM38	100	91.736	ENSMOCG00000008715	Rbm38	100	90.377	Microtus_ochrogaster
ENSFCAG00000042916	RBM38	96	79.661	ENSMMOG00000020051	-	99	64.730	Mola_mola
ENSFCAG00000042916	RBM38	100	87.603	ENSMODG00000016458	RBM38	100	79.668	Monodelphis_domestica
ENSFCAG00000042916	RBM38	82	89.109	ENSMALG00000004680	RBM38	70	74.074	Monopterus_albus
ENSFCAG00000042916	RBM38	81	80.612	ENSMALG00000022327	rbm38	67	69.677	Monopterus_albus
ENSFCAG00000042916	RBM38	100	92.562	MGP_CAROLIEiJ_G0024745	Rbm38	100	92.050	Mus_caroli
ENSFCAG00000042916	RBM38	100	92.562	ENSMUSG00000027510	Rbm38	100	92.469	Mus_musculus
ENSFCAG00000042916	RBM38	100	93.388	MGP_PahariEiJ_G0026186	Rbm38	100	91.632	Mus_pahari
ENSFCAG00000042916	RBM38	100	92.562	MGP_SPRETEiJ_G0025665	Rbm38	100	92.050	Mus_spretus
ENSFCAG00000042916	RBM38	81	100.000	ENSMPUG00000006518	RBM38	93	100.000	Mustela_putorius_furo
ENSFCAG00000042916	RBM38	90	92.130	ENSMLUG00000011140	RBM38	100	92.130	Myotis_lucifugus
ENSFCAG00000042916	RBM38	60	93.243	ENSNGAG00000014017	-	64	93.243	Nannospalax_galili
ENSFCAG00000042916	RBM38	92	78.261	ENSNBRG00000022685	rbm38	98	59.167	Neolamprologus_brichardi
ENSFCAG00000042916	RBM38	84	87.500	ENSNBRG00000022545	-	92	67.100	Neolamprologus_brichardi
ENSFCAG00000042916	RBM38	100	80.165	ENSMEUG00000005475	-	100	79.710	Notamacropus_eugenii
ENSFCAG00000042916	RBM38	100	98.347	ENSODEG00000007980	RBM38	100	95.397	Octodon_degus
ENSFCAG00000042916	RBM38	84	87.500	ENSONIG00000020324	-	92	66.957	Oreochromis_niloticus
ENSFCAG00000042916	RBM38	81	83.838	ENSONIG00000017073	rbm38	76	64.362	Oreochromis_niloticus
ENSFCAG00000042916	RBM38	88	89.623	ENSOANG00000009259	RBM38	90	75.847	Ornithorhynchus_anatinus
ENSFCAG00000042916	RBM38	82	88.119	ENSORLG00000027180	-	92	66.094	Oryzias_latipes
ENSFCAG00000042916	RBM38	78	86.316	ENSORLG00000012154	rbm38	74	61.702	Oryzias_latipes
ENSFCAG00000042916	RBM38	80	84.694	ENSORLG00020017871	rbm38	74	62.766	Oryzias_latipes_hni
ENSFCAG00000042916	RBM38	82	88.119	ENSORLG00020020751	-	95	63.710	Oryzias_latipes_hni
ENSFCAG00000042916	RBM38	82	88.119	ENSORLG00015017040	-	92	66.379	Oryzias_latipes_hsok
ENSFCAG00000042916	RBM38	94	77.193	ENSORLG00015012606	rbm38	97	56.596	Oryzias_latipes_hsok
ENSFCAG00000042916	RBM38	82	88.119	ENSOMEG00000023912	-	92	65.368	Oryzias_melastigma
ENSFCAG00000042916	RBM38	80	83.673	ENSOMEG00000006805	rbm38	74	62.766	Oryzias_melastigma
ENSFCAG00000042916	RBM38	100	97.541	ENSOGAG00000029136	RBM38	100	96.250	Otolemur_garnettii
ENSFCAG00000042916	RBM38	100	100.000	ENSPPRG00000009507	RBM38	100	100.000	Panthera_pardus
ENSFCAG00000042916	RBM38	100	97.521	ENSPTRG00000013661	RBM38	100	97.521	Pan_troglodytes
ENSFCAG00000042916	RBM38	81	98.980	ENSPTRG00000045845	-	68	99.194	Pan_troglodytes
ENSFCAG00000042916	RBM38	99	73.333	ENSPANG00000033127	-	100	71.429	Papio_anubis
ENSFCAG00000042916	RBM38	100	98.347	ENSPANG00000020919	-	100	98.347	Papio_anubis
ENSFCAG00000042916	RBM38	84	84.906	ENSPKIG00000025417	rbm38	98	63.934	Paramormyrops_kingsleyae
ENSFCAG00000042916	RBM38	83	91.089	ENSPKIG00000018122	-	100	87.179	Paramormyrops_kingsleyae
ENSFCAG00000042916	RBM38	86	91.346	ENSPSIG00000011649	RBM38	95	80.357	Pelodiscus_sinensis
ENSFCAG00000042916	RBM38	78	86.170	ENSPMGG00000017094	-	72	72.283	Periophthalmus_magnuspinnatus
ENSFCAG00000042916	RBM38	80	84.694	ENSPMGG00000011343	rbm38	94	57.143	Periophthalmus_magnuspinnatus
ENSFCAG00000042916	RBM38	100	87.603	ENSPCIG00000013648	RBM38	100	79.253	Phascolarctos_cinereus
ENSFCAG00000042916	RBM38	78	89.362	ENSPFOG00000011658	rbm38	91	58.120	Poecilia_formosa
ENSFCAG00000042916	RBM38	78	89.362	ENSPLAG00000005218	rbm38	91	58.120	Poecilia_latipinna
ENSFCAG00000042916	RBM38	78	94.681	ENSPLAG00000002500	-	92	67.234	Poecilia_latipinna
ENSFCAG00000042916	RBM38	78	89.362	ENSPMEG00000015770	rbm38	91	58.120	Poecilia_mexicana
ENSFCAG00000042916	RBM38	78	89.362	ENSPREG00000007398	rbm38	91	58.547	Poecilia_reticulata
ENSFCAG00000042916	RBM38	100	97.541	ENSPCOG00000026201	RBM38	100	97.541	Propithecus_coquereli
ENSFCAG00000042916	RBM38	100	68.201	ENSPVAG00000006457	RBM38	100	68.201	Pteropus_vampyrus
ENSFCAG00000042916	RBM38	86	77.778	ENSPNYG00000021373	rbm38	98	55.466	Pundamilia_nyererei
ENSFCAG00000042916	RBM38	81	92.929	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSFCAG00000042916	RBM38	82	90.099	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSFCAG00000042916	RBM38	79	90.625	ENSPNAG00000010596	rbm38	76	70.968	Pygocentrus_nattereri
ENSFCAG00000042916	RBM38	100	93.388	ENSRNOG00000006420	Rbm38	100	92.050	Rattus_norvegicus
ENSFCAG00000042916	RBM38	100	86.777	ENSRROG00000036388	-	100	76.569	Rhinopithecus_roxellana
ENSFCAG00000042916	RBM38	88	98.131	ENSSBOG00000031053	RBM38	100	98.131	Saimiri_boliviensis_boliviensis
ENSFCAG00000042916	RBM38	78	93.617	ENSSFOG00015004453	rbm38	92	70.455	Scleropages_formosus
ENSFCAG00000042916	RBM38	82	88.119	ENSSDUG00000021082	RBM38	92	66.234	Seriola_dumerili
ENSFCAG00000042916	RBM38	80	85.714	ENSSDUG00000022611	rbm38	74	65.957	Seriola_dumerili
ENSFCAG00000042916	RBM38	81	84.848	ENSSLDG00000010845	rbm38	90	62.326	Seriola_lalandi_dorsalis
ENSFCAG00000042916	RBM38	82	88.119	ENSSLDG00000011778	RBM38	92	66.234	Seriola_lalandi_dorsalis
ENSFCAG00000042916	RBM38	81	84.848	ENSSPAG00000011113	rbm38	74	64.894	Stegastes_partitus
ENSFCAG00000042916	RBM38	84	86.538	ENSSPAG00000020989	RBM38	91	68.692	Stegastes_partitus
ENSFCAG00000042916	RBM38	100	99.174	ENSSSCG00000007504	RBM38	100	97.908	Sus_scrofa
ENSFCAG00000042916	RBM38	78	92.553	ENSTRUG00000019869	-	92	67.672	Takifugu_rubripes
ENSFCAG00000042916	RBM38	81	84.848	ENSTRUG00000024954	rbm38	75	62.234	Takifugu_rubripes
ENSFCAG00000042916	RBM38	81	90.000	ENSTNIG00000007093	-	97	69.683	Tetraodon_nigroviridis
ENSFCAG00000042916	RBM38	98	89.076	ENSTBEG00000001689	-	50	89.076	Tupaia_belangeri
ENSFCAG00000042916	RBM38	100	99.174	ENSUAMG00000019780	RBM38	100	98.745	Ursus_americanus
ENSFCAG00000042916	RBM38	100	99.174	ENSVVUG00000017246	RBM38	100	97.490	Vulpes_vulpes
ENSFCAG00000042916	RBM38	81	90.816	ENSXETG00000011268	rbm38	99	74.324	Xenopus_tropicalis
ENSFCAG00000042916	RBM38	78	94.681	ENSXCOG00000017324	-	53	86.325	Xiphophorus_couchianus
ENSFCAG00000042916	RBM38	77	90.323	ENSXMAG00000023662	rbm38	91	58.369	Xiphophorus_maculatus