EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000043095 (Gene tree)
Gene ID: 101080723
Gene Symbol: -
Alias: -
Full Name: SYF2 pre-mRNA splicing factor
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 7577 bases
Position: chrC1:18932212-18939788
Accession: 101080723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000009586	SYF2	PF08231.12	8.1e-55	1	1
ENSFCAP00000046278	SYF2	PF08231.12	2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000052518	-	1878	XM_003989666	ENSFCAP00000046278	246 (aa)	XP_003989715	UPI000904C87F
ENSFCAT00000010327	-	615	-	ENSFCAP00000009586	204 (aa)	-	M3WD32

Gene Model

Click here to download ENSFCAG00000043095's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000043095's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000043095	-	100	93.089	ENSFCAG00000010324	-	85	93.089

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000043095	-	99	93.852	ENSG00000117614	SYF2	99	94.262	Homo_sapiens
ENSFCAG00000043095	-	89	84.475	ENSAPOG00000001174	syf2	97	82.174	Acanthochromis_polyacanthus
ENSFCAG00000043095	-	97	97.059	ENSAMEG00000010115	-	98	97.059	Ailuropoda_melanoleuca
ENSFCAG00000043095	-	79	95.897	ENSAMEG00000010134	-	100	95.897	Ailuropoda_melanoleuca
ENSFCAG00000043095	-	93	78.112	ENSACIG00000023688	syf2	93	78.112	Amphilophus_citrinellus
ENSFCAG00000043095	-	82	83.663	ENSAOCG00000010912	syf2	63	83.663	Amphiprion_ocellaris
ENSFCAG00000043095	-	99	77.016	ENSAOCG00000022046	syf2	93	84.932	Amphiprion_ocellaris
ENSFCAG00000043095	-	99	77.016	ENSAPEG00000018858	syf2	96	77.016	Amphiprion_percula
ENSFCAG00000043095	-	88	82.949	ENSATEG00000007745	syf2	95	80.702	Anabas_testudineus
ENSFCAG00000043095	-	81	88.000	ENSAPLG00000016435	SYF2	99	88.000	Anas_platyrhynchos
ENSFCAG00000043095	-	83	85.784	ENSACAG00000013653	-	100	85.784	Anolis_carolinensis
ENSFCAG00000043095	-	78	76.250	ENSACAG00000026777	-	96	76.250	Anolis_carolinensis
ENSFCAG00000043095	-	99	93.443	ENSANAG00000032473	SYF2	99	93.443	Aotus_nancymaae
ENSFCAG00000043095	-	89	80.822	ENSACLG00000019916	syf2	98	77.778	Astatotilapia_calliptera
ENSFCAG00000043095	-	92	81.057	ENSAMXG00000004051	syf2	94	81.057	Astyanax_mexicanus
ENSFCAG00000043095	-	100	93.902	ENSBTAG00000001651	SYF2	100	94.515	Bos_taurus
ENSFCAG00000043095	-	85	50.952	WBGene00019402	syf-2	98	47.598	Caenorhabditis_elegans
ENSFCAG00000043095	-	99	93.852	ENSCJAG00000046570	SYF2	99	93.852	Callithrix_jacchus
ENSFCAG00000043095	-	98	83.058	ENSCAFG00000030331	-	99	83.058	Canis_familiaris
ENSFCAG00000043095	-	100	97.154	ENSCAFG00000012895	-	100	97.154	Canis_familiaris
ENSFCAG00000043095	-	97	85.787	ENSCAFG00020021094	-	95	85.787	Canis_lupus_dingo
ENSFCAG00000043095	-	100	97.154	ENSCAFG00020021091	-	100	97.154	Canis_lupus_dingo
ENSFCAG00000043095	-	100	93.089	ENSCHIG00000020874	SYF2	100	93.089	Capra_hircus
ENSFCAG00000043095	-	100	93.089	ENSTSYG00000005114	SYF2	100	93.089	Carlito_syrichta
ENSFCAG00000043095	-	80	97.980	ENSCAPG00000010006	SYF2	100	97.980	Cavia_aperea
ENSFCAG00000043095	-	100	91.870	ENSCPOG00000005326	SYF2	100	91.870	Cavia_porcellus
ENSFCAG00000043095	-	99	93.852	ENSCCAG00000022459	SYF2	99	93.852	Cebus_capucinus
ENSFCAG00000043095	-	99	92.623	ENSCATG00000026917	SYF2	99	92.623	Cercocebus_atys
ENSFCAG00000043095	-	100	93.089	ENSCLAG00000008474	SYF2	100	93.089	Chinchilla_lanigera
ENSFCAG00000043095	-	99	92.623	ENSCSAG00000000948	SYF2	99	92.623	Chlorocebus_sabaeus
ENSFCAG00000043095	-	74	76.923	ENSCHOG00000005273	-	100	76.923	Choloepus_hoffmanni
ENSFCAG00000043095	-	91	89.286	ENSCPBG00000025073	SYF2	94	87.607	Chrysemys_picta_bellii
ENSFCAG00000043095	-	86	53.052	ENSCING00000003017	-	89	52.582	Ciona_intestinalis
ENSFCAG00000043095	-	90	47.568	ENSCSAVG00000006627	-	97	50.704	Ciona_savignyi
ENSFCAG00000043095	-	99	80.328	ENSCANG00000037322	SYF2	99	80.328	Colobus_angolensis_palliatus
ENSFCAG00000043095	-	100	91.057	ENSCGRG00001020733	Syf2	100	91.057	Cricetulus_griseus_chok1gshd
ENSFCAG00000043095	-	80	95.918	ENSCGRG00000005095	Syf2	96	95.477	Cricetulus_griseus_crigri
ENSFCAG00000043095	-	89	77.982	ENSCSEG00000000117	syf2	100	71.138	Cynoglossus_semilaevis
ENSFCAG00000043095	-	89	81.735	ENSCVAG00000019543	syf2	98	78.298	Cyprinodon_variegatus
ENSFCAG00000043095	-	89	83.028	ENSDARG00000004706	syf2	92	83.028	Danio_rerio
ENSFCAG00000043095	-	100	93.902	ENSDNOG00000047605	SYF2	100	93.902	Dasypus_novemcinctus
ENSFCAG00000043095	-	100	91.057	ENSDORG00000001274	Syf2	100	91.057	Dipodomys_ordii
ENSFCAG00000043095	-	89	57.727	FBgn0033556	CG12343	97	57.727	Drosophila_melanogaster
ENSFCAG00000043095	-	90	76.471	ENSETEG00000015729	SYF2	100	76.724	Echinops_telfairi
ENSFCAG00000043095	-	88	56.593	ENSEBUG00000015402	syf2	95	61.421	Eptatretus_burgeri
ENSFCAG00000043095	-	100	82.114	ENSEASG00005004232	-	100	82.114	Equus_asinus_asinus
ENSFCAG00000043095	-	100	94.309	ENSEASG00005004224	-	100	94.309	Equus_asinus_asinus
ENSFCAG00000043095	-	100	94.309	ENSECAG00000012023	-	100	94.309	Equus_caballus
ENSFCAG00000043095	-	96	95.339	ENSECAG00000010440	-	98	95.339	Equus_caballus
ENSFCAG00000043095	-	75	81.081	ENSEEUG00000015084	SYF2	100	81.081	Erinaceus_europaeus
ENSFCAG00000043095	-	89	85.321	ENSELUG00000003465	syf2	92	85.321	Esox_lucius
ENSFCAG00000043095	-	83	85.784	ENSFALG00000000460	SYF2	98	79.253	Ficedula_albicollis
ENSFCAG00000043095	-	100	92.276	ENSFDAG00000008310	SYF2	100	92.276	Fukomys_damarensis
ENSFCAG00000043095	-	91	66.964	ENSFHEG00000007238	syf2	99	66.964	Fundulus_heteroclitus
ENSFCAG00000043095	-	89	83.028	ENSGMOG00000019138	syf2	97	83.028	Gadus_morhua
ENSFCAG00000043095	-	92	87.281	ENSGALG00000013639	SYF2	100	81.102	Gallus_gallus
ENSFCAG00000043095	-	93	78.070	ENSGAFG00000019435	syf2	95	78.070	Gambusia_affinis
ENSFCAG00000043095	-	87	83.256	ENSGACG00000007305	syf2	97	78.632	Gasterosteus_aculeatus
ENSFCAG00000043095	-	91	89.823	ENSGAGG00000010670	SYF2	95	87.288	Gopherus_agassizii
ENSFCAG00000043095	-	99	94.262	ENSGGOG00000012796	SYF2	99	94.672	Gorilla_gorilla
ENSFCAG00000043095	-	93	78.112	ENSHBUG00000020477	syf2	100	78.112	Haplochromis_burtoni
ENSFCAG00000043095	-	100	92.276	ENSHGLG00000014393	SYF2	100	92.276	Heterocephalus_glaber_female
ENSFCAG00000043095	-	91	83.036	ENSHGLG00000004304	-	99	80.591	Heterocephalus_glaber_female
ENSFCAG00000043095	-	100	92.276	ENSHGLG00100014722	SYF2	100	92.276	Heterocephalus_glaber_male
ENSFCAG00000043095	-	98	76.735	ENSHCOG00000012904	syf2	79	76.735	Hippocampus_comes
ENSFCAG00000043095	-	90	83.258	ENSIPUG00000019859	syf2	93	83.258	Ictalurus_punctatus
ENSFCAG00000043095	-	59	95.890	ENSSTOG00000023984	SYF2	100	95.890	Ictidomys_tridecemlineatus
ENSFCAG00000043095	-	81	96.985	ENSJJAG00000013301	Syf2	94	96.985	Jaculus_jaculus
ENSFCAG00000043095	-	95	78.632	ENSKMAG00000013856	syf2	97	78.632	Kryptolebias_marmoratus
ENSFCAG00000043095	-	89	83.105	ENSLBEG00000014425	syf2	94	82.063	Labrus_bergylta
ENSFCAG00000043095	-	91	85.333	ENSLACG00000012064	SYF2	93	85.333	Latimeria_chalumnae
ENSFCAG00000043095	-	100	77.291	ENSLOCG00000002728	syf2	95	79.253	Lepisosteus_oculatus
ENSFCAG00000043095	-	74	64.674	ENSLAFG00000030814	-	100	64.674	Loxodonta_africana
ENSFCAG00000043095	-	100	92.683	ENSLAFG00000023150	-	100	92.683	Loxodonta_africana
ENSFCAG00000043095	-	99	93.033	ENSMFAG00000041831	SYF2	99	93.033	Macaca_fascicularis
ENSFCAG00000043095	-	99	92.623	ENSMMUG00000002968	SYF2	99	93.033	Macaca_mulatta
ENSFCAG00000043095	-	99	93.033	ENSMNEG00000030180	SYF2	99	93.033	Macaca_nemestrina
ENSFCAG00000043095	-	99	92.623	ENSMLEG00000030248	SYF2	99	92.623	Mandrillus_leucophaeus
ENSFCAG00000043095	-	88	82.488	ENSMAMG00000010403	syf2	99	75.918	Mastacembelus_armatus
ENSFCAG00000043095	-	93	78.947	ENSMZEG00005006429	syf2	95	78.947	Maylandia_zebra
ENSFCAG00000043095	-	81	88.442	ENSMGAG00000002019	SYF2	100	88.442	Meleagris_gallopavo
ENSFCAG00000043095	-	99	90.574	ENSMAUG00000018974	Syf2	99	90.574	Mesocricetus_auratus
ENSFCAG00000043095	-	87	97.191	ENSMICG00000016191	SYF2	100	97.191	Microcebus_murinus
ENSFCAG00000043095	-	100	91.870	ENSMOCG00000022938	Syf2	100	91.870	Microtus_ochrogaster
ENSFCAG00000043095	-	96	76.695	ENSMMOG00000002396	syf2	97	76.695	Mola_mola
ENSFCAG00000043095	-	92	87.773	ENSMODG00000013951	-	100	87.773	Monodelphis_domestica
ENSFCAG00000043095	-	89	82.273	ENSMALG00000010706	syf2	91	82.727	Monopterus_albus
ENSFCAG00000043095	-	99	91.393	MGP_CAROLIEiJ_G0026633	Syf2	99	91.393	Mus_caroli
ENSFCAG00000043095	-	99	91.393	ENSMUSG00000028821	Syf2	99	91.393	Mus_musculus
ENSFCAG00000043095	-	99	91.393	MGP_PahariEiJ_G0028966	Syf2	99	91.393	Mus_pahari
ENSFCAG00000043095	-	99	91.393	MGP_SPRETEiJ_G0027613	Syf2	99	91.393	Mus_spretus
ENSFCAG00000043095	-	100	97.967	ENSMPUG00000015802	-	100	97.967	Mustela_putorius_furo
ENSFCAG00000043095	-	100	93.089	ENSMPUG00000015801	-	100	93.089	Mustela_putorius_furo
ENSFCAG00000043095	-	95	95.708	ENSMLUG00000001885	SYF2	95	95.708	Myotis_lucifugus
ENSFCAG00000043095	-	100	90.650	ENSNGAG00000007912	Syf2	100	90.650	Nannospalax_galili
ENSFCAG00000043095	-	98	69.421	ENSNBRG00000010720	syf2	100	69.106	Neolamprologus_brichardi
ENSFCAG00000043095	-	99	93.852	ENSNLEG00000035185	SYF2	99	94.262	Nomascus_leucogenys
ENSFCAG00000043095	-	100	90.688	ENSOPRG00000012870	SYF2	100	90.688	Ochotona_princeps
ENSFCAG00000043095	-	96	93.191	ENSODEG00000017664	-	98	93.191	Octodon_degus
ENSFCAG00000043095	-	100	81.301	ENSODEG00000014338	-	99	82.700	Octodon_degus
ENSFCAG00000043095	-	89	80.822	ENSONIG00000008213	syf2	98	77.778	Oreochromis_niloticus
ENSFCAG00000043095	-	82	90.099	ENSOANG00000009552	SYF2	100	90.099	Ornithorhynchus_anatinus
ENSFCAG00000043095	-	100	94.309	ENSOCUG00000013050	SYF2	100	94.309	Oryctolagus_cuniculus
ENSFCAG00000043095	-	89	82.648	ENSORLG00000028820	syf2	94	82.648	Oryzias_latipes
ENSFCAG00000043095	-	89	82.648	ENSORLG00020018333	syf2	92	82.648	Oryzias_latipes_hni
ENSFCAG00000043095	-	94	78.879	ENSORLG00015014665	syf2	96	78.879	Oryzias_latipes_hsok
ENSFCAG00000043095	-	89	83.562	ENSOMEG00000013911	syf2	92	83.562	Oryzias_melastigma
ENSFCAG00000043095	-	100	93.089	ENSOGAG00000009962	SYF2	100	93.089	Otolemur_garnettii
ENSFCAG00000043095	-	79	66.154	ENSOARG00000006269	-	100	66.154	Ovis_aries
ENSFCAG00000043095	-	100	93.548	ENSOARG00000006348	-	100	93.548	Ovis_aries
ENSFCAG00000043095	-	99	94.262	ENSPPAG00000036579	SYF2	99	94.672	Pan_paniscus
ENSFCAG00000043095	-	96	95.781	ENSPPRG00000001638	-	96	95.781	Panthera_pardus
ENSFCAG00000043095	-	100	100.000	ENSPPRG00000001651	-	100	100.000	Panthera_pardus
ENSFCAG00000043095	-	88	97.685	ENSPTIG00000005711	-	83	94.760	Panthera_tigris_altaica
ENSFCAG00000043095	-	100	99.593	ENSPTIG00000007036	-	100	99.593	Panthera_tigris_altaica
ENSFCAG00000043095	-	99	94.262	ENSPTRG00000000352	SYF2	99	94.672	Pan_troglodytes
ENSFCAG00000043095	-	99	93.033	ENSPANG00000008139	SYF2	99	93.033	Papio_anubis
ENSFCAG00000043095	-	95	79.828	ENSPKIG00000008130	syf2	99	79.828	Paramormyrops_kingsleyae
ENSFCAG00000043095	-	96	85.774	ENSPSIG00000011816	SYF2	93	85.774	Pelodiscus_sinensis
ENSFCAG00000043095	-	96	76.371	ENSPMGG00000008755	syf2	92	76.371	Periophthalmus_magnuspinnatus
ENSFCAG00000043095	-	100	91.463	ENSPEMG00000008283	Syf2	100	91.463	Peromyscus_maniculatus_bairdii
ENSFCAG00000043095	-	91	93.304	ENSPCIG00000014235	SYF2	100	86.800	Phascolarctos_cinereus
ENSFCAG00000043095	-	100	74.390	ENSPFOG00000004116	syf2	99	74.390	Poecilia_formosa
ENSFCAG00000043095	-	96	77.119	ENSPLAG00000006691	syf2	99	77.119	Poecilia_latipinna
ENSFCAG00000043095	-	98	73.750	ENSPMEG00000011684	syf2	99	73.750	Poecilia_mexicana
ENSFCAG00000043095	-	88	81.019	ENSPREG00000003009	syf2	99	75.833	Poecilia_reticulata
ENSFCAG00000043095	-	99	93.852	ENSPPYG00000001713	SYF2	99	93.852	Pongo_abelii
ENSFCAG00000043095	-	100	78.431	ENSPCOG00000027011	SYF2	100	78.431	Propithecus_coquereli
ENSFCAG00000043095	-	100	82.114	ENSPVAG00000005841	SYF2	100	82.114	Pteropus_vampyrus
ENSFCAG00000043095	-	89	80.822	ENSPNYG00000004979	syf2	98	77.778	Pundamilia_nyererei
ENSFCAG00000043095	-	96	80.591	ENSPNAG00000015570	syf2	97	80.591	Pygocentrus_nattereri
ENSFCAG00000043095	-	99	91.393	ENSRNOG00000060597	Syf2	99	91.393	Rattus_norvegicus
ENSFCAG00000043095	-	99	90.574	ENSRBIG00000042970	SYF2	99	90.574	Rhinopithecus_bieti
ENSFCAG00000043095	-	99	93.033	ENSRROG00000001347	SYF2	99	93.033	Rhinopithecus_roxellana
ENSFCAG00000043095	-	99	92.623	ENSSBOG00000020184	SYF2	99	92.623	Saimiri_boliviensis_boliviensis
ENSFCAG00000043095	-	92	90.749	ENSSHAG00000015630	-	100	85.542	Sarcophilus_harrisii
ENSFCAG00000043095	-	83	92.718	ENSSHAG00000007152	-	100	92.718	Sarcophilus_harrisii
ENSFCAG00000043095	-	89	84.862	ENSSFOG00015023647	syf2	92	84.862	Scleropages_formosus
ENSFCAG00000043095	-	89	82.110	ENSSMAG00000009867	syf2	92	82.110	Scophthalmus_maximus
ENSFCAG00000043095	-	89	82.569	ENSSDUG00000013072	syf2	92	82.569	Seriola_dumerili
ENSFCAG00000043095	-	89	82.569	ENSSLDG00000012677	syf2	92	82.569	Seriola_lalandi_dorsalis
ENSFCAG00000043095	-	100	74.797	ENSSARG00000012889	SYF2	100	74.797	Sorex_araneus
ENSFCAG00000043095	-	95	85.043	ENSSPUG00000005251	SYF2	92	85.043	Sphenodon_punctatus
ENSFCAG00000043095	-	93	79.310	ENSSPAG00000009626	syf2	95	79.913	Stegastes_partitus
ENSFCAG00000043095	-	100	93.089	ENSSSCG00000037481	SYF2	100	93.089	Sus_scrofa
ENSFCAG00000043095	-	57	74.359	ENSTGUG00000001126	SYF2	100	57.500	Taeniopygia_guttata
ENSFCAG00000043095	-	95	77.682	ENSTRUG00000001499	syf2	92	77.682	Takifugu_rubripes
ENSFCAG00000043095	-	89	79.817	ENSTNIG00000016912	syf2	98	79.817	Tetraodon_nigroviridis
ENSFCAG00000043095	-	100	70.732	ENSTBEG00000017370	SYF2	99	70.325	Tupaia_belangeri
ENSFCAG00000043095	-	100	93.496	ENSTTRG00000003550	SYF2	100	93.496	Tursiops_truncatus
ENSFCAG00000043095	-	100	96.748	ENSUAMG00000002897	SYF2	100	96.748	Ursus_americanus
ENSFCAG00000043095	-	100	97.154	ENSUMAG00000013108	SYF2	100	97.154	Ursus_maritimus
ENSFCAG00000043095	-	100	93.089	ENSVPAG00000005705	SYF2	100	93.089	Vicugna_pacos
ENSFCAG00000043095	-	100	97.154	ENSVVUG00000027175	-	100	97.154	Vulpes_vulpes
ENSFCAG00000043095	-	97	92.887	ENSVVUG00000027181	-	96	92.887	Vulpes_vulpes
ENSFCAG00000043095	-	94	83.621	ENSXETG00000022797	syf2	92	84.716	Xenopus_tropicalis
ENSFCAG00000043095	-	87	81.860	ENSXMAG00000022698	syf2	95	78.509	Xiphophorus_maculatus