EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000043429 (Gene tree)
Gene ID: -
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif-containing protein 1
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Minus strand
Length: 6177 bases
Position: chrE1:45393944-45400120
Accession: 101100197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000046287	RRM_1	PF00076.22	1.4e-06	1	1
ENSFCAP00000046612	RRM_1	PF00076.22	3.6e-06	1	1
ENSFCAP00000042389	RRM_1	PF00076.22	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000058214	RDM1-201	711	XM_023244476	ENSFCAP00000046612	237 (aa)	XP_023100244	UPI000DE7D90B
ENSFCAT00000057215	RDM1-203	420	-	ENSFCAP00000046287	139 (aa)	-	UPI000DE7C527
ENSFCAT00000061894	RDM1-202	627	-	ENSFCAP00000042389	209 (aa)	-	UPI000DE7E4C4

Gene Model

Click here to download ENSFCAG00000043429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000043429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000043429	RDM1	100	86.331	ENSG00000278023	RDM1	99	90.323	Homo_sapiens
ENSFCAG00000043429	RDM1	94	48.485	ENSAPOG00000021886	zgc:103564	87	34.599	Acanthochromis_polyacanthus
ENSFCAG00000043429	RDM1	94	47.727	ENSAPEG00000008929	zgc:103564	85	36.364	Amphiprion_percula
ENSFCAG00000043429	RDM1	92	55.102	ENSAPLG00000004384	RDM1	75	55.102	Anas_platyrhynchos
ENSFCAG00000043429	RDM1	95	56.818	ENSACAG00000012989	-	81	49.130	Anolis_carolinensis
ENSFCAG00000043429	RDM1	100	84.892	ENSANAG00000032752	RDM1	100	84.892	Aotus_nancymaae
ENSFCAG00000043429	RDM1	96	87.218	ENSBTAG00000000030	RDM1	80	84.649	Bos_taurus
ENSFCAG00000043429	RDM1	100	87.050	ENSCJAG00000015031	RDM1	100	87.050	Callithrix_jacchus
ENSFCAG00000043429	RDM1	96	78.676	ENSCAFG00000015160	-	91	76.293	Canis_familiaris
ENSFCAG00000043429	RDM1	96	87.970	ENSCHIG00000020607	RDM1	81	85.526	Capra_hircus
ENSFCAG00000043429	RDM1	96	75.188	ENSCPOG00000001495	-	79	67.841	Cavia_porcellus
ENSFCAG00000043429	RDM1	100	84.173	ENSCCAG00000035763	RDM1	100	84.173	Cebus_capucinus
ENSFCAG00000043429	RDM1	100	84.892	ENSCATG00000044451	RDM1	100	84.892	Cercocebus_atys
ENSFCAG00000043429	RDM1	95	79.612	ENSCSAG00000006209	RDM1	78	79.612	Chlorocebus_sabaeus
ENSFCAG00000043429	RDM1	94	54.229	ENSCPBG00000009105	RDM1	74	54.822	Chrysemys_picta_bellii
ENSFCAG00000043429	RDM1	97	85.185	ENSCANG00000041322	RDM1	100	76.860	Colobus_angolensis_palliatus
ENSFCAG00000043429	RDM1	96	79.699	ENSCGRG00001015927	Rdm1	80	72.489	Cricetulus_griseus_chok1gshd
ENSFCAG00000043429	RDM1	94	41.353	ENSCVAG00000001956	zgc:103564	83	34.934	Cyprinodon_variegatus
ENSFCAG00000043429	RDM1	92	83.590	ENSDNOG00000045224	-	73	83.163	Dasypus_novemcinctus
ENSFCAG00000043429	RDM1	98	82.609	ENSEASG00005010554	RDM1	75	82.297	Equus_asinus_asinus
ENSFCAG00000043429	RDM1	96	87.970	ENSECAG00000022182	RDM1	82	83.913	Equus_caballus
ENSFCAG00000043429	RDM1	92	78.462	ENSEEUG00000006127	RDM1	78	78.462	Erinaceus_europaeus
ENSFCAG00000043429	RDM1	95	65.909	ENSGALG00000000243	RDM1	79	55.066	Gallus_gallus
ENSFCAG00000043429	RDM1	92	52.821	ENSGAGG00000000293	-	62	52.551	Gopherus_agassizii
ENSFCAG00000043429	RDM1	100	85.612	ENSGGOG00000010584	RDM1	100	85.612	Gorilla_gorilla
ENSFCAG00000043429	RDM1	94	44.697	ENSHCOG00000002518	-	82	37.719	Hippocampus_comes
ENSFCAG00000043429	RDM1	96	85.714	ENSSTOG00000022491	RDM1	81	79.565	Ictidomys_tridecemlineatus
ENSFCAG00000043429	RDM1	96	84.962	ENSLAFG00000029300	RDM1	81	82.251	Loxodonta_africana
ENSFCAG00000043429	RDM1	100	84.892	ENSMFAG00000032968	RDM1	100	84.892	Macaca_fascicularis
ENSFCAG00000043429	RDM1	97	86.667	ENSMMUG00000006847	RDM1	95	82.143	Macaca_mulatta
ENSFCAG00000043429	RDM1	100	84.892	ENSMNEG00000039977	RDM1	100	84.892	Macaca_nemestrina
ENSFCAG00000043429	RDM1	97	86.667	ENSMLEG00000041158	RDM1	100	77.686	Mandrillus_leucophaeus
ENSFCAG00000043429	RDM1	92	56.410	ENSMGAG00000008774	RDM1	77	56.122	Meleagris_gallopavo
ENSFCAG00000043429	RDM1	96	81.955	ENSMAUG00000018559	Rdm1	80	74.561	Mesocricetus_auratus
ENSFCAG00000043429	RDM1	96	90.226	ENSMICG00000038651	RDM1	99	84.255	Microcebus_murinus
ENSFCAG00000043429	RDM1	96	81.955	ENSMOCG00000015095	Rdm1	83	74.123	Microtus_ochrogaster
ENSFCAG00000043429	RDM1	95	75.000	ENSMODG00000011101	RDM1	83	66.520	Monodelphis_domestica
ENSFCAG00000043429	RDM1	96	84.211	MGP_CAROLIEiJ_G0017226	Rdm1	80	75.330	Mus_caroli
ENSFCAG00000043429	RDM1	96	83.459	ENSMUSG00000010362	Rdm1	80	75.330	Mus_musculus
ENSFCAG00000043429	RDM1	96	84.962	MGP_PahariEiJ_G0018356	Rdm1	80	74.449	Mus_pahari
ENSFCAG00000043429	RDM1	96	82.707	MGP_SPRETEiJ_G0018069	Rdm1	80	74.890	Mus_spretus
ENSFCAG00000043429	RDM1	96	90.226	ENSMPUG00000008363	RDM1	80	86.900	Mustela_putorius_furo
ENSFCAG00000043429	RDM1	96	90.226	ENSNLEG00000014173	RDM1	95	86.364	Nomascus_leucogenys
ENSFCAG00000043429	RDM1	95	71.212	ENSMEUG00000015826	RDM1	91	63.877	Notamacropus_eugenii
ENSFCAG00000043429	RDM1	96	81.955	ENSOCUG00000022704	RDM1	88	77.193	Oryctolagus_cuniculus
ENSFCAG00000043429	RDM1	96	89.474	ENSOGAG00000011332	RDM1	80	85.903	Otolemur_garnettii
ENSFCAG00000043429	RDM1	96	87.970	ENSPPAG00000029969	RDM1	80	84.581	Pan_paniscus
ENSFCAG00000043429	RDM1	100	86.331	ENSPTRG00000009031	RDM1	100	86.331	Pan_troglodytes
ENSFCAG00000043429	RDM1	100	85.612	ENSPANG00000022933	RDM1	100	85.612	Papio_anubis
ENSFCAG00000043429	RDM1	96	81.955	ENSPEMG00000018985	Rdm1	80	74.890	Peromyscus_maniculatus_bairdii
ENSFCAG00000043429	RDM1	96	87.218	ENSPPYG00000008198	RDM1	80	83.700	Pongo_abelii
ENSFCAG00000043429	RDM1	100	83.453	ENSPCOG00000017995	RDM1	100	83.453	Propithecus_coquereli
ENSFCAG00000043429	RDM1	96	87.218	ENSPVAG00000001116	RDM1	92	84.783	Pteropus_vampyrus
ENSFCAG00000043429	RDM1	96	82.707	ENSRNOG00000020751	Rdm1	80	73.568	Rattus_norvegicus
ENSFCAG00000043429	RDM1	100	84.892	ENSRBIG00000030000	RDM1	100	84.892	Rhinopithecus_bieti
ENSFCAG00000043429	RDM1	97	85.926	ENSRROG00000035242	RDM1	100	77.686	Rhinopithecus_roxellana
ENSFCAG00000043429	RDM1	95	78.788	ENSSHAG00000013584	RDM1	83	70.925	Sarcophilus_harrisii
ENSFCAG00000043429	RDM1	93	62.791	ENSSPUG00000010941	RDM1	80	53.333	Sphenodon_punctatus
ENSFCAG00000043429	RDM1	94	45.455	ENSSPAG00000011690	-	84	37.229	Stegastes_partitus
ENSFCAG00000043429	RDM1	95	71.500	ENSSSCG00000017574	-	91	73.394	Sus_scrofa
ENSFCAG00000043429	RDM1	73	86.139	ENSTBEG00000010030	RDM1	62	75.000	Tupaia_belangeri
ENSFCAG00000043429	RDM1	96	92.481	ENSUAMG00000027279	RDM1	80	88.987	Ursus_americanus
ENSFCAG00000043429	RDM1	96	92.481	ENSUMAG00000015423	RDM1	78	88.987	Ursus_maritimus