EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000044577 (Gene tree)
Gene ID: 101092388
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 380517 bases
Position: chrC2:47771041-48151557
Accession: 101092388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000046248	CMS1	PF14617.6	3.5e-33	1	1
ENSFCAP00000046248	DEAD	PF00270.29	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000054219	CMSS1-201	840	XM_003991578	ENSFCAP00000046248	279 (aa)	XP_003991627	UPI0003F1BBEB

Gene Model

Click here to download ENSFCAG00000044577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000044577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000044577	CMSS1	100	92.115	ENSG00000184220	CMSS1	99	95.062	Homo_sapiens
ENSFCAG00000044577	CMSS1	72	65.347	ENSAPOG00000010604	cmss1	81	65.000	Acanthochromis_polyacanthus
ENSFCAG00000044577	CMSS1	92	94.208	ENSAMEG00000004092	CMSS1	100	94.208	Ailuropoda_melanoleuca
ENSFCAG00000044577	CMSS1	72	55.446	ENSACIG00000021854	cmss1	91	52.066	Amphilophus_citrinellus
ENSFCAG00000044577	CMSS1	100	52.218	ENSAOCG00000013361	cmss1	100	53.633	Amphiprion_ocellaris
ENSFCAG00000044577	CMSS1	100	53.103	ENSAPEG00000005829	cmss1	100	54.296	Amphiprion_percula
ENSFCAG00000044577	CMSS1	100	54.325	ENSATEG00000008209	cmss1	100	54.795	Anabas_testudineus
ENSFCAG00000044577	CMSS1	82	69.565	ENSAPLG00000010542	CMSS1	100	69.565	Anas_platyrhynchos
ENSFCAG00000044577	CMSS1	92	64.015	ENSACAG00000011065	CMSS1	97	64.015	Anolis_carolinensis
ENSFCAG00000044577	CMSS1	100	91.786	ENSANAG00000023565	CMSS1	100	91.786	Aotus_nancymaae
ENSFCAG00000044577	CMSS1	100	50.859	ENSACLG00000027294	cmss1	100	51.546	Astatotilapia_calliptera
ENSFCAG00000044577	CMSS1	100	46.179	ENSAMXG00000002046	cmss1	100	47.667	Astyanax_mexicanus
ENSFCAG00000044577	CMSS1	100	92.115	ENSBTAG00000013663	CMSS1	100	92.115	Bos_taurus
ENSFCAG00000044577	CMSS1	100	91.429	ENSCJAG00000000610	CMSS1	100	91.429	Callithrix_jacchus
ENSFCAG00000044577	CMSS1	92	96.512	ENSCAFG00000009230	CMSS1	93	96.512	Canis_familiaris
ENSFCAG00000044577	CMSS1	83	88.362	ENSCAFG00020024156	-	76	84.490	Canis_lupus_dingo
ENSFCAG00000044577	CMSS1	93	95.753	ENSCAFG00020009464	-	95	95.753	Canis_lupus_dingo
ENSFCAG00000044577	CMSS1	92	91.440	ENSCHIG00000013003	CMSS1	93	91.440	Capra_hircus
ENSFCAG00000044577	CMSS1	96	88.192	ENSTSYG00000009266	CMSS1	99	91.085	Carlito_syrichta
ENSFCAG00000044577	CMSS1	80	73.362	ENSCAPG00000013584	CMSS1	100	73.799	Cavia_aperea
ENSFCAG00000044577	CMSS1	100	89.247	ENSCPOG00000014680	CMSS1	100	89.247	Cavia_porcellus
ENSFCAG00000044577	CMSS1	100	93.214	ENSCCAG00000034685	CMSS1	100	93.214	Cebus_capucinus
ENSFCAG00000044577	CMSS1	100	92.115	ENSCATG00000031980	CMSS1	100	92.115	Cercocebus_atys
ENSFCAG00000044577	CMSS1	82	95.197	ENSCLAG00000011241	CMSS1	98	95.197	Chinchilla_lanigera
ENSFCAG00000044577	CMSS1	88	93.061	ENSCSAG00000006024	CMSS1	100	93.061	Chlorocebus_sabaeus
ENSFCAG00000044577	CMSS1	100	72.401	ENSCHOG00000012098	CMSS1	100	72.401	Choloepus_hoffmanni
ENSFCAG00000044577	CMSS1	70	40.500	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSFCAG00000044577	CMSS1	100	92.115	ENSCANG00000031337	CMSS1	100	92.115	Colobus_angolensis_palliatus
ENSFCAG00000044577	CMSS1	100	83.154	ENSCGRG00001014305	Cmss1	100	83.154	Cricetulus_griseus_chok1gshd
ENSFCAG00000044577	CMSS1	92	84.436	ENSCGRG00000006722	Cmss1	99	84.436	Cricetulus_griseus_crigri
ENSFCAG00000044577	CMSS1	100	51.852	ENSCSEG00000004958	cmss1	100	53.061	Cynoglossus_semilaevis
ENSFCAG00000044577	CMSS1	100	53.608	ENSCVAG00000005039	cmss1	100	54.483	Cyprinodon_variegatus
ENSFCAG00000044577	CMSS1	100	47.333	ENSDARG00000112579	cmss1	100	47.603	Danio_rerio
ENSFCAG00000044577	CMSS1	94	89.313	ENSDNOG00000040418	CMSS1	92	89.961	Dasypus_novemcinctus
ENSFCAG00000044577	CMSS1	100	91.756	ENSDORG00000010461	Cmss1	100	91.756	Dipodomys_ordii
ENSFCAG00000044577	CMSS1	82	94.737	ENSEASG00005010966	CMSS1	99	94.977	Equus_asinus_asinus
ENSFCAG00000044577	CMSS1	95	90.602	ENSECAG00000015662	CMSS1	99	93.363	Equus_caballus
ENSFCAG00000044577	CMSS1	100	56.989	ENSEEUG00000007624	-	100	56.631	Erinaceus_europaeus
ENSFCAG00000044577	CMSS1	100	50.667	ENSELUG00000019459	cmss1	100	52.333	Esox_lucius
ENSFCAG00000044577	CMSS1	86	64.017	ENSFALG00000005816	CMSS1	100	64.017	Ficedula_albicollis
ENSFCAG00000044577	CMSS1	82	92.544	ENSFDAG00000012577	CMSS1	100	92.544	Fukomys_damarensis
ENSFCAG00000044577	CMSS1	81	62.338	ENSFHEG00000012008	cmss1	95	62.338	Fundulus_heteroclitus
ENSFCAG00000044577	CMSS1	99	52.234	ENSGMOG00000016729	cmss1	100	55.160	Gadus_morhua
ENSFCAG00000044577	CMSS1	96	63.806	ENSGALG00000015267	CMSS1	99	64.751	Gallus_gallus
ENSFCAG00000044577	CMSS1	74	64.251	ENSGAFG00000021217	cmss1	76	64.000	Gambusia_affinis
ENSFCAG00000044577	CMSS1	99	48.746	ENSGACG00000002798	cmss1	100	49.104	Gasterosteus_aculeatus
ENSFCAG00000044577	CMSS1	85	71.308	ENSGAGG00000019861	CMSS1	92	71.308	Gopherus_agassizii
ENSFCAG00000044577	CMSS1	92	92.636	ENSGGOG00000014125	CMSS1	99	92.636	Gorilla_gorilla
ENSFCAG00000044577	CMSS1	100	49.829	ENSHBUG00000008431	cmss1	100	51.034	Haplochromis_burtoni
ENSFCAG00000044577	CMSS1	91	88.538	ENSHGLG00000019481	CMSS1	100	88.538	Heterocephalus_glaber_female
ENSFCAG00000044577	CMSS1	92	88.327	ENSHGLG00100010314	CMSS1	100	88.327	Heterocephalus_glaber_male
ENSFCAG00000044577	CMSS1	100	52.881	ENSHCOG00000003222	cmss1	100	54.915	Hippocampus_comes
ENSFCAG00000044577	CMSS1	100	48.966	ENSIPUG00000011591	cmss1	100	49.315	Ictalurus_punctatus
ENSFCAG00000044577	CMSS1	100	93.190	ENSSTOG00000019366	CMSS1	100	93.190	Ictidomys_tridecemlineatus
ENSFCAG00000044577	CMSS1	100	87.097	ENSJJAG00000014894	Cmss1	100	87.097	Jaculus_jaculus
ENSFCAG00000044577	CMSS1	72	55.446	ENSKMAG00000002390	cmss1	80	55.000	Kryptolebias_marmoratus
ENSFCAG00000044577	CMSS1	79	53.333	ENSLBEG00000006298	cmss1	82	58.706	Labrus_bergylta
ENSFCAG00000044577	CMSS1	82	65.217	ENSLACG00000009293	CMSS1	100	65.217	Latimeria_chalumnae
ENSFCAG00000044577	CMSS1	100	52.297	ENSLOCG00000009391	cmss1	100	53.357	Lepisosteus_oculatus
ENSFCAG00000044577	CMSS1	82	91.667	ENSLAFG00000017509	CMSS1	100	91.667	Loxodonta_africana
ENSFCAG00000044577	CMSS1	100	92.832	ENSMFAG00000045006	CMSS1	100	92.832	Macaca_fascicularis
ENSFCAG00000044577	CMSS1	100	92.473	ENSMMUG00000002939	CMSS1	100	92.473	Macaca_mulatta
ENSFCAG00000044577	CMSS1	100	92.473	ENSMNEG00000031315	CMSS1	100	92.473	Macaca_nemestrina
ENSFCAG00000044577	CMSS1	100	92.115	ENSMLEG00000033660	CMSS1	100	92.115	Mandrillus_leucophaeus
ENSFCAG00000044577	CMSS1	100	53.401	ENSMAMG00000017176	cmss1	100	53.448	Mastacembelus_armatus
ENSFCAG00000044577	CMSS1	100	50.859	ENSMZEG00005021886	cmss1	100	51.546	Maylandia_zebra
ENSFCAG00000044577	CMSS1	82	68.860	ENSMGAG00000014360	CMSS1	100	68.860	Meleagris_gallopavo
ENSFCAG00000044577	CMSS1	100	62.857	ENSMAUG00000020609	Cmss1	100	61.484	Mesocricetus_auratus
ENSFCAG00000044577	CMSS1	100	93.548	ENSMICG00000048977	CMSS1	100	93.548	Microcebus_murinus
ENSFCAG00000044577	CMSS1	100	84.588	ENSMOCG00000021937	Cmss1	100	84.588	Microtus_ochrogaster
ENSFCAG00000044577	CMSS1	72	62.871	ENSMMOG00000019794	cmss1	83	62.500	Mola_mola
ENSFCAG00000044577	CMSS1	94	75.954	ENSMODG00000002275	CMSS1	98	75.954	Monodelphis_domestica
ENSFCAG00000044577	CMSS1	100	52.843	ENSMALG00000004250	cmss1	100	52.921	Monopterus_albus
ENSFCAG00000044577	CMSS1	100	84.643	MGP_CAROLIEiJ_G0020824	Cmss1	100	84.643	Mus_caroli
ENSFCAG00000044577	CMSS1	100	85.714	ENSMUSG00000022748	Cmss1	100	85.714	Mus_musculus
ENSFCAG00000044577	CMSS1	100	83.571	MGP_PahariEiJ_G0016524	Cmss1	100	83.571	Mus_pahari
ENSFCAG00000044577	CMSS1	100	85.000	MGP_SPRETEiJ_G0021724	Cmss1	100	85.000	Mus_spretus
ENSFCAG00000044577	CMSS1	92	96.887	ENSMPUG00000011324	CMSS1	99	96.887	Mustela_putorius_furo
ENSFCAG00000044577	CMSS1	92	94.615	ENSMLUG00000001131	CMSS1	99	94.615	Myotis_lucifugus
ENSFCAG00000044577	CMSS1	100	87.455	ENSNGAG00000020316	Cmss1	100	87.455	Nannospalax_galili
ENSFCAG00000044577	CMSS1	100	49.338	ENSNBRG00000003095	cmss1	100	51.546	Neolamprologus_brichardi
ENSFCAG00000044577	CMSS1	100	93.907	ENSNLEG00000034172	CMSS1	100	93.907	Nomascus_leucogenys
ENSFCAG00000044577	CMSS1	82	68.421	ENSMEUG00000014505	CMSS1	100	68.421	Notamacropus_eugenii
ENSFCAG00000044577	CMSS1	100	92.832	ENSOPRG00000002986	CMSS1	100	92.832	Ochotona_princeps
ENSFCAG00000044577	CMSS1	100	83.986	ENSODEG00000003558	-	100	83.986	Octodon_degus
ENSFCAG00000044577	CMSS1	100	73.477	ENSODEG00000009446	-	100	73.477	Octodon_degus
ENSFCAG00000044577	CMSS1	100	78.136	ENSODEG00000001853	-	100	78.136	Octodon_degus
ENSFCAG00000044577	CMSS1	100	89.247	ENSODEG00000005226	-	100	89.247	Octodon_degus
ENSFCAG00000044577	CMSS1	72	62.376	ENSONIG00000006678	cmss1	93	56.198	Oreochromis_niloticus
ENSFCAG00000044577	CMSS1	92	72.308	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSFCAG00000044577	CMSS1	92	94.186	ENSOCUG00000025366	CMSS1	93	94.186	Oryctolagus_cuniculus
ENSFCAG00000044577	CMSS1	100	56.842	ENSORLG00000020340	cmss1	100	56.446	Oryzias_latipes
ENSFCAG00000044577	CMSS1	82	54.148	ENSORLG00020012235	cmss1	85	57.500	Oryzias_latipes_hni
ENSFCAG00000044577	CMSS1	72	57.921	ENSORLG00015015551	cmss1	75	57.500	Oryzias_latipes_hsok
ENSFCAG00000044577	CMSS1	100	54.671	ENSOMEG00000012555	cmss1	100	55.363	Oryzias_melastigma
ENSFCAG00000044577	CMSS1	82	94.298	ENSOGAG00000002045	CMSS1	100	94.298	Otolemur_garnettii
ENSFCAG00000044577	CMSS1	92	91.473	ENSOARG00000017899	CMSS1	89	91.473	Ovis_aries
ENSFCAG00000044577	CMSS1	92	93.023	ENSPPAG00000038515	CMSS1	95	93.023	Pan_paniscus
ENSFCAG00000044577	CMSS1	100	98.925	ENSPPRG00000016767	CMSS1	100	98.925	Panthera_pardus
ENSFCAG00000044577	CMSS1	100	98.566	ENSPTIG00000018274	CMSS1	100	98.566	Panthera_tigris_altaica
ENSFCAG00000044577	CMSS1	100	92.115	ENSPTRG00000015157	CMSS1	100	92.653	Pan_troglodytes
ENSFCAG00000044577	CMSS1	92	89.535	ENSPANG00000019980	CMSS1	99	89.535	Papio_anubis
ENSFCAG00000044577	CMSS1	91	57.358	ENSPKIG00000012609	cmss1	97	58.333	Paramormyrops_kingsleyae
ENSFCAG00000044577	CMSS1	82	73.362	ENSPSIG00000003849	CMSS1	100	73.362	Pelodiscus_sinensis
ENSFCAG00000044577	CMSS1	72	62.562	ENSPMGG00000010286	cmss1	86	62.189	Periophthalmus_magnuspinnatus
ENSFCAG00000044577	CMSS1	100	85.000	ENSPEMG00000016384	Cmss1	100	85.000	Peromyscus_maniculatus_bairdii
ENSFCAG00000044577	CMSS1	73	53.431	ENSPMAG00000001146	cmss1	98	53.500	Petromyzon_marinus
ENSFCAG00000044577	CMSS1	92	76.154	ENSPCIG00000015656	CMSS1	98	76.154	Phascolarctos_cinereus
ENSFCAG00000044577	CMSS1	100	52.613	ENSPFOG00000016849	cmss1	100	54.861	Poecilia_formosa
ENSFCAG00000044577	CMSS1	100	52.265	ENSPLAG00000008323	cmss1	100	54.514	Poecilia_latipinna
ENSFCAG00000044577	CMSS1	100	53.103	ENSPMEG00000021020	cmss1	100	53.979	Poecilia_mexicana
ENSFCAG00000044577	CMSS1	92	55.344	ENSPREG00000007618	cmss1	88	55.939	Poecilia_reticulata
ENSFCAG00000044577	CMSS1	100	91.756	ENSPPYG00000013606	CMSS1	100	91.756	Pongo_abelii
ENSFCAG00000044577	CMSS1	100	93.907	ENSPCOG00000020035	CMSS1	100	93.907	Propithecus_coquereli
ENSFCAG00000044577	CMSS1	100	82.079	ENSPVAG00000017031	CMSS1	100	82.079	Pteropus_vampyrus
ENSFCAG00000044577	CMSS1	91	50.943	ENSPNYG00000013428	cmss1	97	51.698	Pundamilia_nyererei
ENSFCAG00000044577	CMSS1	100	49.175	ENSPNAG00000007912	cmss1	100	50.165	Pygocentrus_nattereri
ENSFCAG00000044577	CMSS1	92	83.784	ENSRNOG00000027888	Cmss1	99	83.784	Rattus_norvegicus
ENSFCAG00000044577	CMSS1	100	91.398	ENSRBIG00000037931	CMSS1	100	91.398	Rhinopithecus_bieti
ENSFCAG00000044577	CMSS1	100	91.398	ENSRROG00000042910	CMSS1	100	91.398	Rhinopithecus_roxellana
ENSFCAG00000044577	CMSS1	100	86.786	ENSSBOG00000030980	CMSS1	99	92.664	Saimiri_boliviensis_boliviensis
ENSFCAG00000044577	CMSS1	89	76.587	ENSSHAG00000009321	CMSS1	99	76.587	Sarcophilus_harrisii
ENSFCAG00000044577	CMSS1	100	54.054	ENSSFOG00015001509	cmss1	100	55.517	Scleropages_formosus
ENSFCAG00000044577	CMSS1	100	54.452	ENSSMAG00000001653	cmss1	100	53.952	Scophthalmus_maximus
ENSFCAG00000044577	CMSS1	100	53.952	ENSSDUG00000007719	cmss1	100	55.479	Seriola_dumerili
ENSFCAG00000044577	CMSS1	74	64.734	ENSSLDG00000012300	cmss1	98	51.250	Seriola_lalandi_dorsalis
ENSFCAG00000044577	CMSS1	100	76.429	ENSSARG00000003584	CMSS1	100	76.429	Sorex_araneus
ENSFCAG00000044577	CMSS1	81	71.239	ENSSPUG00000003865	CMSS1	100	71.239	Sphenodon_punctatus
ENSFCAG00000044577	CMSS1	74	65.049	ENSSPAG00000019182	cmss1	82	55.431	Stegastes_partitus
ENSFCAG00000044577	CMSS1	100	95.341	ENSSSCG00000011970	CMSS1	100	95.341	Sus_scrofa
ENSFCAG00000044577	CMSS1	82	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSFCAG00000044577	CMSS1	100	51.761	ENSTRUG00000015265	cmss1	100	52.465	Takifugu_rubripes
ENSFCAG00000044577	CMSS1	72	56.436	ENSTNIG00000002880	cmss1	72	56.000	Tetraodon_nigroviridis
ENSFCAG00000044577	CMSS1	100	63.214	ENSTBEG00000016722	CMSS1	100	63.214	Tupaia_belangeri
ENSFCAG00000044577	CMSS1	100	91.398	ENSTTRG00000001562	CMSS1	100	91.398	Tursiops_truncatus
ENSFCAG00000044577	CMSS1	97	92.336	ENSUAMG00000024209	CMSS1	100	97.309	Ursus_americanus
ENSFCAG00000044577	CMSS1	93	94.981	ENSUMAG00000001983	CMSS1	99	94.574	Ursus_maritimus
ENSFCAG00000044577	CMSS1	100	70.251	ENSVPAG00000000263	CMSS1	100	70.251	Vicugna_pacos
ENSFCAG00000044577	CMSS1	88	95.935	ENSVVUG00000021647	-	100	95.935	Vulpes_vulpes
ENSFCAG00000044577	CMSS1	78	96.774	ENSVVUG00000007776	-	85	96.774	Vulpes_vulpes
ENSFCAG00000044577	CMSS1	100	57.394	ENSXETG00000011858	cmss1	100	57.394	Xenopus_tropicalis
ENSFCAG00000044577	CMSS1	75	63.462	ENSXCOG00000018724	cmss1	68	63.500	Xiphophorus_couchianus
ENSFCAG00000044577	CMSS1	75	63.462	ENSXMAG00000011243	cmss1	75	63.500	Xiphophorus_maculatus