EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000044961 (Gene tree)
Gene ID: 101100021
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 167044 bases
Position: chrE3:32340066-32507109
Accession: 101100021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000049933	R3H	PF01424.22	4.4e-05	1	1
ENSFCAP00000045755	R3H	PF01424.22	4.9e-05	1	1
ENSFCAP00000040289	RNA_bind	PF08675.11	1.8e-33	1	1
ENSFCAP00000049933	RNA_bind	PF08675.11	2.5e-33	1	1
ENSFCAP00000045755	RNA_bind	PF08675.11	2.7e-33	1	1
ENSFCAP00000045755	CAF1	PF04857.20	3.8e-89	1	1
ENSFCAP00000049933	CAF1	PF04857.20	9e-68	1	2
ENSFCAP00000049933	CAF1	PF04857.20	9e-68	2	2
ENSFCAP00000040289	CAF1	PF04857.20	5.5e-52	1	2
ENSFCAP00000040289	CAF1	PF04857.20	5.5e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000064136	PARN-202	1779	-	ENSFCAP00000049933	592 (aa)	-	UPI000DE7C421
ENSFCAT00000060826	PARN-203	1392	-	ENSFCAP00000040289	463 (aa)	-	UPI000DE7DA3C
ENSFCAT00000065860	PARN-201	3082	XM_023247035	ENSFCAP00000045755	638 (aa)	XP_023102803	UPI000298C756

Gene Model

Click here to download ENSFCAG00000044961's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000044961's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000044961	PARN	100	96.610	ENSG00000140694	PARN	100	96.610	Homo_sapiens
ENSFCAG00000044961	PARN	100	96.610	ENSAMEG00000011208	PARN	100	95.931	Ailuropoda_melanoleuca
ENSFCAG00000044961	PARN	83	75.933	ENSACIG00000000619	parn	83	75.933	Amphilophus_citrinellus
ENSFCAG00000044961	PARN	83	78.464	ENSAOCG00000003465	parn	78	78.464	Amphiprion_ocellaris
ENSFCAG00000044961	PARN	74	78.224	ENSAPEG00000010661	parn	91	78.224	Amphiprion_percula
ENSFCAG00000044961	PARN	83	79.478	ENSATEG00000004661	parn	78	79.478	Anabas_testudineus
ENSFCAG00000044961	PARN	99	83.254	ENSAPLG00000013914	PARN	99	83.254	Anas_platyrhynchos
ENSFCAG00000044961	PARN	100	88.136	ENSACAG00000004973	PARN	100	78.714	Anolis_carolinensis
ENSFCAG00000044961	PARN	100	96.610	ENSANAG00000031516	PARN	100	96.610	Aotus_nancymaae
ENSFCAG00000044961	PARN	90	74.443	ENSACLG00000004742	parn	79	79.401	Astatotilapia_calliptera
ENSFCAG00000044961	PARN	88	77.966	ENSAMXG00000012390	parn	94	71.062	Astyanax_mexicanus
ENSFCAG00000044961	PARN	100	98.305	ENSBTAG00000018097	PARN	100	94.627	Bos_taurus
ENSFCAG00000044961	PARN	100	96.610	ENSCJAG00000015866	PARN	100	96.610	Callithrix_jacchus
ENSFCAG00000044961	PARN	100	96.082	ENSCAFG00000018795	PARN	100	96.082	Canis_familiaris
ENSFCAG00000044961	PARN	100	96.610	ENSCAFG00020024126	PARN	100	96.082	Canis_lupus_dingo
ENSFCAG00000044961	PARN	100	98.305	ENSCHIG00000018143	PARN	100	95.141	Capra_hircus
ENSFCAG00000044961	PARN	73	62.370	ENSCAPG00000007984	PARN	78	62.370	Cavia_aperea
ENSFCAG00000044961	PARN	100	94.915	ENSCPOG00000002263	PARN	100	90.125	Cavia_porcellus
ENSFCAG00000044961	PARN	100	96.610	ENSCCAG00000030367	PARN	100	96.610	Cebus_capucinus
ENSFCAG00000044961	PARN	90	97.363	ENSCATG00000041368	PARN	100	97.363	Cercocebus_atys
ENSFCAG00000044961	PARN	52	35.862	ENSCATG00000033196	PNLDC1	70	36.111	Cercocebus_atys
ENSFCAG00000044961	PARN	100	93.220	ENSCLAG00000015406	PARN	99	90.596	Chinchilla_lanigera
ENSFCAG00000044961	PARN	100	96.610	ENSCSAG00000008142	PARN	100	93.740	Chlorocebus_sabaeus
ENSFCAG00000044961	PARN	98	98.077	ENSCHOG00000007014	PARN	100	77.813	Choloepus_hoffmanni
ENSFCAG00000044961	PARN	90	84.803	ENSCPBG00000006609	PARN	97	85.556	Chrysemys_picta_bellii
ENSFCAG00000044961	PARN	80	44.090	ENSCING00000010142	-	99	44.090	Ciona_intestinalis
ENSFCAG00000044961	PARN	100	96.610	ENSCANG00000028849	-	100	96.610	Colobus_angolensis_palliatus
ENSFCAG00000044961	PARN	74	30.103	ENSCGRG00001007470	-	86	30.103	Cricetulus_griseus_chok1gshd
ENSFCAG00000044961	PARN	100	96.610	ENSCGRG00001012096	Parn	100	85.023	Cricetulus_griseus_chok1gshd
ENSFCAG00000044961	PARN	100	96.610	ENSCGRG00000004939	Parn	100	85.023	Cricetulus_griseus_crigri
ENSFCAG00000044961	PARN	74	30.103	ENSCGRG00000010221	-	86	30.103	Cricetulus_griseus_crigri
ENSFCAG00000044961	PARN	99	79.245	ENSCSEG00000002064	parn	100	64.253	Cynoglossus_semilaevis
ENSFCAG00000044961	PARN	83	77.985	ENSCVAG00000014848	parn	79	77.985	Cyprinodon_variegatus
ENSFCAG00000044961	PARN	100	63.174	ENSDARG00000102634	parn	100	59.259	Danio_rerio
ENSFCAG00000044961	PARN	100	98.305	ENSDNOG00000000833	PARN	98	96.583	Dasypus_novemcinctus
ENSFCAG00000044961	PARN	74	93.916	ENSETEG00000014828	-	78	93.916	Echinops_telfairi
ENSFCAG00000044961	PARN	56	30.372	ENSEBUG00000008118	PNLDC1	61	30.372	Eptatretus_burgeri
ENSFCAG00000044961	PARN	100	98.305	ENSEASG00005011400	PARN	100	94.828	Equus_asinus_asinus
ENSFCAG00000044961	PARN	100	96.610	ENSECAG00000017792	PARN	100	94.671	Equus_caballus
ENSFCAG00000044961	PARN	86	84.163	ENSEEUG00000010370	PARN	77	94.444	Erinaceus_europaeus
ENSFCAG00000044961	PARN	89	77.966	ENSELUG00000013139	parn	77	71.477	Esox_lucius
ENSFCAG00000044961	PARN	98	86.538	ENSFALG00000003911	PARN	98	82.884	Ficedula_albicollis
ENSFCAG00000044961	PARN	58	31.579	ENSFALG00000012081	PNLDC1	70	31.579	Ficedula_albicollis
ENSFCAG00000044961	PARN	100	94.915	ENSFDAG00000009234	PARN	100	90.125	Fukomys_damarensis
ENSFCAG00000044961	PARN	89	76.271	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSFCAG00000044961	PARN	83	76.119	ENSGMOG00000003231	parn	97	76.119	Gadus_morhua
ENSFCAG00000044961	PARN	100	89.831	ENSGALG00000003091	PARN	100	82.288	Gallus_gallus
ENSFCAG00000044961	PARN	86	77.966	ENSGAFG00000011061	parn	84	71.906	Gambusia_affinis
ENSFCAG00000044961	PARN	100	72.881	ENSGACG00000019501	parn	100	68.168	Gasterosteus_aculeatus
ENSFCAG00000044961	PARN	70	79.331	ENSGAGG00000023281	PARN	83	79.331	Gopherus_agassizii
ENSFCAG00000044961	PARN	96	96.610	ENSGGOG00000025224	PARN	100	96.610	Gorilla_gorilla
ENSFCAG00000044961	PARN	83	79.401	ENSHBUG00000017906	parn	90	77.281	Haplochromis_burtoni
ENSFCAG00000044961	PARN	100	94.915	ENSHGLG00000010886	PARN	100	89.969	Heterocephalus_glaber_female
ENSFCAG00000044961	PARN	100	94.915	ENSHGLG00100014659	PARN	100	89.969	Heterocephalus_glaber_male
ENSFCAG00000044961	PARN	82	73.157	ENSHCOG00000008683	parn	91	73.157	Hippocampus_comes
ENSFCAG00000044961	PARN	100	67.797	ENSIPUG00000012401	parn	84	62.762	Ictalurus_punctatus
ENSFCAG00000044961	PARN	100	100.000	ENSSTOG00000007519	PARN	100	92.790	Ictidomys_tridecemlineatus
ENSFCAG00000044961	PARN	100	98.305	ENSJJAG00000023049	Parn	100	88.871	Jaculus_jaculus
ENSFCAG00000044961	PARN	83	78.545	ENSKMAG00000009462	parn	79	78.545	Kryptolebias_marmoratus
ENSFCAG00000044961	PARN	89	76.271	ENSLBEG00000009167	parn	90	72.007	Labrus_bergylta
ENSFCAG00000044961	PARN	79	78.968	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSFCAG00000044961	PARN	89	79.661	ENSLOCG00000000715	parn	85	74.660	Lepisosteus_oculatus
ENSFCAG00000044961	PARN	100	98.305	ENSLAFG00000015036	PARN	100	93.417	Loxodonta_africana
ENSFCAG00000044961	PARN	100	96.610	ENSMFAG00000044852	PARN	100	96.610	Macaca_fascicularis
ENSFCAG00000044961	PARN	100	96.610	ENSMMUG00000018849	PARN	100	96.610	Macaca_mulatta
ENSFCAG00000044961	PARN	100	96.610	ENSMNEG00000045108	PARN	100	96.610	Macaca_nemestrina
ENSFCAG00000044961	PARN	100	96.610	ENSMLEG00000031743	PARN	100	96.610	Mandrillus_leucophaeus
ENSFCAG00000044961	PARN	83	77.985	ENSMAMG00000006939	parn	84	72.315	Mastacembelus_armatus
ENSFCAG00000044961	PARN	87	76.271	ENSMZEG00005013590	parn	98	72.727	Maylandia_zebra
ENSFCAG00000044961	PARN	94	96.552	ENSMGAG00000001004	PARN	95	82.401	Meleagris_gallopavo
ENSFCAG00000044961	PARN	95	91.429	ENSMAUG00000008025	Parn	100	79.199	Mesocricetus_auratus
ENSFCAG00000044961	PARN	100	98.305	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSFCAG00000044961	PARN	77	91.093	ENSMOCG00000022211	Parn	100	91.093	Microtus_ochrogaster
ENSFCAG00000044961	PARN	83	76.262	ENSMMOG00000011333	parn	87	76.262	Mola_mola
ENSFCAG00000044961	PARN	77	94.153	ENSMODG00000004915	PARN	99	94.153	Monodelphis_domestica
ENSFCAG00000044961	PARN	83	78.771	ENSMALG00000019426	parn	91	78.771	Monopterus_albus
ENSFCAG00000044961	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	85.737	Mus_caroli
ENSFCAG00000044961	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSFCAG00000044961	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	85.580	Mus_pahari
ENSFCAG00000044961	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	85.580	Mus_spretus
ENSFCAG00000044961	PARN	100	98.305	ENSMPUG00000014464	PARN	100	95.768	Mustela_putorius_furo
ENSFCAG00000044961	PARN	77	94.737	ENSMLUG00000005414	PARN	100	94.737	Myotis_lucifugus
ENSFCAG00000044961	PARN	87	76.271	ENSNBRG00000006805	parn	98	72.193	Neolamprologus_brichardi
ENSFCAG00000044961	PARN	100	96.610	ENSNLEG00000010241	PARN	100	96.610	Nomascus_leucogenys
ENSFCAG00000044961	PARN	93	94.231	ENSMEUG00000008178	-	68	94.231	Notamacropus_eugenii
ENSFCAG00000044961	PARN	98	98.077	ENSOPRG00000012187	PARN	100	86.688	Ochotona_princeps
ENSFCAG00000044961	PARN	100	94.915	ENSODEG00000001617	PARN	100	81.903	Octodon_degus
ENSFCAG00000044961	PARN	100	76.271	ENSONIG00000000151	parn	100	69.479	Oreochromis_niloticus
ENSFCAG00000044961	PARN	82	83.684	ENSOANG00000020155	-	97	84.252	Ornithorhynchus_anatinus
ENSFCAG00000044961	PARN	99	91.654	ENSOCUG00000000322	PARN	100	91.654	Oryctolagus_cuniculus
ENSFCAG00000044961	PARN	86	77.966	ENSORLG00020010313	parn	85	72.712	Oryzias_latipes_hni
ENSFCAG00000044961	PARN	86	77.966	ENSORLG00015000300	parn	85	72.712	Oryzias_latipes_hsok
ENSFCAG00000044961	PARN	89	77.966	ENSOMEG00000019555	parn	97	66.968	Oryzias_melastigma
ENSFCAG00000044961	PARN	77	93.939	ENSOGAG00000014626	PARN	100	93.939	Otolemur_garnettii
ENSFCAG00000044961	PARN	77	97.976	ENSOARG00000007574	PARN	100	97.976	Ovis_aries
ENSFCAG00000044961	PARN	100	96.610	ENSPPAG00000031438	PARN	100	96.610	Pan_paniscus
ENSFCAG00000044961	PARN	100	100.000	ENSPPRG00000018583	PARN	100	100.000	Panthera_pardus
ENSFCAG00000044961	PARN	100	100.000	ENSPTIG00000012135	PARN	100	100.000	Panthera_tigris_altaica
ENSFCAG00000044961	PARN	100	96.610	ENSPTRG00000007792	PARN	100	96.610	Pan_troglodytes
ENSFCAG00000044961	PARN	100	96.610	ENSPANG00000020099	PARN	100	96.610	Papio_anubis
ENSFCAG00000044961	PARN	98	77.966	ENSPKIG00000022807	parn	99	65.211	Paramormyrops_kingsleyae
ENSFCAG00000044961	PARN	97	88.136	ENSPSIG00000014804	PARN	100	83.793	Pelodiscus_sinensis
ENSFCAG00000044961	PARN	80	76.848	ENSPMGG00000014431	parn	77	73.466	Periophthalmus_magnuspinnatus
ENSFCAG00000044961	PARN	100	94.915	ENSPEMG00000018439	Parn	100	83.699	Peromyscus_maniculatus_bairdii
ENSFCAG00000044961	PARN	80	68.217	ENSPMAG00000003956	parn	98	68.217	Petromyzon_marinus
ENSFCAG00000044961	PARN	66	86.525	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSFCAG00000044961	PARN	83	77.799	ENSPFOG00000012823	parn	84	71.812	Poecilia_formosa
ENSFCAG00000044961	PARN	83	77.985	ENSPLAG00000006395	parn	84	71.980	Poecilia_latipinna
ENSFCAG00000044961	PARN	83	77.985	ENSPMEG00000007711	parn	84	71.980	Poecilia_mexicana
ENSFCAG00000044961	PARN	83	77.612	ENSPREG00000000147	parn	84	71.644	Poecilia_reticulata
ENSFCAG00000044961	PARN	100	94.915	ENSPPYG00000007123	PARN	100	93.136	Pongo_abelii
ENSFCAG00000044961	PARN	93	100.000	ENSPCAG00000001741	PARN	100	82.645	Procavia_capensis
ENSFCAG00000044961	PARN	100	98.305	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSFCAG00000044961	PARN	98	98.077	ENSPVAG00000002547	PARN	100	90.491	Pteropus_vampyrus
ENSFCAG00000044961	PARN	87	76.271	ENSPNYG00000006835	parn	98	70.205	Pundamilia_nyererei
ENSFCAG00000044961	PARN	82	74.715	ENSPNAG00000018905	parn	84	74.715	Pygocentrus_nattereri
ENSFCAG00000044961	PARN	100	94.915	ENSRNOG00000002912	Parn	98	85.859	Rattus_norvegicus
ENSFCAG00000044961	PARN	72	89.790	ENSRBIG00000018726	PARN	100	89.790	Rhinopithecus_bieti
ENSFCAG00000044961	PARN	72	89.790	ENSRROG00000011162	-	100	89.790	Rhinopithecus_roxellana
ENSFCAG00000044961	PARN	100	96.610	ENSSBOG00000034726	PARN	100	96.610	Saimiri_boliviensis_boliviensis
ENSFCAG00000044961	PARN	62	30.318	ENSSHAG00000015192	PNLDC1	65	30.318	Sarcophilus_harrisii
ENSFCAG00000044961	PARN	66	93.301	ENSSHAG00000008493	PARN	94	93.301	Sarcophilus_harrisii
ENSFCAG00000044961	PARN	94	77.966	ENSSFOG00015014165	parn	96	71.644	Scleropages_formosus
ENSFCAG00000044961	PARN	83	76.119	ENSSMAG00000000685	parn	100	62.866	Scophthalmus_maximus
ENSFCAG00000044961	PARN	86	75.812	ENSSDUG00000014555	parn	80	75.812	Seriola_dumerili
ENSFCAG00000044961	PARN	91	80.656	ENSSARG00000014339	PARN	100	80.656	Sorex_araneus
ENSFCAG00000044961	PARN	100	88.136	ENSSPUG00000007719	PARN	100	84.639	Sphenodon_punctatus
ENSFCAG00000044961	PARN	91	74.194	ENSSPAG00000007095	parn	86	74.532	Stegastes_partitus
ENSFCAG00000044961	PARN	100	98.305	ENSSSCG00000007878	PARN	89	93.730	Sus_scrofa
ENSFCAG00000044961	PARN	99	85.185	ENSTGUG00000004971	PARN	99	82.938	Taeniopygia_guttata
ENSFCAG00000044961	PARN	55	31.476	ENSTGUG00000011418	PNLDC1	68	31.476	Taeniopygia_guttata
ENSFCAG00000044961	PARN	100	77.966	ENSTNIG00000008252	parn	100	68.576	Tetraodon_nigroviridis
ENSFCAG00000044961	PARN	91	78.929	ENSTBEG00000010407	PARN	100	78.929	Tupaia_belangeri
ENSFCAG00000044961	PARN	98	98.077	ENSTTRG00000002843	PARN	100	90.016	Tursiops_truncatus
ENSFCAG00000044961	PARN	68	85.092	ENSUAMG00000008283	PARN	90	85.092	Ursus_americanus
ENSFCAG00000044961	PARN	100	98.305	ENSUMAG00000004527	PARN	100	96.395	Ursus_maritimus
ENSFCAG00000044961	PARN	95	98.077	ENSVPAG00000008968	PARN	100	91.531	Vicugna_pacos
ENSFCAG00000044961	PARN	100	96.610	ENSVVUG00000019509	PARN	100	96.552	Vulpes_vulpes
ENSFCAG00000044961	PARN	100	80.328	ENSXETG00000010994	parn	100	82.890	Xenopus_tropicalis
ENSFCAG00000044961	PARN	86	77.966	ENSXCOG00000015990	parn	96	68.519	Xiphophorus_couchianus
ENSFCAG00000044961	PARN	89	77.966	ENSXMAG00000014783	parn	84	72.222	Xiphophorus_maculatus