EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFCAG00000045269 (Gene tree)
Gene ID: 101099931
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 6088 bases
Position: chrF1:71200420-71206507
Accession: 101099931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000050369	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000054199	-	2857	XM_003999761	ENSFCAP00000050369	203 (aa)	XP_003999810	UPI0000F5B084

Gene Model

Click here to download ENSFCAG00000045269's gene model file

Pathways

Pathway ID	Pathway Name	Source
fca04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000045269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFCAG00000045269	-	84	50.581	ENSFCAG00000027710	RAB12	51	50.581
ENSFCAG00000045269	-	87	41.711	ENSFCAG00000032091	RAB33A	79	41.711
ENSFCAG00000045269	-	79	39.506	ENSFCAG00000002990	HRAS	98	36.111
ENSFCAG00000045269	-	80	30.000	ENSFCAG00000045595	RASL11B	68	30.000
ENSFCAG00000045269	-	79	36.810	ENSFCAG00000026623	MRAS	78	36.810
ENSFCAG00000045269	-	78	43.671	ENSFCAG00000023834	RAB6A	76	43.671
ENSFCAG00000045269	-	79	31.176	ENSFCAG00000006749	RASL11A	70	31.176
ENSFCAG00000045269	-	99	32.836	ENSFCAG00000012724	RAB17	94	32.836
ENSFCAG00000045269	-	80	41.071	ENSFCAG00000000424	RAB9B	83	41.071
ENSFCAG00000045269	-	81	38.788	ENSFCAG00000044358	RAB23	69	38.788
ENSFCAG00000045269	-	86	38.919	ENSFCAG00000003937	RAB34	71	38.919
ENSFCAG00000045269	-	79	38.272	ENSFCAG00000037994	NRAS	85	38.272
ENSFCAG00000045269	-	86	46.067	ENSFCAG00000038920	RAB39B	84	46.067
ENSFCAG00000045269	-	84	54.706	ENSFCAG00000045693	RAB15	80	54.706
ENSFCAG00000045269	-	86	42.614	ENSFCAG00000027161	RAB18	93	41.667
ENSFCAG00000045269	-	67	30.147	ENSFCAG00000005482	ARF5	72	30.147
ENSFCAG00000045269	-	95	40.625	ENSFCAG00000039795	-	89	40.625
ENSFCAG00000045269	-	91	54.891	ENSFCAG00000036658	RAB1B	92	54.891
ENSFCAG00000045269	-	93	39.303	ENSFCAG00000011775	RAB25	94	39.303
ENSFCAG00000045269	-	57	30.508	ENSFCAG00000045027	-	58	30.508
ENSFCAG00000045269	-	78	30.380	ENSFCAG00000033642	-	69	30.380
ENSFCAG00000045269	-	91	36.702	ENSFCAG00000046416	RAB22A	97	36.702
ENSFCAG00000045269	-	78	39.506	ENSFCAG00000002048	RAB36	50	39.506
ENSFCAG00000045269	-	95	37.000	ENSFCAG00000023992	RAB9A	97	37.000
ENSFCAG00000045269	-	81	47.879	ENSFCAG00000030174	RAB11A	76	47.879
ENSFCAG00000045269	-	80	49.383	ENSFCAG00000014416	RAB30	80	49.383
ENSFCAG00000045269	-	90	33.333	ENSFCAG00000029875	RERG	93	33.333
ENSFCAG00000045269	-	81	47.879	ENSFCAG00000015216	RAB11B	76	47.879
ENSFCAG00000045269	-	80	38.323	ENSFCAG00000022971	-	81	38.323
ENSFCAG00000045269	-	83	48.214	ENSFCAG00000007745	RAB2B	78	48.214
ENSFCAG00000045269	-	79	39.130	ENSFCAG00000044912	RAB31	83	39.130
ENSFCAG00000045269	-	79	39.881	ENSFCAG00000037124	-	77	39.881
ENSFCAG00000045269	-	89	42.246	ENSFCAG00000026542	RAB14	87	42.246
ENSFCAG00000045269	-	57	34.454	ENSFCAG00000004686	ARL14	59	34.454
ENSFCAG00000045269	-	83	30.114	ENSFCAG00000038919	DNAJC27	90	30.189
ENSFCAG00000045269	-	79	40.123	ENSFCAG00000026808	KRAS	85	40.123
ENSFCAG00000045269	-	78	43.038	ENSFCAG00000040897	RAB6B	76	43.038
ENSFCAG00000045269	-	90	55.435	ENSFCAG00000002536	RAB1A	90	55.435
ENSFCAG00000045269	-	84	54.706	ENSFCAG00000032566	RAB35	91	55.396
ENSFCAG00000045269	-	95	39.062	ENSFCAG00000002148	RAB5C	89	39.062
ENSFCAG00000045269	-	57	30.508	ENSFCAG00000009907	-	58	30.508
ENSFCAG00000045269	-	83	47.929	ENSFCAG00000024352	RAB2A	80	47.929
ENSFCAG00000045269	-	81	32.121	ENSFCAG00000012862	RHEB	87	32.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000045269	-	100	92.118	ENSG00000143545	RAB13	100	92.118	Homo_sapiens
ENSFCAG00000045269	-	99	74.129	ENSACIG00000008584	rab13	97	74.129	Amphilophus_citrinellus
ENSFCAG00000045269	-	100	91.626	ENSANAG00000030247	-	100	91.626	Aotus_nancymaae
ENSFCAG00000045269	-	99	78.218	ENSAMXG00000030712	rab13	99	78.218	Astyanax_mexicanus
ENSFCAG00000045269	-	100	90.640	ENSBTAG00000017604	RAB13	100	90.640	Bos_taurus
ENSFCAG00000045269	-	80	46.012	WBGene00019317	K02E10.1	75	46.012	Caenorhabditis_elegans
ENSFCAG00000045269	-	100	92.118	ENSCJAG00000009933	-	100	92.118	Callithrix_jacchus
ENSFCAG00000045269	-	100	90.148	ENSCHIG00000022271	-	100	90.148	Capra_hircus
ENSFCAG00000045269	-	99	88.614	ENSCPOG00000011491	-	99	88.614	Cavia_porcellus
ENSFCAG00000045269	-	100	91.626	ENSCCAG00000028502	-	100	91.626	Cebus_capucinus
ENSFCAG00000045269	-	100	92.118	ENSCATG00000041779	-	100	92.118	Cercocebus_atys
ENSFCAG00000045269	-	100	88.670	ENSCLAG00000006603	-	100	88.670	Chinchilla_lanigera
ENSFCAG00000045269	-	100	92.118	ENSCANG00000036573	-	100	92.118	Colobus_angolensis_palliatus
ENSFCAG00000045269	-	100	89.655	ENSCGRG00001021505	Rab13	100	89.655	Cricetulus_griseus_chok1gshd
ENSFCAG00000045269	-	100	89.655	ENSCGRG00000012126	Rab13	100	89.655	Cricetulus_griseus_crigri
ENSFCAG00000045269	-	99	75.490	ENSCSEG00000002358	rab13	99	75.490	Cynoglossus_semilaevis
ENSFCAG00000045269	-	99	79.208	ENSDARG00000034771	rab13	99	79.208	Danio_rerio
ENSFCAG00000045269	-	100	90.640	ENSDORG00000001591	Rab13	100	90.640	Dipodomys_ordii
ENSFCAG00000045269	-	100	91.626	ENSEASG00005000683	-	100	91.626	Equus_asinus_asinus
ENSFCAG00000045269	-	100	91.626	ENSECAG00000016551	RAB13	100	91.626	Equus_caballus
ENSFCAG00000045269	-	99	86.139	ENSEEUG00000001233	-	99	86.139	Erinaceus_europaeus
ENSFCAG00000045269	-	99	75.862	ENSELUG00000012801	rab13	99	75.862	Esox_lucius
ENSFCAG00000045269	-	65	94.697	ENSFDAG00000014469	-	100	94.697	Fukomys_damarensis
ENSFCAG00000045269	-	99	74.257	ENSFHEG00000021221	rab13	95	84.393	Fundulus_heteroclitus
ENSFCAG00000045269	-	99	74.752	ENSGACG00000011925	rab13	99	74.752	Gasterosteus_aculeatus
ENSFCAG00000045269	-	85	88.439	ENSGAGG00000000742	-	99	80.296	Gopherus_agassizii
ENSFCAG00000045269	-	100	92.118	ENSGGOG00000023693	RAB13	100	92.118	Gorilla_gorilla
ENSFCAG00000045269	-	100	88.177	ENSHGLG00000008749	RAB13	100	88.177	Heterocephalus_glaber_female
ENSFCAG00000045269	-	100	88.177	ENSHGLG00100013608	RAB13	100	88.177	Heterocephalus_glaber_male
ENSFCAG00000045269	-	99	71.569	ENSHCOG00000007440	rab13	97	83.523	Hippocampus_comes
ENSFCAG00000045269	-	99	76.500	ENSIPUG00000003199	rab13	99	76.500	Ictalurus_punctatus
ENSFCAG00000045269	-	100	91.626	ENSSTOG00000011222	-	100	91.626	Ictidomys_tridecemlineatus
ENSFCAG00000045269	-	100	89.655	ENSJJAG00000010575	Rab13	100	89.655	Jaculus_jaculus
ENSFCAG00000045269	-	99	74.000	ENSKMAG00000001908	rab13	99	74.000	Kryptolebias_marmoratus
ENSFCAG00000045269	-	99	75.500	ENSLBEG00000026779	rab13	99	75.500	Labrus_bergylta
ENSFCAG00000045269	-	85	77.326	ENSLACG00000008103	-	97	77.326	Latimeria_chalumnae
ENSFCAG00000045269	-	100	92.118	ENSMFAG00000041018	RAB13	100	92.118	Macaca_fascicularis
ENSFCAG00000045269	-	100	92.118	ENSMNEG00000028951	-	100	92.118	Macaca_nemestrina
ENSFCAG00000045269	-	100	92.118	ENSMLEG00000042247	-	100	92.118	Mandrillus_leucophaeus
ENSFCAG00000045269	-	99	74.752	ENSMAMG00000014602	rab13	99	74.752	Mastacembelus_armatus
ENSFCAG00000045269	-	100	88.177	ENSMAUG00000015713	Rab13	100	88.177	Mesocricetus_auratus
ENSFCAG00000045269	-	100	90.148	ENSMICG00000010340	-	100	90.148	Microcebus_murinus
ENSFCAG00000045269	-	100	89.163	ENSMOCG00000021448	Rab13	100	89.163	Microtus_ochrogaster
ENSFCAG00000045269	-	99	89.109	ENSMODG00000017295	-	84	89.109	Monodelphis_domestica
ENSFCAG00000045269	-	100	87.192	MGP_CAROLIEiJ_G0025227	Rab13	100	87.192	Mus_caroli
ENSFCAG00000045269	-	100	86.700	ENSMUSG00000027935	Rab13	100	86.700	Mus_musculus
ENSFCAG00000045269	-	99	87.129	MGP_PahariEiJ_G0026671	Rab13	99	87.129	Mus_pahari
ENSFCAG00000045269	-	100	89.655	ENSNGAG00000010309	Rab13	100	89.655	Nannospalax_galili
ENSFCAG00000045269	-	99	74.146	ENSNBRG00000004124	rab13	99	74.146	Neolamprologus_brichardi
ENSFCAG00000045269	-	100	92.118	ENSNLEG00000028944	-	100	92.118	Nomascus_leucogenys
ENSFCAG00000045269	-	100	88.725	ENSMEUG00000009667	-	100	88.725	Notamacropus_eugenii
ENSFCAG00000045269	-	63	96.850	ENSODEG00000012634	-	100	96.850	Octodon_degus
ENSFCAG00000045269	-	100	86.700	ENSODEG00000010443	-	100	86.700	Octodon_degus
ENSFCAG00000045269	-	99	75.248	ENSONIG00000006340	rab13	99	75.248	Oreochromis_niloticus
ENSFCAG00000045269	-	88	94.944	ENSOCUG00000006286	-	100	94.944	Oryctolagus_cuniculus
ENSFCAG00000045269	-	98	76.884	ENSOMEG00000008210	rab13	99	75.490	Oryzias_melastigma
ENSFCAG00000045269	-	99	89.109	ENSOGAG00000016969	-	99	89.109	Otolemur_garnettii
ENSFCAG00000045269	-	100	92.118	ENSPPAG00000028435	-	100	92.118	Pan_paniscus
ENSFCAG00000045269	-	100	99.507	ENSPPRG00000008865	-	100	99.507	Panthera_pardus
ENSFCAG00000045269	-	100	92.118	ENSPTRG00000001370	RAB13	100	92.118	Pan_troglodytes
ENSFCAG00000045269	-	100	92.118	ENSPANG00000004479	-	100	92.118	Papio_anubis
ENSFCAG00000045269	-	99	75.248	ENSPMGG00000007680	rab13	99	75.248	Periophthalmus_magnuspinnatus
ENSFCAG00000045269	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSFCAG00000045269	-	100	89.216	ENSPCIG00000029350	-	100	89.216	Phascolarctos_cinereus
ENSFCAG00000045269	-	85	82.659	ENSPLAG00000005832	RAB13	93	82.659	Poecilia_latipinna
ENSFCAG00000045269	-	85	82.659	ENSPREG00000017567	rab13	99	73.762	Poecilia_reticulata
ENSFCAG00000045269	-	100	92.118	ENSPPYG00000000790	-	100	92.118	Pongo_abelii
ENSFCAG00000045269	-	100	91.133	ENSPCOG00000012189	-	100	91.133	Propithecus_coquereli
ENSFCAG00000045269	-	100	91.133	ENSPVAG00000011095	-	100	91.133	Pteropus_vampyrus
ENSFCAG00000045269	-	87	83.523	ENSPNAG00000004189	rab13	93	83.523	Pygocentrus_nattereri
ENSFCAG00000045269	-	100	88.670	ENSRNOG00000016733	Rab13	100	88.670	Rattus_norvegicus
ENSFCAG00000045269	-	100	92.118	ENSRBIG00000008552	-	100	92.118	Rhinopithecus_bieti
ENSFCAG00000045269	-	100	92.118	ENSRROG00000036885	-	100	92.118	Rhinopithecus_roxellana
ENSFCAG00000045269	-	100	91.626	ENSSBOG00000020342	-	100	91.626	Saimiri_boliviensis_boliviensis
ENSFCAG00000045269	-	100	88.725	ENSSHAG00000011866	-	100	88.725	Sarcophilus_harrisii
ENSFCAG00000045269	-	100	91.626	ENSSSCG00000006564	-	100	91.626	Sus_scrofa
ENSFCAG00000045269	-	99	75.490	ENSTRUG00000024177	rab13	99	75.490	Takifugu_rubripes
ENSFCAG00000045269	-	100	90.640	ENSTBEG00000012734	-	100	90.640	Tupaia_belangeri
ENSFCAG00000045269	-	100	92.611	ENSTTRG00000011183	-	100	92.611	Tursiops_truncatus
ENSFCAG00000045269	-	70	78.322	ENSXETG00000020729	rab13	99	73.913	Xenopus_tropicalis
ENSFCAG00000045269	-	85	82.081	ENSXCOG00000019533	rab13	93	82.081	Xiphophorus_couchianus