EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFCAG00000045432 (Gene tree)
Gene ID: 101095948
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Felis_catus
Status: putative
Strand: Plus strand
Length: 38457 bases
Position: chrA1:139323969-139362425
Accession: 101095948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFCAP00000041202	MRP-S27	PF10037.9	4.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFCAT00000066694	PTCD2-201	6881	XM_006927785	ENSFCAP00000041202	427 (aa)	XP_006927847	UPI000DE7D3BD
ENSFCAT00000005456	PTCD2-202	651	-	ENSFCAP00000005057	216 (aa)	-	M3W430

Gene Model

Click here to download ENSFCAG00000045432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFCAG00000045432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFCAG00000045432	PTCD2	83	73.902	ENSG00000049883	PTCD2	100	82.759	Homo_sapiens
ENSFCAG00000045432	PTCD2	74	47.302	ENSAPOG00000020682	ptcd2	82	47.302	Acanthochromis_polyacanthus
ENSFCAG00000045432	PTCD2	84	78.351	ENSAMEG00000007194	PTCD2	100	78.351	Ailuropoda_melanoleuca
ENSFCAG00000045432	PTCD2	73	44.164	ENSACIG00000002053	ptcd2	94	44.164	Amphilophus_citrinellus
ENSFCAG00000045432	PTCD2	74	46.667	ENSAOCG00000006616	ptcd2	81	46.667	Amphiprion_ocellaris
ENSFCAG00000045432	PTCD2	74	46.667	ENSAPEG00000022926	ptcd2	81	46.667	Amphiprion_percula
ENSFCAG00000045432	PTCD2	85	52.658	ENSACAG00000009747	PTCD2	99	52.658	Anolis_carolinensis
ENSFCAG00000045432	PTCD2	83	73.643	ENSANAG00000029353	PTCD2	99	73.643	Aotus_nancymaae
ENSFCAG00000045432	PTCD2	74	47.785	ENSACLG00000027742	ptcd2	81	47.785	Astatotilapia_calliptera
ENSFCAG00000045432	PTCD2	66	44.170	ENSAMXG00000029404	ptcd2	75	44.170	Astyanax_mexicanus
ENSFCAG00000045432	PTCD2	82	75.521	ENSBTAG00000014675	PTCD2	100	75.521	Bos_taurus
ENSFCAG00000045432	PTCD2	83	72.868	ENSCJAG00000016364	PTCD2	99	72.868	Callithrix_jacchus
ENSFCAG00000045432	PTCD2	88	74.755	ENSCAFG00000007982	PTCD2	97	74.092	Canis_familiaris
ENSFCAG00000045432	PTCD2	74	86.032	ENSCAFG00020019147	PTCD2	88	86.032	Canis_lupus_dingo
ENSFCAG00000045432	PTCD2	82	75.521	ENSCHIG00000017118	PTCD2	100	75.521	Capra_hircus
ENSFCAG00000045432	PTCD2	82	66.057	ENSCPOG00000040168	PTCD2	100	66.057	Cavia_porcellus
ENSFCAG00000045432	PTCD2	83	72.351	ENSCCAG00000029389	-	99	72.351	Cebus_capucinus
ENSFCAG00000045432	PTCD2	66	66.667	ENSCCAG00000021996	-	98	65.204	Cebus_capucinus
ENSFCAG00000045432	PTCD2	82	71.540	ENSCATG00000019069	PTCD2	100	71.540	Cercocebus_atys
ENSFCAG00000045432	PTCD2	82	66.580	ENSCLAG00000000072	PTCD2	100	66.580	Chinchilla_lanigera
ENSFCAG00000045432	PTCD2	82	73.368	ENSCSAG00000015623	PTCD2	100	73.368	Chlorocebus_sabaeus
ENSFCAG00000045432	PTCD2	71	58.958	ENSCHOG00000010634	PTCD2	88	58.958	Choloepus_hoffmanni
ENSFCAG00000045432	PTCD2	84	53.077	ENSCPBG00000000216	PTCD2	99	53.077	Chrysemys_picta_bellii
ENSFCAG00000045432	PTCD2	83	72.093	ENSCANG00000035636	PTCD2	99	72.093	Colobus_angolensis_palliatus
ENSFCAG00000045432	PTCD2	100	58.952	ENSCGRG00001015289	Ptcd2	100	58.952	Cricetulus_griseus_chok1gshd
ENSFCAG00000045432	PTCD2	100	58.952	ENSCGRG00000006193	Ptcd2	100	58.952	Cricetulus_griseus_crigri
ENSFCAG00000045432	PTCD2	74	46.349	ENSCVAG00000001285	ptcd2	81	46.349	Cyprinodon_variegatus
ENSFCAG00000045432	PTCD2	72	46.129	ENSDARG00000035391	ptcd2	81	46.129	Danio_rerio
ENSFCAG00000045432	PTCD2	82	72.324	ENSDNOG00000008719	PTCD2	100	72.324	Dasypus_novemcinctus
ENSFCAG00000045432	PTCD2	82	69.509	ENSDORG00000004921	Ptcd2	100	69.509	Dipodomys_ordii
ENSFCAG00000045432	PTCD2	84	63.496	ENSETEG00000016542	PTCD2	100	63.496	Echinops_telfairi
ENSFCAG00000045432	PTCD2	82	74.278	ENSEASG00005018038	PTCD2	99	74.278	Equus_asinus_asinus
ENSFCAG00000045432	PTCD2	83	74.479	ENSECAG00000007022	PTCD2	99	74.479	Equus_caballus
ENSFCAG00000045432	PTCD2	83	69.010	ENSEEUG00000014031	PTCD2	99	69.010	Erinaceus_europaeus
ENSFCAG00000045432	PTCD2	73	49.363	ENSELUG00000003584	ptcd2	82	49.363	Esox_lucius
ENSFCAG00000045432	PTCD2	73	54.633	ENSFALG00000010299	PTCD2	95	54.633	Ficedula_albicollis
ENSFCAG00000045432	PTCD2	78	69.337	ENSFDAG00000018461	PTCD2	95	69.337	Fukomys_damarensis
ENSFCAG00000045432	PTCD2	74	50.000	ENSGMOG00000003637	ptcd2	82	50.000	Gadus_morhua
ENSFCAG00000045432	PTCD2	73	53.674	ENSGALG00000038260	PTCD2	82	53.674	Gallus_gallus
ENSFCAG00000045432	PTCD2	84	54.359	ENSGAGG00000021952	PTCD2	99	54.359	Gopherus_agassizii
ENSFCAG00000045432	PTCD2	83	73.902	ENSGGOG00000010695	PTCD2	99	73.902	Gorilla_gorilla
ENSFCAG00000045432	PTCD2	74	47.785	ENSHBUG00000009191	ptcd2	81	47.785	Haplochromis_burtoni
ENSFCAG00000045432	PTCD2	82	68.407	ENSHGLG00000001234	PTCD2	100	68.407	Heterocephalus_glaber_female
ENSFCAG00000045432	PTCD2	82	68.407	ENSHGLG00100015419	PTCD2	100	68.407	Heterocephalus_glaber_male
ENSFCAG00000045432	PTCD2	72	48.534	ENSHCOG00000001703	ptcd2	79	48.534	Hippocampus_comes
ENSFCAG00000045432	PTCD2	61	46.183	ENSIPUG00000006080	ptcd2	79	45.246	Ictalurus_punctatus
ENSFCAG00000045432	PTCD2	82	73.560	ENSSTOG00000006596	PTCD2	99	73.560	Ictidomys_tridecemlineatus
ENSFCAG00000045432	PTCD2	82	70.496	ENSJJAG00000024388	Ptcd2	100	70.496	Jaculus_jaculus
ENSFCAG00000045432	PTCD2	74	43.175	ENSKMAG00000009329	ptcd2	82	43.175	Kryptolebias_marmoratus
ENSFCAG00000045432	PTCD2	74	48.101	ENSLBEG00000024871	ptcd2	81	48.101	Labrus_bergylta
ENSFCAG00000045432	PTCD2	73	55.732	ENSLOCG00000011122	ptcd2	82	55.732	Lepisosteus_oculatus
ENSFCAG00000045432	PTCD2	66	72.669	ENSLAFG00000004115	PTCD2	100	72.669	Loxodonta_africana
ENSFCAG00000045432	PTCD2	83	71.318	ENSMFAG00000031516	PTCD2	99	71.318	Macaca_fascicularis
ENSFCAG00000045432	PTCD2	82	71.540	ENSMNEG00000007537	PTCD2	100	71.540	Macaca_nemestrina
ENSFCAG00000045432	PTCD2	83	71.318	ENSMLEG00000031093	PTCD2	99	71.318	Mandrillus_leucophaeus
ENSFCAG00000045432	PTCD2	74	48.571	ENSMAMG00000018529	ptcd2	82	48.571	Mastacembelus_armatus
ENSFCAG00000045432	PTCD2	74	47.785	ENSMZEG00005003625	ptcd2	81	47.785	Maylandia_zebra
ENSFCAG00000045432	PTCD2	73	53.994	ENSMGAG00000005033	PTCD2	90	53.994	Meleagris_gallopavo
ENSFCAG00000045432	PTCD2	78	52.329	ENSMAUG00000020253	Ptcd2	95	52.329	Mesocricetus_auratus
ENSFCAG00000045432	PTCD2	83	73.698	ENSMICG00000004535	PTCD2	99	73.698	Microcebus_murinus
ENSFCAG00000045432	PTCD2	78	69.315	ENSMOCG00000019985	Ptcd2	96	69.315	Microtus_ochrogaster
ENSFCAG00000045432	PTCD2	73	59.744	ENSMODG00000001695	PTCD2	82	59.744	Monodelphis_domestica
ENSFCAG00000045432	PTCD2	74	47.619	ENSMALG00000022372	ptcd2	82	47.619	Monopterus_albus
ENSFCAG00000045432	PTCD2	78	67.397	MGP_CAROLIEiJ_G0018829	Ptcd2	96	67.397	Mus_caroli
ENSFCAG00000045432	PTCD2	78	66.849	ENSMUSG00000021650	Ptcd2	96	66.849	Mus_musculus
ENSFCAG00000045432	PTCD2	78	69.863	MGP_PahariEiJ_G0015904	Ptcd2	96	69.863	Mus_pahari
ENSFCAG00000045432	PTCD2	78	67.397	MGP_SPRETEiJ_G0019711	Ptcd2	96	67.397	Mus_spretus
ENSFCAG00000045432	PTCD2	82	81.201	ENSMPUG00000014401	PTCD2	100	81.201	Mustela_putorius_furo
ENSFCAG00000045432	PTCD2	84	73.196	ENSMLUG00000007374	PTCD2	100	73.196	Myotis_lucifugus
ENSFCAG00000045432	PTCD2	82	67.363	ENSNGAG00000005027	Ptcd2	100	67.363	Nannospalax_galili
ENSFCAG00000045432	PTCD2	74	47.152	ENSNBRG00000000092	-	95	47.152	Neolamprologus_brichardi
ENSFCAG00000045432	PTCD2	74	48.101	ENSNBRG00000008174	ptcd2	82	48.101	Neolamprologus_brichardi
ENSFCAG00000045432	PTCD2	83	73.127	ENSNLEG00000004516	PTCD2	99	73.127	Nomascus_leucogenys
ENSFCAG00000045432	PTCD2	70	52.333	ENSMEUG00000014012	-	82	51.438	Notamacropus_eugenii
ENSFCAG00000045432	PTCD2	83	67.442	ENSOPRG00000007290	PTCD2	99	67.442	Ochotona_princeps
ENSFCAG00000045432	PTCD2	82	68.146	ENSODEG00000016417	PTCD2	100	68.146	Octodon_degus
ENSFCAG00000045432	PTCD2	60	49.219	ENSONIG00000011269	ptcd2	75	49.219	Oreochromis_niloticus
ENSFCAG00000045432	PTCD2	78	71.233	ENSOCUG00000007970	PTCD2	100	69.713	Oryctolagus_cuniculus
ENSFCAG00000045432	PTCD2	74	46.032	ENSORLG00000003851	ptcd2	81	46.032	Oryzias_latipes
ENSFCAG00000045432	PTCD2	74	45.397	ENSORLG00020009823	ptcd2	82	45.397	Oryzias_latipes_hni
ENSFCAG00000045432	PTCD2	72	46.753	ENSORLG00015016777	ptcd2	89	46.753	Oryzias_latipes_hsok
ENSFCAG00000045432	PTCD2	74	45.079	ENSOMEG00000012396	ptcd2	76	45.079	Oryzias_melastigma
ENSFCAG00000045432	PTCD2	83	67.442	ENSOGAG00000008390	PTCD2	99	67.442	Otolemur_garnettii
ENSFCAG00000045432	PTCD2	84	75.321	ENSOARG00000005087	PTCD2	100	75.321	Ovis_aries
ENSFCAG00000045432	PTCD2	83	73.902	ENSPPAG00000028480	PTCD2	99	73.902	Pan_paniscus
ENSFCAG00000045432	PTCD2	83	73.385	ENSPTRG00000016968	PTCD2	99	73.385	Pan_troglodytes
ENSFCAG00000045432	PTCD2	74	79.618	ENSPANG00000006611	PTCD2	81	79.618	Papio_anubis
ENSFCAG00000045432	PTCD2	73	49.682	ENSPKIG00000019896	ptcd2	82	49.682	Paramormyrops_kingsleyae
ENSFCAG00000045432	PTCD2	63	62.593	ENSPSIG00000014559	PTCD2	84	62.593	Pelodiscus_sinensis
ENSFCAG00000045432	PTCD2	78	68.937	ENSPEMG00000000884	Ptcd2	96	68.937	Peromyscus_maniculatus_bairdii
ENSFCAG00000045432	PTCD2	82	54.688	ENSPCIG00000029047	PTCD2	100	54.688	Phascolarctos_cinereus
ENSFCAG00000045432	PTCD2	68	46.897	ENSPLAG00000010456	ptcd2	82	44.762	Poecilia_latipinna
ENSFCAG00000045432	PTCD2	74	45.079	ENSPREG00000021797	ptcd2	80	45.079	Poecilia_reticulata
ENSFCAG00000045432	PTCD2	83	72.269	ENSPPYG00000015543	PTCD2	99	72.269	Pongo_abelii
ENSFCAG00000045432	PTCD2	66	60.366	ENSPCAG00000006806	PTCD2	100	60.366	Procavia_capensis
ENSFCAG00000045432	PTCD2	84	73.385	ENSPVAG00000010935	PTCD2	100	73.385	Pteropus_vampyrus
ENSFCAG00000045432	PTCD2	74	47.785	ENSPNYG00000003122	ptcd2	81	47.785	Pundamilia_nyererei
ENSFCAG00000045432	PTCD2	73	49.684	ENSPNAG00000021490	ptcd2	82	50.000	Pygocentrus_nattereri
ENSFCAG00000045432	PTCD2	82	69.191	ENSRNOG00000028403	Ptcd2	100	69.191	Rattus_norvegicus
ENSFCAG00000045432	PTCD2	83	68.475	ENSRBIG00000032929	PTCD2	99	68.475	Rhinopithecus_bieti
ENSFCAG00000045432	PTCD2	82	73.890	ENSRROG00000000080	PTCD2	100	73.890	Rhinopithecus_roxellana
ENSFCAG00000045432	PTCD2	82	71.279	ENSSBOG00000018911	PTCD2	100	71.279	Saimiri_boliviensis_boliviensis
ENSFCAG00000045432	PTCD2	82	54.688	ENSSHAG00000003833	PTCD2	99	54.688	Sarcophilus_harrisii
ENSFCAG00000045432	PTCD2	67	49.650	ENSSFOG00015015415	ptcd2	75	49.650	Scleropages_formosus
ENSFCAG00000045432	PTCD2	74	44.479	ENSSMAG00000010350	ptcd2	83	43.653	Scophthalmus_maximus
ENSFCAG00000045432	PTCD2	72	49.191	ENSSDUG00000008142	ptcd2	77	49.191	Seriola_dumerili
ENSFCAG00000045432	PTCD2	72	49.515	ENSSLDG00000015284	ptcd2	81	49.515	Seriola_lalandi_dorsalis
ENSFCAG00000045432	PTCD2	66	61.981	ENSSARG00000004983	PTCD2	100	61.981	Sorex_araneus
ENSFCAG00000045432	PTCD2	73	57.188	ENSSPUG00000000176	PTCD2	79	57.188	Sphenodon_punctatus
ENSFCAG00000045432	PTCD2	73	45.367	ENSSPAG00000008591	ptcd2	80	45.367	Stegastes_partitus
ENSFCAG00000045432	PTCD2	86	81.471	ENSSSCG00000016975	PTCD2	96	79.265	Sus_scrofa
ENSFCAG00000045432	PTCD2	73	52.885	ENSTGUG00000005705	PTCD2	89	52.885	Taeniopygia_guttata
ENSFCAG00000045432	PTCD2	83	69.509	ENSTBEG00000016559	PTCD2	99	69.509	Tupaia_belangeri
ENSFCAG00000045432	PTCD2	83	75.515	ENSTTRG00000011851	PTCD2	99	75.515	Tursiops_truncatus
ENSFCAG00000045432	PTCD2	89	79.126	ENSUAMG00000007583	PTCD2	96	79.126	Ursus_americanus
ENSFCAG00000045432	PTCD2	82	79.634	ENSUMAG00000007666	PTCD2	100	79.634	Ursus_maritimus
ENSFCAG00000045432	PTCD2	84	73.522	ENSVPAG00000009597	PTCD2	100	73.522	Vicugna_pacos
ENSFCAG00000045432	PTCD2	82	76.240	ENSVVUG00000007299	-	100	76.240	Vulpes_vulpes
ENSFCAG00000045432	PTCD2	73	53.822	ENSXETG00000031652	PTCD2	82	53.822	Xenopus_tropicalis
ENSFCAG00000045432	PTCD2	69	45.578	ENSXMAG00000005940	ptcd2	75	44.762	Xiphophorus_maculatus