EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000000126 (Gene tree)
Gene ID: 104850256
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1854 bases
Position: chrKN124076.1:497205-499058
Accession: 104850256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013491	RRM_5	PF13893.6	4.8e-12	1	2
ENSFDAP00000013491	RRM_5	PF13893.6	4.8e-12	2	2
ENSFDAP00000013491	RRM_1	PF00076.22	1.4e-76	1	4
ENSFDAP00000013491	RRM_1	PF00076.22	1.4e-76	2	4
ENSFDAP00000013491	RRM_1	PF00076.22	1.4e-76	3	4
ENSFDAP00000013491	RRM_1	PF00076.22	1.4e-76	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000026392	PABPC5-201	1483	XM_010607092	ENSFDAP00000013491	382 (aa)	XP_010605394	A0A091DHV7

Gene Model

Click here to download ENSFDAG00000000126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000000126	PABPC5	94	34.568	ENSFDAG00000018820	ELAVL2	86	34.568
ENSFDAG00000000126	PABPC5	95	58.953	ENSFDAG00000008291	PABPC1L	63	59.270
ENSFDAG00000000126	PABPC5	95	66.667	ENSFDAG00000020016	-	56	66.854
ENSFDAG00000000126	PABPC5	94	64.918	ENSFDAG00000005583	PABPC1	55	64.918
ENSFDAG00000000126	PABPC5	96	59.615	ENSFDAG00000019606	PABPC4L	98	59.551
ENSFDAG00000000126	PABPC5	96	61.983	ENSFDAG00000018480	PABPC3	60	62.079
ENSFDAG00000000126	PABPC5	93	58.673	ENSFDAG00000005484	-	98	58.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000126	PABPC5	99	96.325	ENSG00000174740	PABPC5	99	96.325	Homo_sapiens
ENSFDAG00000000126	PABPC5	99	96.325	ENSAMEG00000020114	PABPC5	100	96.325	Ailuropoda_melanoleuca
ENSFDAG00000000126	PABPC5	99	96.325	ENSANAG00000005063	PABPC5	99	96.325	Aotus_nancymaae
ENSFDAG00000000126	PABPC5	100	95.550	ENSBTAG00000019942	PABPC5	100	95.550	Bos_taurus
ENSFDAG00000000126	PABPC5	99	96.063	ENSCJAG00000003665	PABPC5	99	96.063	Callithrix_jacchus
ENSFDAG00000000126	PABPC5	100	95.812	ENSCAFG00000017452	PABPC5	100	95.812	Canis_familiaris
ENSFDAG00000000126	PABPC5	100	95.550	ENSCHIG00000019004	PABPC5	100	95.550	Capra_hircus
ENSFDAG00000000126	PABPC5	100	95.812	ENSTSYG00000036351	PABPC5	100	95.812	Carlito_syrichta
ENSFDAG00000000126	PABPC5	99	89.529	ENSCAPG00000010714	PABPC5	100	89.529	Cavia_aperea
ENSFDAG00000000126	PABPC5	100	94.764	ENSCPOG00000002555	PABPC5	100	94.764	Cavia_porcellus
ENSFDAG00000000126	PABPC5	99	96.325	ENSCCAG00000032154	PABPC5	99	96.325	Cebus_capucinus
ENSFDAG00000000126	PABPC5	99	96.325	ENSCATG00000043083	PABPC5	99	96.325	Cercocebus_atys
ENSFDAG00000000126	PABPC5	100	96.335	ENSCLAG00000000647	PABPC5	100	96.335	Chinchilla_lanigera
ENSFDAG00000000126	PABPC5	99	96.325	ENSCSAG00000000065	PABPC5	99	96.325	Chlorocebus_sabaeus
ENSFDAG00000000126	PABPC5	99	96.325	ENSCANG00000011473	PABPC5	99	96.325	Colobus_angolensis_palliatus
ENSFDAG00000000126	PABPC5	100	92.932	ENSCGRG00000018699	Pabpc5	100	92.932	Cricetulus_griseus_crigri
ENSFDAG00000000126	PABPC5	100	77.023	ENSETEG00000011832	PABPC5	100	77.023	Echinops_telfairi
ENSFDAG00000000126	PABPC5	100	96.597	ENSEASG00005014396	PABPC5	100	96.597	Equus_asinus_asinus
ENSFDAG00000000126	PABPC5	100	96.597	ENSECAG00000003452	PABPC5	100	96.597	Equus_caballus
ENSFDAG00000000126	PABPC5	100	96.073	ENSFCAG00000004998	PABPC5	100	96.073	Felis_catus
ENSFDAG00000000126	PABPC5	99	96.325	ENSGGOG00000007622	PABPC5	99	96.325	Gorilla_gorilla
ENSFDAG00000000126	PABPC5	95	95.413	ENSJJAG00000011960	Pabpc5	100	95.413	Jaculus_jaculus
ENSFDAG00000000126	PABPC5	99	96.325	ENSMFAG00000024561	PABPC5	99	96.325	Macaca_fascicularis
ENSFDAG00000000126	PABPC5	99	96.325	ENSMMUG00000011562	PABPC5	99	96.325	Macaca_mulatta
ENSFDAG00000000126	PABPC5	99	96.325	ENSMNEG00000037604	PABPC5	99	96.325	Macaca_nemestrina
ENSFDAG00000000126	PABPC5	99	96.325	ENSMLEG00000028318	PABPC5	99	96.325	Mandrillus_leucophaeus
ENSFDAG00000000126	PABPC5	100	95.026	ENSMICG00000041706	PABPC5	100	95.026	Microcebus_murinus
ENSFDAG00000000126	PABPC5	100	94.241	ENSMOCG00000001554	Pabpc5	100	94.241	Microtus_ochrogaster
ENSFDAG00000000126	PABPC5	99	92.368	MGP_CAROLIEiJ_G0033367	Pabpc5	99	92.368	Mus_caroli
ENSFDAG00000000126	PABPC5	99	92.895	ENSMUSG00000034732	Pabpc5	99	92.895	Mus_musculus
ENSFDAG00000000126	PABPC5	100	93.194	MGP_PahariEiJ_G0031908	Pabpc5	100	93.194	Mus_pahari
ENSFDAG00000000126	PABPC5	99	92.895	MGP_SPRETEiJ_G0034533	Pabpc5	99	92.895	Mus_spretus
ENSFDAG00000000126	PABPC5	100	95.288	ENSMPUG00000018465	PABPC5	100	95.288	Mustela_putorius_furo
ENSFDAG00000000126	PABPC5	100	94.764	ENSMLUG00000008244	PABPC5	100	94.764	Myotis_lucifugus
ENSFDAG00000000126	PABPC5	95	94.495	ENSNGAG00000004371	Pabpc5	100	94.495	Nannospalax_galili
ENSFDAG00000000126	PABPC5	99	96.325	ENSNLEG00000035086	PABPC5	99	96.325	Nomascus_leucogenys
ENSFDAG00000000126	PABPC5	98	97.738	ENSOPRG00000000856	PABPC5	100	97.738	Ochotona_princeps
ENSFDAG00000000126	PABPC5	100	96.597	ENSOCUG00000010919	PABPC5	100	96.597	Oryctolagus_cuniculus
ENSFDAG00000000126	PABPC5	100	95.288	ENSOGAG00000006882	PABPC5	100	95.288	Otolemur_garnettii
ENSFDAG00000000126	PABPC5	100	95.812	ENSOARG00000010260	PABPC5	100	95.812	Ovis_aries
ENSFDAG00000000126	PABPC5	99	96.063	ENSPPAG00000007378	PABPC5	99	96.063	Pan_paniscus
ENSFDAG00000000126	PABPC5	100	96.073	ENSPPRG00000010742	PABPC5	100	96.073	Panthera_pardus
ENSFDAG00000000126	PABPC5	100	96.073	ENSPTIG00000001480	PABPC5	100	96.073	Panthera_tigris_altaica
ENSFDAG00000000126	PABPC5	99	96.325	ENSPTRG00000022078	PABPC5	99	96.325	Pan_troglodytes
ENSFDAG00000000126	PABPC5	99	96.325	ENSPANG00000018282	PABPC5	99	96.325	Papio_anubis
ENSFDAG00000000126	PABPC5	100	93.455	ENSPEMG00000000171	Pabpc5	100	93.455	Peromyscus_maniculatus_bairdii
ENSFDAG00000000126	PABPC5	99	96.325	ENSPPYG00000020526	PABPC5	99	96.325	Pongo_abelii
ENSFDAG00000000126	PABPC5	99	96.364	ENSPCAG00000015577	PABPC5	100	96.364	Procavia_capensis
ENSFDAG00000000126	PABPC5	100	95.812	ENSPCOG00000000676	PABPC5	100	95.812	Propithecus_coquereli
ENSFDAG00000000126	PABPC5	100	96.073	ENSPVAG00000006465	PABPC5	100	96.073	Pteropus_vampyrus
ENSFDAG00000000126	PABPC5	100	93.194	ENSRNOG00000003354	Pabpc5	100	93.194	Rattus_norvegicus
ENSFDAG00000000126	PABPC5	99	96.325	ENSRBIG00000011760	PABPC5	99	96.325	Rhinopithecus_bieti
ENSFDAG00000000126	PABPC5	99	96.325	ENSRROG00000036708	PABPC5	99	96.325	Rhinopithecus_roxellana
ENSFDAG00000000126	PABPC5	99	96.325	ENSSBOG00000008658	PABPC5	99	96.325	Saimiri_boliviensis_boliviensis
ENSFDAG00000000126	PABPC5	100	93.194	ENSSARG00000014012	PABPC5	100	93.194	Sorex_araneus
ENSFDAG00000000126	PABPC5	100	95.812	ENSSSCG00000040194	PABPC5	100	95.812	Sus_scrofa
ENSFDAG00000000126	PABPC5	100	97.382	ENSTBEG00000016482	PABPC5	100	97.382	Tupaia_belangeri
ENSFDAG00000000126	PABPC5	100	95.812	ENSUAMG00000013627	PABPC5	100	95.812	Ursus_americanus
ENSFDAG00000000126	PABPC5	100	96.073	ENSUMAG00000023934	PABPC5	100	96.073	Ursus_maritimus
ENSFDAG00000000126	PABPC5	100	95.812	ENSVPAG00000001063	PABPC5	100	95.812	Vicugna_pacos
ENSFDAG00000000126	PABPC5	100	96.073	ENSVVUG00000013172	PABPC5	100	96.073	Vulpes_vulpes