EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000000265 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 862 bases
Position: chrKN124048.1:13472183-13473044
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013565	Ribonuc_P_40	PF08584.11	6.6e-57	1	1
ENSFDAP00000013559	Ribonuc_P_40	PF08584.11	7.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000001432	-	846	-	ENSFDAP00000013565	282 (aa)	-	-
ENSFDAT00000026484	-	786	-	ENSFDAP00000013559	262 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000000265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000000265	-	100	75.254	ENSFDAG00000013001	-	81	75.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000265	-	99	70.790	ENSG00000124787	RPP40	96	70.790	Homo_sapiens
ENSFDAG00000000265	-	99	70.890	ENSAMEG00000012938	RPP40	80	70.890	Ailuropoda_melanoleuca
ENSFDAG00000000265	-	99	30.822	ENSACIG00000003617	rpp40	79	30.822	Amphilophus_citrinellus
ENSFDAG00000000265	-	99	31.379	ENSAOCG00000011846	rpp40	80	31.379	Amphiprion_ocellaris
ENSFDAG00000000265	-	99	31.379	ENSAPEG00000001322	rpp40	80	31.379	Amphiprion_percula
ENSFDAG00000000265	-	99	30.986	ENSATEG00000006584	rpp40	80	30.986	Anabas_testudineus
ENSFDAG00000000265	-	99	53.425	ENSAPLG00000005691	RPP40	96	53.425	Anas_platyrhynchos
ENSFDAG00000000265	-	99	52.740	ENSACAG00000006550	RPP40	72	52.740	Anolis_carolinensis
ENSFDAG00000000265	-	99	69.416	ENSANAG00000029246	RPP40	82	69.416	Aotus_nancymaae
ENSFDAG00000000265	-	98	33.333	ENSACLG00000015883	rpp40	78	33.333	Astatotilapia_calliptera
ENSFDAG00000000265	-	99	39.726	ENSAMXG00000001755	rpp40	80	39.726	Astyanax_mexicanus
ENSFDAG00000000265	-	99	68.836	ENSBTAG00000003332	RPP40	80	68.836	Bos_taurus
ENSFDAG00000000265	-	99	69.759	ENSCJAG00000021373	RPP40	80	69.759	Callithrix_jacchus
ENSFDAG00000000265	-	99	69.521	ENSCAFG00000009435	RPP40	80	69.521	Canis_familiaris
ENSFDAG00000000265	-	99	69.521	ENSCAFG00020013380	RPP40	80	69.521	Canis_lupus_dingo
ENSFDAG00000000265	-	99	67.808	ENSCHIG00000016849	RPP40	96	67.808	Capra_hircus
ENSFDAG00000000265	-	99	71.575	ENSTSYG00000032857	RPP40	96	71.575	Carlito_syrichta
ENSFDAG00000000265	-	100	66.102	ENSCAPG00000004957	RPP40	88	66.102	Cavia_aperea
ENSFDAG00000000265	-	100	72.203	ENSCPOG00000005855	RPP40	81	72.203	Cavia_porcellus
ENSFDAG00000000265	-	99	70.447	ENSCCAG00000019809	RPP40	80	70.447	Cebus_capucinus
ENSFDAG00000000265	-	99	70.447	ENSCATG00000038787	RPP40	80	70.447	Cercocebus_atys
ENSFDAG00000000265	-	100	73.220	ENSCLAG00000003235	RPP40	81	73.220	Chinchilla_lanigera
ENSFDAG00000000265	-	99	70.790	ENSCSAG00000007307	RPP40	80	70.790	Chlorocebus_sabaeus
ENSFDAG00000000265	-	66	73.973	ENSCHOG00000005856	-	72	73.973	Choloepus_hoffmanni
ENSFDAG00000000265	-	100	58.983	ENSCPBG00000009003	RPP40	81	58.983	Chrysemys_picta_bellii
ENSFDAG00000000265	-	99	70.790	ENSCANG00000033965	RPP40	80	70.790	Colobus_angolensis_palliatus
ENSFDAG00000000265	-	99	64.726	ENSCGRG00001018328	Rpp40	80	64.726	Cricetulus_griseus_chok1gshd
ENSFDAG00000000265	-	99	64.726	ENSCGRG00000011344	Rpp40	80	64.726	Cricetulus_griseus_crigri
ENSFDAG00000000265	-	100	31.058	ENSCSEG00000015006	-	81	31.058	Cynoglossus_semilaevis
ENSFDAG00000000265	-	99	40.068	ENSDARG00000017605	rpp40	81	40.068	Danio_rerio
ENSFDAG00000000265	-	79	68.559	ENSDNOG00000048136	RPP40	77	68.559	Dasypus_novemcinctus
ENSFDAG00000000265	-	94	53.358	ENSDORG00000011196	-	80	53.282	Dipodomys_ordii
ENSFDAG00000000265	-	100	67.458	ENSDORG00000029944	-	81	67.458	Dipodomys_ordii
ENSFDAG00000000265	-	100	51.186	ENSETEG00000007458	RPP40	81	51.186	Echinops_telfairi
ENSFDAG00000000265	-	99	35.052	ENSEBUG00000000386	rpp40	90	35.052	Eptatretus_burgeri
ENSFDAG00000000265	-	100	69.492	ENSEASG00005012116	RPP40	65	69.492	Equus_asinus_asinus
ENSFDAG00000000265	-	100	70.508	ENSECAG00000017247	RPP40	65	70.508	Equus_caballus
ENSFDAG00000000265	-	71	66.667	ENSEEUG00000012087	RPP40	70	66.667	Erinaceus_europaeus
ENSFDAG00000000265	-	99	40.753	ENSELUG00000017004	rpp40	81	40.753	Esox_lucius
ENSFDAG00000000265	-	99	71.233	ENSFCAG00000009249	RPP40	80	71.233	Felis_catus
ENSFDAG00000000265	-	99	53.595	ENSFALG00000013166	RPP40	94	53.595	Ficedula_albicollis
ENSFDAG00000000265	-	99	33.448	ENSFHEG00000021429	rpp40	71	33.448	Fundulus_heteroclitus
ENSFDAG00000000265	-	99	32.753	ENSGMOG00000018653	rpp40	88	32.753	Gadus_morhua
ENSFDAG00000000265	-	100	52.203	ENSGALG00000036074	RPP40	81	52.203	Gallus_gallus
ENSFDAG00000000265	-	99	32.639	ENSGACG00000002472	rpp40	80	32.639	Gasterosteus_aculeatus
ENSFDAG00000000265	-	100	59.322	ENSGAGG00000012918	RPP40	81	59.322	Gopherus_agassizii
ENSFDAG00000000265	-	99	70.790	ENSGGOG00000013764	RPP40	80	70.790	Gorilla_gorilla
ENSFDAG00000000265	-	99	33.451	ENSHBUG00000009378	rpp40	82	33.451	Haplochromis_burtoni
ENSFDAG00000000265	-	99	75.000	ENSHGLG00000004871	RPP40	80	75.000	Heterocephalus_glaber_female
ENSFDAG00000000265	-	99	75.342	ENSHGLG00100002080	RPP40	80	75.342	Heterocephalus_glaber_male
ENSFDAG00000000265	-	99	39.519	ENSIPUG00000008951	RPP40	80	39.519	Ictalurus_punctatus
ENSFDAG00000000265	-	100	70.847	ENSSTOG00000011199	RPP40	81	70.847	Ictidomys_tridecemlineatus
ENSFDAG00000000265	-	100	66.102	ENSJJAG00000020629	Rpp40	81	66.102	Jaculus_jaculus
ENSFDAG00000000265	-	98	30.556	ENSKMAG00000019358	rpp40	79	30.556	Kryptolebias_marmoratus
ENSFDAG00000000265	-	99	33.564	ENSLBEG00000022724	rpp40	80	33.564	Labrus_bergylta
ENSFDAG00000000265	-	99	48.110	ENSLACG00000014848	RPP40	81	48.110	Latimeria_chalumnae
ENSFDAG00000000265	-	99	45.361	ENSLOCG00000011650	rpp40	80	45.361	Lepisosteus_oculatus
ENSFDAG00000000265	-	99	68.151	ENSLAFG00000007530	RPP40	96	68.151	Loxodonta_africana
ENSFDAG00000000265	-	99	70.103	ENSMFAG00000043100	RPP40	80	70.103	Macaca_fascicularis
ENSFDAG00000000265	-	99	69.759	ENSMMUG00000004966	RPP40	80	69.759	Macaca_mulatta
ENSFDAG00000000265	-	99	70.790	ENSMNEG00000041986	RPP40	96	70.790	Macaca_nemestrina
ENSFDAG00000000265	-	99	61.168	ENSMLEG00000040851	RPP40	76	85.366	Mandrillus_leucophaeus
ENSFDAG00000000265	-	99	31.724	ENSMAMG00000019551	rpp40	79	31.724	Mastacembelus_armatus
ENSFDAG00000000265	-	99	33.448	ENSMZEG00005019475	rpp40	80	33.448	Maylandia_zebra
ENSFDAG00000000265	-	100	53.220	ENSMGAG00000004009	RPP40	82	53.220	Meleagris_gallopavo
ENSFDAG00000000265	-	99	66.781	ENSMAUG00000010268	Rpp40	80	66.781	Mesocricetus_auratus
ENSFDAG00000000265	-	99	69.178	ENSMICG00000003297	RPP40	79	66.176	Microcebus_murinus
ENSFDAG00000000265	-	100	65.763	ENSMOCG00000000305	Rpp40	81	65.763	Microtus_ochrogaster
ENSFDAG00000000265	-	93	30.522	ENSMMOG00000020591	-	79	31.660	Mola_mola
ENSFDAG00000000265	-	99	63.481	ENSMODG00000009826	RPP40	80	63.481	Monodelphis_domestica
ENSFDAG00000000265	-	99	32.639	ENSMALG00000020133	rpp40	91	32.639	Monopterus_albus
ENSFDAG00000000265	-	99	67.123	MGP_CAROLIEiJ_G0018429	Rpp40	80	67.123	Mus_caroli
ENSFDAG00000000265	-	99	68.493	ENSMUSG00000021418	Rpp40	80	68.493	Mus_musculus
ENSFDAG00000000265	-	99	67.123	MGP_PahariEiJ_G0019497	Rpp40	80	67.123	Mus_pahari
ENSFDAG00000000265	-	99	67.808	MGP_SPRETEiJ_G0019309	Rpp40	80	67.808	Mus_spretus
ENSFDAG00000000265	-	99	69.521	ENSMPUG00000000530	RPP40	75	69.521	Mustela_putorius_furo
ENSFDAG00000000265	-	100	68.814	ENSMLUG00000000501	RPP40	81	68.814	Myotis_lucifugus
ENSFDAG00000000265	-	100	67.797	ENSNGAG00000023955	-	81	67.797	Nannospalax_galili
ENSFDAG00000000265	-	88	65.021	ENSNGAG00000022529	-	81	65.891	Nannospalax_galili
ENSFDAG00000000265	-	98	31.022	ENSNBRG00000017465	rpp40	77	31.022	Neolamprologus_brichardi
ENSFDAG00000000265	-	99	69.759	ENSNLEG00000034397	RPP40	80	69.759	Nomascus_leucogenys
ENSFDAG00000000265	-	99	56.849	ENSMEUG00000005300	RPP40	80	56.849	Notamacropus_eugenii
ENSFDAG00000000265	-	100	72.542	ENSODEG00000007255	-	81	72.542	Octodon_degus
ENSFDAG00000000265	-	100	68.727	ENSODEG00000006170	-	91	68.727	Octodon_degus
ENSFDAG00000000265	-	100	67.458	ENSODEG00000018153	-	81	67.458	Octodon_degus
ENSFDAG00000000265	-	99	33.448	ENSONIG00000014016	rpp40	79	33.448	Oreochromis_niloticus
ENSFDAG00000000265	-	99	59.386	ENSOANG00000001200	RPP40	96	59.386	Ornithorhynchus_anatinus
ENSFDAG00000000265	-	99	64.041	ENSOCUG00000000354	RPP40	80	64.041	Oryctolagus_cuniculus
ENSFDAG00000000265	-	99	32.056	ENSORLG00000008242	-	80	32.056	Oryzias_latipes
ENSFDAG00000000265	-	99	32.069	ENSORLG00020013745	-	73	32.069	Oryzias_latipes_hni
ENSFDAG00000000265	-	99	32.404	ENSORLG00015000887	-	80	32.404	Oryzias_latipes_hsok
ENSFDAG00000000265	-	99	33.448	ENSOMEG00000002747	rpp40	80	33.448	Oryzias_melastigma
ENSFDAG00000000265	-	99	69.521	ENSOGAG00000006055	RPP40	80	69.521	Otolemur_garnettii
ENSFDAG00000000265	-	99	67.466	ENSOARG00000018783	RPP40	96	67.466	Ovis_aries
ENSFDAG00000000265	-	99	70.103	ENSPPAG00000023703	RPP40	80	70.103	Pan_paniscus
ENSFDAG00000000265	-	99	71.233	ENSPPRG00000005612	RPP40	80	71.233	Panthera_pardus
ENSFDAG00000000265	-	99	66.551	ENSPTIG00000018847	RPP40	80	66.551	Panthera_tigris_altaica
ENSFDAG00000000265	-	99	70.103	ENSPTRG00000017690	RPP40	80	70.103	Pan_troglodytes
ENSFDAG00000000265	-	99	71.134	ENSPANG00000017865	RPP40	80	71.134	Papio_anubis
ENSFDAG00000000265	-	99	40.411	ENSPKIG00000006311	rpp40	81	40.411	Paramormyrops_kingsleyae
ENSFDAG00000000265	-	79	54.338	ENSPSIG00000007854	RPP40	100	54.054	Pelodiscus_sinensis
ENSFDAG00000000265	-	98	64.815	ENSPEMG00000020809	Rpp40	84	63.103	Peromyscus_maniculatus_bairdii
ENSFDAG00000000265	-	93	36.187	ENSPMAG00000008412	rpp40	97	37.687	Petromyzon_marinus
ENSFDAG00000000265	-	99	64.384	ENSPCIG00000010682	RPP40	80	64.384	Phascolarctos_cinereus
ENSFDAG00000000265	-	98	30.000	ENSPFOG00000011460	rpp40	79	30.000	Poecilia_formosa
ENSFDAG00000000265	-	98	30.556	ENSPREG00000009215	rpp40	79	30.556	Poecilia_reticulata
ENSFDAG00000000265	-	99	70.790	ENSPPYG00000016194	RPP40	80	70.790	Pongo_abelii
ENSFDAG00000000265	-	99	69.863	ENSPCOG00000003907	RPP40	80	69.863	Propithecus_coquereli
ENSFDAG00000000265	-	99	70.890	ENSPVAG00000011325	RPP40	80	70.890	Pteropus_vampyrus
ENSFDAG00000000265	-	99	33.451	ENSPNYG00000004432	rpp40	96	33.451	Pundamilia_nyererei
ENSFDAG00000000265	-	99	39.384	ENSPNAG00000019125	rpp40	81	39.384	Pygocentrus_nattereri
ENSFDAG00000000265	-	99	68.493	ENSRNOG00000016226	Rpp40	96	68.493	Rattus_norvegicus
ENSFDAG00000000265	-	99	71.821	ENSRBIG00000035800	RPP40	96	71.134	Rhinopithecus_bieti
ENSFDAG00000000265	-	99	71.821	ENSRROG00000039116	RPP40	80	71.134	Rhinopithecus_roxellana
ENSFDAG00000000265	-	99	69.416	ENSSBOG00000020297	RPP40	80	69.416	Saimiri_boliviensis_boliviensis
ENSFDAG00000000265	-	93	61.818	ENSSHAG00000002102	RPP40	99	61.818	Sarcophilus_harrisii
ENSFDAG00000000265	-	99	41.781	ENSSFOG00015001142	rpp40	65	41.781	Scleropages_formosus
ENSFDAG00000000265	-	99	30.450	ENSSDUG00000007202	rpp40	80	30.450	Seriola_dumerili
ENSFDAG00000000265	-	99	30.104	ENSSLDG00000017563	rpp40	80	30.104	Seriola_lalandi_dorsalis
ENSFDAG00000000265	-	99	55.517	ENSSPUG00000018950	-	99	55.517	Sphenodon_punctatus
ENSFDAG00000000265	-	99	56.357	ENSSPUG00000017487	-	80	56.357	Sphenodon_punctatus
ENSFDAG00000000265	-	99	32.759	ENSSPAG00000022716	rpp40	80	32.759	Stegastes_partitus
ENSFDAG00000000265	-	100	64.068	ENSSSCG00000000998	RPP40	97	64.068	Sus_scrofa
ENSFDAG00000000265	-	100	55.254	ENSTGUG00000002258	-	82	55.254	Taeniopygia_guttata
ENSFDAG00000000265	-	63	51.977	ENSTGUG00000015246	-	100	53.107	Taeniopygia_guttata
ENSFDAG00000000265	-	99	35.069	ENSTRUG00000003755	rpp40	80	35.069	Takifugu_rubripes
ENSFDAG00000000265	-	99	32.639	ENSTNIG00000003077	rpp40	80	32.639	Tetraodon_nigroviridis
ENSFDAG00000000265	-	89	43.320	ENSTBEG00000014467	-	72	43.320	Tupaia_belangeri
ENSFDAG00000000265	-	99	60.959	ENSTTRG00000007319	RPP40	81	60.959	Tursiops_truncatus
ENSFDAG00000000265	-	100	69.153	ENSUAMG00000002159	RPP40	97	69.153	Ursus_americanus
ENSFDAG00000000265	-	100	69.153	ENSUMAG00000018639	RPP40	76	69.153	Ursus_maritimus
ENSFDAG00000000265	-	79	56.332	ENSVPAG00000004652	-	80	56.332	Vicugna_pacos
ENSFDAG00000000265	-	100	68.814	ENSVVUG00000005451	RPP40	81	68.814	Vulpes_vulpes
ENSFDAG00000000265	-	98	45.017	ENSXETG00000017617	rpp40	80	45.017	Xenopus_tropicalis