EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000000331 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 1295 bases
Position: chrKN120925.1:3297938-3299232
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013603	RRM_1	PF00076.22	5.5e-23	1	2
ENSFDAP00000013603	RRM_1	PF00076.22	5.5e-23	2	2
ENSFDAP00000013606	RRM_1	PF00076.22	5.8e-23	1	2
ENSFDAP00000013606	RRM_1	PF00076.22	5.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000001589	-	1125	-	ENSFDAP00000013603	374 (aa)	-	-
ENSFDAT00000001585	-	1146	-	ENSFDAP00000013606	381 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000000331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000000331	-	53	61.616	ENSFDAG00000018739	-	100	60.548
ENSFDAG00000000331	-	79	58.416	ENSFDAG00000021342	-	88	59.394
ENSFDAG00000000331	-	83	56.151	ENSFDAG00000014067	-	83	55.319
ENSFDAG00000000331	-	77	63.014	ENSFDAG00000009547	-	78	47.022
ENSFDAG00000000331	-	66	53.817	ENSFDAG00000000793	HNRNPA2B1	89	50.000
ENSFDAG00000000331	-	52	84.211	ENSFDAG00000006685	HNRNPA3	92	79.817
ENSFDAG00000000331	-	51	72.449	ENSFDAG00000010106	-	77	70.800
ENSFDAG00000000331	-	53	60.000	ENSFDAG00000018460	-	89	57.798
ENSFDAG00000000331	-	60	48.148	ENSFDAG00000019780	HNRNPA0	81	50.515
ENSFDAG00000000331	-	53	78.523	ENSFDAG00000020873	-	77	77.340
ENSFDAG00000000331	-	76	30.928	ENSFDAG00000000851	-	68	34.896

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000331	-	50	65.625	ENSAPOG00000003641	hnrnpa3	73	67.760	Acanthochromis_polyacanthus
ENSFDAG00000000331	-	62	36.162	ENSAPOG00000003364	HNRNPA0	61	45.455	Acanthochromis_polyacanthus
ENSFDAG00000000331	-	50	65.625	ENSAPOG00000014678	-	91	54.603	Acanthochromis_polyacanthus
ENSFDAG00000000331	-	52	66.169	ENSAPOG00000003688	hnrnpa3	84	58.805	Acanthochromis_polyacanthus
ENSFDAG00000000331	-	57	48.131	ENSAPOG00000003387	HNRNPA0	66	50.262	Acanthochromis_polyacanthus
ENSFDAG00000000331	-	61	46.288	ENSAMEG00000016316	HNRNPA0	64	51.777	Ailuropoda_melanoleuca
ENSFDAG00000000331	-	50	50.562	ENSACIG00000021834	HNRNPA0	86	48.969	Amphilophus_citrinellus
ENSFDAG00000000331	-	52	66.169	ENSAOCG00000004095	hnrnpa3	83	58.805	Amphiprion_ocellaris
ENSFDAG00000000331	-	52	66.169	ENSAPEG00000022522	hnrnpa3	83	58.805	Amphiprion_percula
ENSFDAG00000000331	-	50	46.629	ENSATEG00000003526	-	94	46.629	Anabas_testudineus
ENSFDAG00000000331	-	52	66.169	ENSATEG00000015304	hnrnpa3	91	58.805	Anabas_testudineus
ENSFDAG00000000331	-	53	76.617	ENSACAG00000012234	-	85	66.769	Anolis_carolinensis
ENSFDAG00000000331	-	52	77.612	ENSANAG00000037918	-	92	74.006	Aotus_nancymaae
ENSFDAG00000000331	-	67	40.000	ENSACLG00000008973	HNRNPA0	61	43.750	Astatotilapia_calliptera
ENSFDAG00000000331	-	51	67.347	ENSACLG00000008532	hnrnpa3	90	60.064	Astatotilapia_calliptera
ENSFDAG00000000331	-	52	77.114	ENSCJAG00000013830	-	91	75.076	Callithrix_jacchus
ENSFDAG00000000331	-	60	45.370	ENSCHIG00000002602	HNRNPA0	65	52.792	Capra_hircus
ENSFDAG00000000331	-	52	70.500	ENSCAPG00000003643	-	90	70.642	Cavia_aperea
ENSFDAG00000000331	-	50	67.010	ENSCATG00000038569	-	92	67.081	Cercocebus_atys
ENSFDAG00000000331	-	59	48.585	ENSCLAG00000015132	HNRNPA0	65	52.151	Chinchilla_lanigera
ENSFDAG00000000331	-	57	58.222	ENSCSAG00000011517	-	89	56.119	Chlorocebus_sabaeus
ENSFDAG00000000331	-	52	43.515	ENSCPBG00000008738	HNRNPA0	64	52.020	Chrysemys_picta_bellii
ENSFDAG00000000331	-	85	41.325	ENSCING00000013663	-	52	55.155	Ciona_intestinalis
ENSFDAG00000000331	-	52	78.607	ENSCANG00000017881	-	89	75.380	Colobus_angolensis_palliatus
ENSFDAG00000000331	-	56	47.549	ENSCGRG00001005548	Hnrnpa0	63	52.083	Cricetulus_griseus_chok1gshd
ENSFDAG00000000331	-	56	66.820	ENSCGRG00001010070	-	93	52.905	Cricetulus_griseus_chok1gshd
ENSFDAG00000000331	-	56	66.820	ENSCGRG00000007592	-	91	52.905	Cricetulus_griseus_crigri
ENSFDAG00000000331	-	51	66.162	ENSCVAG00000018995	hnrnpa3	88	57.994	Cyprinodon_variegatus
ENSFDAG00000000331	-	58	64.317	ENSDARG00000059351	hnrnpa3	83	68.500	Danio_rerio
ENSFDAG00000000331	-	52	79.208	ENSDNOG00000031964	-	90	60.000	Dasypus_novemcinctus
ENSFDAG00000000331	-	50	61.635	ENSEBUG00000009297	HNRNPA0	89	53.497	Eptatretus_burgeri
ENSFDAG00000000331	-	55	55.924	ENSEBUG00000016570	HNRNPA0	58	57.071	Eptatretus_burgeri
ENSFDAG00000000331	-	66	55.133	ENSELUG00000023080	hnrnpa3	85	59.643	Esox_lucius
ENSFDAG00000000331	-	54	45.726	ENSGALG00000006160	HNRNPA0	64	53.030	Gallus_gallus
ENSFDAG00000000331	-	53	64.179	ENSGACG00000004477	hnrnpa3	90	56.442	Gasterosteus_aculeatus
ENSFDAG00000000331	-	52	43.333	ENSGAGG00000005632	HNRNPA0	64	52.020	Gopherus_agassizii
ENSFDAG00000000331	-	50	50.562	ENSHBUG00000023868	HNRNPA0	74	49.738	Haplochromis_burtoni
ENSFDAG00000000331	-	51	67.347	ENSHBUG00000019734	hnrnpa3	90	60.383	Haplochromis_burtoni
ENSFDAG00000000331	-	53	72.277	ENSHGLG00000014577	-	87	64.706	Heterocephalus_glaber_female
ENSFDAG00000000331	-	53	79.902	ENSHGLG00100006677	-	87	68.421	Heterocephalus_glaber_male
ENSFDAG00000000331	-	82	71.207	ENSHGLG00100001336	-	92	73.089	Heterocephalus_glaber_male
ENSFDAG00000000331	-	60	45.872	ENSJJAG00000006954	Hnrnpa0	67	51.795	Jaculus_jaculus
ENSFDAG00000000331	-	52	65.174	ENSKMAG00000015973	hnrnpa3	91	58.824	Kryptolebias_marmoratus
ENSFDAG00000000331	-	52	67.164	ENSLBEG00000016767	hnrnpa3	92	57.862	Labrus_bergylta
ENSFDAG00000000331	-	56	68.182	ENSLACG00000008189	hnrnpa3	92	60.182	Latimeria_chalumnae
ENSFDAG00000000331	-	51	71.579	ENSLOCG00000006986	hnrnpa3	92	65.231	Lepisosteus_oculatus
ENSFDAG00000000331	-	65	59.073	ENSLAFG00000027712	-	60	75.000	Loxodonta_africana
ENSFDAG00000000331	-	50	65.816	ENSMMUG00000031232	-	92	66.361	Macaca_mulatta
ENSFDAG00000000331	-	92	64.840	ENSMNEG00000038943	-	79	66.829	Macaca_nemestrina
ENSFDAG00000000331	-	90	66.474	ENSMLEG00000033415	-	92	64.615	Mandrillus_leucophaeus
ENSFDAG00000000331	-	65	45.339	ENSMAMG00000017754	HNRNPA0	70	51.685	Mastacembelus_armatus
ENSFDAG00000000331	-	51	67.347	ENSMZEG00005004663	hnrnpa3	90	60.064	Maylandia_zebra
ENSFDAG00000000331	-	67	40.000	ENSMZEG00005001055	HNRNPA0	61	43.750	Maylandia_zebra
ENSFDAG00000000331	-	56	45.588	ENSMAUG00000018485	Hnrnpa0	63	52.632	Mesocricetus_auratus
ENSFDAG00000000331	-	52	74.500	ENSMODG00000024570	-	91	68.098	Monodelphis_domestica
ENSFDAG00000000331	-	55	65.728	ENSMALG00000009691	hnrnpa3	88	57.994	Monopterus_albus
ENSFDAG00000000331	-	52	76.000	ENSNLEG00000027151	-	92	70.279	Nomascus_leucogenys
ENSFDAG00000000331	-	82	63.987	ENSODEG00000016578	-	85	61.755	Octodon_degus
ENSFDAG00000000331	-	51	67.347	ENSONIG00000008607	hnrnpa3	75	60.383	Oreochromis_niloticus
ENSFDAG00000000331	-	52	67.164	ENSORLG00000017561	hnrnpa3	91	59.748	Oryzias_latipes
ENSFDAG00000000331	-	64	33.798	ENSORLG00020008203	-	60	41.573	Oryzias_latipes_hni
ENSFDAG00000000331	-	55	64.286	ENSORLG00020020788	hnrnpa3	91	59.748	Oryzias_latipes_hni
ENSFDAG00000000331	-	70	36.131	ENSORLG00020022487	-	62	43.503	Oryzias_latipes_hni
ENSFDAG00000000331	-	52	67.164	ENSORLG00015014774	hnrnpa3	91	59.748	Oryzias_latipes_hsok
ENSFDAG00000000331	-	85	33.333	ENSORLG00015016236	HNRNPA0	57	37.989	Oryzias_latipes_hsok
ENSFDAG00000000331	-	70	37.226	ENSORLG00015016169	HNRNPA0	60	41.341	Oryzias_latipes_hsok
ENSFDAG00000000331	-	82	38.339	ENSORLG00015017144	-	58	43.750	Oryzias_latipes_hsok
ENSFDAG00000000331	-	52	67.164	ENSOMEG00000004838	hnrnpa3	92	58.491	Oryzias_melastigma
ENSFDAG00000000331	-	65	44.492	ENSOGAG00000025754	HNRNPA0	81	51.295	Otolemur_garnettii
ENSFDAG00000000331	-	51	43.836	ENSOARG00000015434	HNRNPA0	66	52.792	Ovis_aries
ENSFDAG00000000331	-	78	40.656	ENSPKIG00000020281	-	55	53.723	Paramormyrops_kingsleyae
ENSFDAG00000000331	-	52	69.652	ENSPKIG00000022916	hnrnpa3	72	69.652	Paramormyrops_kingsleyae
ENSFDAG00000000331	-	60	54.167	ENSPMGG00000000747	hnrnpa3	78	61.677	Periophthalmus_magnuspinnatus
ENSFDAG00000000331	-	69	45.783	ENSPEMG00000020274	Hnrnpa0	96	46.899	Peromyscus_maniculatus_bairdii
ENSFDAG00000000331	-	52	65.174	ENSPFOG00000014049	hnrnpa3	92	56.289	Poecilia_formosa
ENSFDAG00000000331	-	55	45.641	ENSPLAG00000015223	-	59	47.802	Poecilia_latipinna
ENSFDAG00000000331	-	52	65.174	ENSPMEG00000006390	hnrnpa3	92	56.289	Poecilia_mexicana
ENSFDAG00000000331	-	52	65.174	ENSPREG00000005411	hnrnpa3	92	56.604	Poecilia_reticulata
ENSFDAG00000000331	-	82	62.727	ENSPPYG00000012967	-	86	68.396	Pongo_abelii
ENSFDAG00000000331	-	59	59.483	ENSPNYG00000008424	hnrnpa3	74	69.714	Pundamilia_nyererei
ENSFDAG00000000331	-	83	64.968	ENSRROG00000034643	-	90	63.836	Rhinopithecus_roxellana
ENSFDAG00000000331	-	52	69.652	ENSSFOG00015001814	hnrnpa3	88	61.111	Scleropages_formosus
ENSFDAG00000000331	-	56	60.455	ENSSMAG00000015218	hnrnpa3	86	56.928	Scophthalmus_maximus
ENSFDAG00000000331	-	85	53.049	ENSSDUG00000000381	hnrnpa3	90	58.730	Seriola_dumerili
ENSFDAG00000000331	-	62	46.222	ENSSPUG00000016613	HNRNPA0	64	51.777	Sphenodon_punctatus
ENSFDAG00000000331	-	52	65.672	ENSSPAG00000008969	hnrnpa3	90	59.105	Stegastes_partitus
ENSFDAG00000000331	-	51	53.333	ENSSSCG00000033635	-	52	54.301	Sus_scrofa
ENSFDAG00000000331	-	54	59.716	ENSSSCG00000001098	-	91	60.843	Sus_scrofa
ENSFDAG00000000331	-	51	53.333	ENSSSCG00000040926	-	53	54.211	Sus_scrofa
ENSFDAG00000000331	-	52	65.174	ENSTRUG00000017504	hnrnpa3	90	58.044	Takifugu_rubripes
ENSFDAG00000000331	-	68	35.125	ENSTRUG00000021494	-	60	41.341	Takifugu_rubripes
ENSFDAG00000000331	-	52	65.000	ENSTNIG00000016958	hnrnpa3	90	58.879	Tetraodon_nigroviridis
ENSFDAG00000000331	-	52	74.257	ENSXETG00000001806	hnrnpa3	88	65.569	Xenopus_tropicalis
ENSFDAG00000000331	-	52	65.672	ENSXMAG00000000439	hnrnpa3	92	56.289	Xiphophorus_maculatus
ENSFDAG00000000331	-	55	45.588	ENSXMAG00000029150	HNRNPA0	63	47.644	Xiphophorus_maculatus