EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000000598 (Gene tree)
Gene ID: 104850131
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 6675 bases
Position: chrKN124048.1:12892359-12899033
Accession: 104850131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013732	RRM_1	PF00076.22	1.2e-14	1	1
ENSFDAP00000013732	RRM_3	PF08777.11	3.5e-31	1	1
ENSFDAP00000013732	La	PF05383.17	5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000001938	SSB-201	1228	XM_010606958	ENSFDAP00000013732	405 (aa)	XP_010605260	UPI00053F2C3D

Gene Model

Click here to download ENSFDAG00000000598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000598	SSB	100	94.608	ENSG00000138385	SSB	100	98.333	Homo_sapiens
ENSFDAG00000000598	SSB	98	55.224	ENSAPOG00000003448	ssb	100	55.665	Acanthochromis_polyacanthus
ENSFDAG00000000598	SSB	100	91.190	ENSAMEG00000010507	SSB	100	91.190	Ailuropoda_melanoleuca
ENSFDAG00000000598	SSB	92	58.824	ENSACIG00000001738	ssb	97	58.667	Amphilophus_citrinellus
ENSFDAG00000000598	SSB	98	55.473	ENSAOCG00000020398	ssb	100	56.158	Amphiprion_ocellaris
ENSFDAG00000000598	SSB	98	55.721	ENSAPEG00000020395	ssb	100	56.404	Amphiprion_percula
ENSFDAG00000000598	SSB	99	58.867	ENSATEG00000016884	ssb	100	59.360	Anabas_testudineus
ENSFDAG00000000598	SSB	100	70.755	ENSAPLG00000006109	SSB	100	72.235	Anas_platyrhynchos
ENSFDAG00000000598	SSB	100	68.293	ENSACAG00000017008	SSB	99	68.293	Anolis_carolinensis
ENSFDAG00000000598	SSB	100	85.185	ENSANAG00000027195	-	100	85.185	Aotus_nancymaae
ENSFDAG00000000598	SSB	99	55.198	ENSACLG00000010798	ssb	100	54.950	Astatotilapia_calliptera
ENSFDAG00000000598	SSB	98	55.392	ENSAMXG00000012606	ssb	100	56.659	Astyanax_mexicanus
ENSFDAG00000000598	SSB	100	94.568	ENSBTAG00000008716	SSB	100	94.568	Bos_taurus
ENSFDAG00000000598	SSB	73	35.430	WBGene00016653	C44E4.4	85	33.333	Caenorhabditis_elegans
ENSFDAG00000000598	SSB	100	94.321	ENSCJAG00000045073	SSB	100	94.321	Callithrix_jacchus
ENSFDAG00000000598	SSB	100	95.074	ENSCAFG00000012418	SSB	100	95.074	Canis_familiaris
ENSFDAG00000000598	SSB	100	95.074	ENSCAFG00020002900	SSB	100	95.074	Canis_lupus_dingo
ENSFDAG00000000598	SSB	100	94.568	ENSCHIG00000022624	-	100	94.568	Capra_hircus
ENSFDAG00000000598	SSB	100	88.395	ENSCHIG00000022196	-	100	88.395	Capra_hircus
ENSFDAG00000000598	SSB	100	95.556	ENSTSYG00000000097	SSB	100	95.556	Carlito_syrichta
ENSFDAG00000000598	SSB	100	98.272	ENSCPOG00000003338	SSB	100	98.272	Cavia_porcellus
ENSFDAG00000000598	SSB	100	95.062	ENSCCAG00000035147	SSB	100	95.062	Cebus_capucinus
ENSFDAG00000000598	SSB	100	74.815	ENSCATG00000036701	SSB	100	74.815	Cercocebus_atys
ENSFDAG00000000598	SSB	100	70.370	ENSCATG00000042909	-	100	70.370	Cercocebus_atys
ENSFDAG00000000598	SSB	100	97.778	ENSCLAG00000015617	-	100	97.778	Chinchilla_lanigera
ENSFDAG00000000598	SSB	98	86.146	ENSCSAG00000018390	-	100	86.146	Chlorocebus_sabaeus
ENSFDAG00000000598	SSB	100	95.309	ENSCSAG00000015200	SSB	89	95.309	Chlorocebus_sabaeus
ENSFDAG00000000598	SSB	100	95.309	ENSCHOG00000007763	SSB	100	95.309	Choloepus_hoffmanni
ENSFDAG00000000598	SSB	100	78.973	ENSCPBG00000006519	SSB	100	79.951	Chrysemys_picta_bellii
ENSFDAG00000000598	SSB	100	80.494	ENSCANG00000033240	-	100	80.494	Colobus_angolensis_palliatus
ENSFDAG00000000598	SSB	98	73.935	ENSCANG00000028838	-	95	73.935	Colobus_angolensis_palliatus
ENSFDAG00000000598	SSB	100	95.309	ENSCANG00000027695	SSB	100	95.309	Colobus_angolensis_palliatus
ENSFDAG00000000598	SSB	100	78.537	ENSCGRG00001024831	Ssb	100	79.756	Cricetulus_griseus_chok1gshd
ENSFDAG00000000598	SSB	100	78.537	ENSCGRG00000005387	Ssb	100	79.756	Cricetulus_griseus_crigri
ENSFDAG00000000598	SSB	98	57.250	ENSCSEG00000011599	ssb	99	58.000	Cynoglossus_semilaevis
ENSFDAG00000000598	SSB	99	57.985	ENSCVAG00000021558	ssb	100	58.477	Cyprinodon_variegatus
ENSFDAG00000000598	SSB	98	57.568	ENSDARG00000029252	ssb	99	57.568	Danio_rerio
ENSFDAG00000000598	SSB	100	95.556	ENSDNOG00000013450	SSB	100	95.556	Dasypus_novemcinctus
ENSFDAG00000000598	SSB	100	84.672	ENSDORG00000005543	Ssb	100	84.672	Dipodomys_ordii
ENSFDAG00000000598	SSB	84	34.384	FBgn0011638	La	86	34.831	Drosophila_melanogaster
ENSFDAG00000000598	SSB	58	94.030	ENSETEG00000004614	-	61	94.030	Echinops_telfairi
ENSFDAG00000000598	SSB	96	48.082	ENSEBUG00000001237	ssb	96	48.338	Eptatretus_burgeri
ENSFDAG00000000598	SSB	100	95.802	ENSEASG00005022835	SSB	100	95.802	Equus_asinus_asinus
ENSFDAG00000000598	SSB	100	96.049	ENSECAG00000018495	SSB	100	96.049	Equus_caballus
ENSFDAG00000000598	SSB	82	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSFDAG00000000598	SSB	98	59.453	ENSELUG00000020929	ssb	100	59.951	Esox_lucius
ENSFDAG00000000598	SSB	100	94.335	ENSFCAG00000011601	SSB	100	94.335	Felis_catus
ENSFDAG00000000598	SSB	100	74.265	ENSFALG00000000930	SSB	100	75.430	Ficedula_albicollis
ENSFDAG00000000598	SSB	72	55.184	ENSFHEG00000003268	ssb	95	55.229	Fundulus_heteroclitus
ENSFDAG00000000598	SSB	97	55.087	ENSGMOG00000002664	ssb	99	55.831	Gadus_morhua
ENSFDAG00000000598	SSB	100	75.490	ENSGALG00000009677	SSB	100	75.490	Gallus_gallus
ENSFDAG00000000598	SSB	99	56.158	ENSGAFG00000002749	ssb	100	56.404	Gambusia_affinis
ENSFDAG00000000598	SSB	99	54.612	ENSGACG00000005107	ssb	100	54.964	Gasterosteus_aculeatus
ENSFDAG00000000598	SSB	100	78.729	ENSGAGG00000007807	SSB	100	79.707	Gopherus_agassizii
ENSFDAG00000000598	SSB	100	77.778	ENSGGOG00000024891	-	100	77.778	Gorilla_gorilla
ENSFDAG00000000598	SSB	63	91.556	ENSGGOG00000023471	-	100	91.556	Gorilla_gorilla
ENSFDAG00000000598	SSB	99	54.703	ENSHBUG00000006584	ssb	100	54.455	Haplochromis_burtoni
ENSFDAG00000000598	SSB	100	97.087	ENSHGLG00000017580	-	100	97.087	Heterocephalus_glaber_female
ENSFDAG00000000598	SSB	100	90.172	ENSHGLG00000004478	-	100	90.172	Heterocephalus_glaber_female
ENSFDAG00000000598	SSB	100	89.136	ENSHGLG00000005832	-	100	89.136	Heterocephalus_glaber_female
ENSFDAG00000000598	SSB	100	84.444	ENSHGLG00100008767	-	100	84.444	Heterocephalus_glaber_male
ENSFDAG00000000598	SSB	100	97.087	ENSHGLG00100003084	-	100	97.087	Heterocephalus_glaber_male
ENSFDAG00000000598	SSB	98	55.668	ENSHCOG00000019011	ssb	99	55.919	Hippocampus_comes
ENSFDAG00000000598	SSB	97	58.955	ENSIPUG00000003681	SSB	99	59.406	Ictalurus_punctatus
ENSFDAG00000000598	SSB	100	95.802	ENSSTOG00000008416	SSB	100	95.802	Ictidomys_tridecemlineatus
ENSFDAG00000000598	SSB	100	80.615	ENSJJAG00000023158	-	100	80.615	Jaculus_jaculus
ENSFDAG00000000598	SSB	99	68.408	ENSJJAG00000016250	-	99	68.408	Jaculus_jaculus
ENSFDAG00000000598	SSB	99	56.650	ENSKMAG00000017317	ssb	100	57.143	Kryptolebias_marmoratus
ENSFDAG00000000598	SSB	98	54.229	ENSLBEG00000017345	ssb	100	55.172	Labrus_bergylta
ENSFDAG00000000598	SSB	99	66.830	ENSLACG00000014056	SSB	99	69.118	Latimeria_chalumnae
ENSFDAG00000000598	SSB	98	67.332	ENSLOCG00000007933	ssb	99	67.830	Lepisosteus_oculatus
ENSFDAG00000000598	SSB	75	70.199	ENSLAFG00000026721	-	99	70.199	Loxodonta_africana
ENSFDAG00000000598	SSB	100	79.753	ENSLAFG00000028909	-	100	79.753	Loxodonta_africana
ENSFDAG00000000598	SSB	100	86.730	ENSLAFG00000000867	-	100	89.573	Loxodonta_africana
ENSFDAG00000000598	SSB	88	81.232	ENSMFAG00000041478	-	100	81.232	Macaca_fascicularis
ENSFDAG00000000598	SSB	100	95.556	ENSMFAG00000039066	SSB	100	95.556	Macaca_fascicularis
ENSFDAG00000000598	SSB	100	95.556	ENSMMUG00000023051	SSB	100	95.556	Macaca_mulatta
ENSFDAG00000000598	SSB	100	80.000	ENSMMUG00000011724	-	97	80.000	Macaca_mulatta
ENSFDAG00000000598	SSB	99	66.253	ENSMMUG00000039889	-	100	66.501	Macaca_mulatta
ENSFDAG00000000598	SSB	88	81.232	ENSMNEG00000034698	-	100	81.232	Macaca_nemestrina
ENSFDAG00000000598	SSB	100	83.415	ENSMNEG00000028321	SSB	100	83.415	Macaca_nemestrina
ENSFDAG00000000598	SSB	100	95.556	ENSMLEG00000035717	SSB	100	95.556	Mandrillus_leucophaeus
ENSFDAG00000000598	SSB	100	67.407	ENSMLEG00000042644	-	100	67.407	Mandrillus_leucophaeus
ENSFDAG00000000598	SSB	99	59.606	ENSMAMG00000004800	ssb	100	60.099	Mastacembelus_armatus
ENSFDAG00000000598	SSB	99	55.198	ENSMZEG00005005749	ssb	100	54.950	Maylandia_zebra
ENSFDAG00000000598	SSB	100	75.245	ENSMGAG00000010328	SSB	99	77.073	Meleagris_gallopavo
ENSFDAG00000000598	SSB	99	96.278	ENSMICG00000028252	-	99	96.278	Microcebus_murinus
ENSFDAG00000000598	SSB	98	87.406	ENSMICG00000033304	-	95	90.054	Microcebus_murinus
ENSFDAG00000000598	SSB	85	79.874	ENSMODG00000007027	-	99	79.874	Monodelphis_domestica
ENSFDAG00000000598	SSB	100	78.795	ENSMODG00000008227	-	100	79.518	Monodelphis_domestica
ENSFDAG00000000598	SSB	100	67.407	ENSMODG00000019271	-	100	52.555	Monodelphis_domestica
ENSFDAG00000000598	SSB	90	56.369	ENSMALG00000008045	ssb	90	59.682	Monopterus_albus
ENSFDAG00000000598	SSB	100	77.672	MGP_CAROLIEiJ_G0023629	-	100	91.304	Mus_caroli
ENSFDAG00000000598	SSB	100	76.960	ENSMUSG00000068882	Ssb	100	91.304	Mus_musculus
ENSFDAG00000000598	SSB	100	77.435	MGP_PahariEiJ_G0025081	-	100	92.391	Mus_pahari
ENSFDAG00000000598	SSB	100	76.960	MGP_SPRETEiJ_G0024551	Ssb	100	91.304	Mus_spretus
ENSFDAG00000000598	SSB	100	95.309	ENSMPUG00000000785	SSB	100	95.309	Mustela_putorius_furo
ENSFDAG00000000598	SSB	100	90.000	ENSMLUG00000016316	SSB	100	90.000	Myotis_lucifugus
ENSFDAG00000000598	SSB	99	54.950	ENSNBRG00000012661	ssb	100	54.703	Neolamprologus_brichardi
ENSFDAG00000000598	SSB	100	95.309	ENSNLEG00000004958	SSB	100	95.309	Nomascus_leucogenys
ENSFDAG00000000598	SSB	100	67.980	ENSNLEG00000028754	-	100	68.473	Nomascus_leucogenys
ENSFDAG00000000598	SSB	61	89.113	ENSMEUG00000001650	-	100	89.113	Notamacropus_eugenii
ENSFDAG00000000598	SSB	72	75.517	ENSOPRG00000008475	-	100	75.517	Ochotona_princeps
ENSFDAG00000000598	SSB	93	90.741	ENSODEG00000004202	-	100	90.741	Octodon_degus
ENSFDAG00000000598	SSB	99	54.950	ENSONIG00000008776	ssb	100	54.703	Oreochromis_niloticus
ENSFDAG00000000598	SSB	100	84.444	ENSOANG00000008543	SSB	100	84.444	Ornithorhynchus_anatinus
ENSFDAG00000000598	SSB	100	95.802	ENSOCUG00000010396	SSB	100	95.802	Oryctolagus_cuniculus
ENSFDAG00000000598	SSB	99	57.882	ENSORLG00000017208	ssb	100	58.128	Oryzias_latipes
ENSFDAG00000000598	SSB	99	58.128	ENSORLG00020022574	ssb	100	58.374	Oryzias_latipes_hni
ENSFDAG00000000598	SSB	99	57.635	ENSORLG00015016592	ssb	100	57.882	Oryzias_latipes_hsok
ENSFDAG00000000598	SSB	98	57.855	ENSOMEG00000003193	ssb	100	58.765	Oryzias_melastigma
ENSFDAG00000000598	SSB	100	90.047	ENSOGAG00000029768	SSB	100	90.047	Otolemur_garnettii
ENSFDAG00000000598	SSB	100	94.074	ENSOARG00000002906	SSB	100	94.074	Ovis_aries
ENSFDAG00000000598	SSB	100	94.608	ENSPPAG00000042673	SSB	100	94.608	Pan_paniscus
ENSFDAG00000000598	SSB	100	76.790	ENSPPAG00000032427	-	100	86.047	Pan_paniscus
ENSFDAG00000000598	SSB	97	73.604	ENSPPAG00000006189	-	96	77.419	Pan_paniscus
ENSFDAG00000000598	SSB	100	94.335	ENSPPRG00000006599	SSB	100	94.335	Panthera_pardus
ENSFDAG00000000598	SSB	100	94.335	ENSPTIG00000011021	SSB	97	94.335	Panthera_tigris_altaica
ENSFDAG00000000598	SSB	100	73.333	ENSPTRG00000042880	-	100	73.333	Pan_troglodytes
ENSFDAG00000000598	SSB	100	94.608	ENSPTRG00000012620	SSB	100	94.608	Pan_troglodytes
ENSFDAG00000000598	SSB	100	67.901	ENSPANG00000034126	-	100	68.395	Papio_anubis
ENSFDAG00000000598	SSB	100	95.556	ENSPANG00000007440	SSB	100	95.556	Papio_anubis
ENSFDAG00000000598	SSB	98	65.664	ENSPANG00000031877	-	95	65.664	Papio_anubis
ENSFDAG00000000598	SSB	99	62.963	ENSPKIG00000019325	ssb	99	63.704	Paramormyrops_kingsleyae
ENSFDAG00000000598	SSB	100	76.039	ENSPSIG00000002265	SSB	93	77.017	Pelodiscus_sinensis
ENSFDAG00000000598	SSB	84	55.908	ENSPMGG00000020075	ssb	91	56.196	Periophthalmus_magnuspinnatus
ENSFDAG00000000598	SSB	99	44.988	ENSPMAG00000002982	ssb	100	46.279	Petromyzon_marinus
ENSFDAG00000000598	SSB	100	83.990	ENSPCIG00000028591	-	100	84.236	Phascolarctos_cinereus
ENSFDAG00000000598	SSB	99	57.143	ENSPFOG00000009650	ssb	100	57.389	Poecilia_formosa
ENSFDAG00000000598	SSB	99	56.897	ENSPLAG00000020498	ssb	100	57.143	Poecilia_latipinna
ENSFDAG00000000598	SSB	99	56.650	ENSPMEG00000001051	ssb	100	57.143	Poecilia_mexicana
ENSFDAG00000000598	SSB	94	57.292	ENSPREG00000003708	ssb	99	57.552	Poecilia_reticulata
ENSFDAG00000000598	SSB	100	95.309	ENSPPYG00000012919	SSB	100	95.309	Pongo_abelii
ENSFDAG00000000598	SSB	95	90.339	ENSPCAG00000010276	SSB	100	90.339	Procavia_capensis
ENSFDAG00000000598	SSB	100	84.691	ENSPCOG00000023189	-	100	84.691	Propithecus_coquereli
ENSFDAG00000000598	SSB	100	92.346	ENSPCOG00000015741	-	100	92.346	Propithecus_coquereli
ENSFDAG00000000598	SSB	87	95.480	ENSPVAG00000006615	SSB	100	95.480	Pteropus_vampyrus
ENSFDAG00000000598	SSB	99	55.198	ENSPNYG00000006444	ssb	100	54.950	Pundamilia_nyererei
ENSFDAG00000000598	SSB	98	57.143	ENSPNAG00000011708	ssb	100	58.252	Pygocentrus_nattereri
ENSFDAG00000000598	SSB	100	77.672	ENSRNOG00000007998	Ssb	100	77.672	Rattus_norvegicus
ENSFDAG00000000598	SSB	100	78.186	ENSRNOG00000011606	AABR07061825.1	100	78.186	Rattus_norvegicus
ENSFDAG00000000598	SSB	100	68.719	ENSRBIG00000029918	-	100	68.719	Rhinopithecus_bieti
ENSFDAG00000000598	SSB	94	78.892	ENSRBIG00000041232	-	98	78.892	Rhinopithecus_bieti
ENSFDAG00000000598	SSB	100	79.024	ENSRBIG00000041972	SSB	88	98.261	Rhinopithecus_bieti
ENSFDAG00000000598	SSB	89	87.293	ENSRBIG00000041608	-	98	87.293	Rhinopithecus_bieti
ENSFDAG00000000598	SSB	100	78.325	ENSRROG00000007149	-	100	78.325	Rhinopithecus_roxellana
ENSFDAG00000000598	SSB	100	95.309	ENSRROG00000040346	SSB	100	95.309	Rhinopithecus_roxellana
ENSFDAG00000000598	SSB	98	79.798	ENSRROG00000031684	-	100	79.798	Rhinopithecus_roxellana
ENSFDAG00000000598	SSB	98	85.750	ENSRROG00000034102	-	98	85.678	Rhinopithecus_roxellana
ENSFDAG00000000598	SSB	100	95.309	ENSSBOG00000027204	SSB	100	95.309	Saimiri_boliviensis_boliviensis
ENSFDAG00000000598	SSB	100	83.251	ENSSHAG00000018062	SSB	100	83.498	Sarcophilus_harrisii
ENSFDAG00000000598	SSB	99	65.037	ENSSFOG00015000550	ssb	100	65.526	Scleropages_formosus
ENSFDAG00000000598	SSB	98	54.386	ENSSMAG00000013885	ssb	99	57.754	Scophthalmus_maximus
ENSFDAG00000000598	SSB	99	57.882	ENSSDUG00000020117	ssb	100	58.128	Seriola_dumerili
ENSFDAG00000000598	SSB	99	55.831	ENSSLDG00000002525	ssb	100	55.831	Seriola_lalandi_dorsalis
ENSFDAG00000000598	SSB	95	85.901	ENSSARG00000007747	SSB	100	85.901	Sorex_araneus
ENSFDAG00000000598	SSB	100	77.396	ENSSPUG00000012112	SSB	100	77.396	Sphenodon_punctatus
ENSFDAG00000000598	SSB	99	55.911	ENSSPAG00000005696	ssb	100	56.404	Stegastes_partitus
ENSFDAG00000000598	SSB	98	78.086	ENSSSCG00000015938	SSB	98	78.643	Sus_scrofa
ENSFDAG00000000598	SSB	100	75.550	ENSTGUG00000007942	SSB	100	75.550	Taeniopygia_guttata
ENSFDAG00000000598	SSB	99	57.178	ENSTRUG00000017839	ssb	100	57.778	Takifugu_rubripes
ENSFDAG00000000598	SSB	90	59.783	ENSTNIG00000000915	ssb	100	59.783	Tetraodon_nigroviridis
ENSFDAG00000000598	SSB	83	98.261	ENSTBEG00000009056	SSB	82	98.261	Tupaia_belangeri
ENSFDAG00000000598	SSB	100	94.089	ENSTTRG00000002152	SSB	100	94.089	Tursiops_truncatus
ENSFDAG00000000598	SSB	93	96.021	ENSUAMG00000027833	SSB	99	96.021	Ursus_americanus
ENSFDAG00000000598	SSB	100	95.074	ENSUMAG00000013907	SSB	100	95.074	Ursus_maritimus
ENSFDAG00000000598	SSB	100	94.568	ENSVPAG00000007183	SSB	100	94.568	Vicugna_pacos
ENSFDAG00000000598	SSB	100	95.074	ENSVVUG00000016573	SSB	78	95.074	Vulpes_vulpes
ENSFDAG00000000598	SSB	100	58.879	ENSXETG00000025402	ssb	100	60.606	Xenopus_tropicalis
ENSFDAG00000000598	SSB	94	55.091	ENSXCOG00000019109	ssb	99	55.352	Xiphophorus_couchianus
ENSFDAG00000000598	SSB	99	56.404	ENSXMAG00000004888	ssb	100	56.650	Xiphophorus_maculatus