EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000000604 (Gene tree)
Gene ID: 104869111
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 18768 bases
Position: chrKN122654.1:7922839-7941606
Accession: 104869111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013752	HAT	PF02184.16	8.5e-40	1	2
ENSFDAP00000013752	HAT	PF02184.16	8.5e-40	2	2
ENSFDAP00000013742	HAT	PF02184.16	1.4e-39	1	2
ENSFDAP00000013742	HAT	PF02184.16	1.4e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000001957	CRNKL1-202	3009	-	ENSFDAP00000013752	705 (aa)	-	-
ENSFDAT00000001933	CRNKL1-201	4878	XM_010634178	ENSFDAP00000013742	687 (aa)	XP_010632480	A0A091E1V7

Gene Model

Click here to download ENSFDAG00000000604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000604	CRNKL1	100	95.924	ENSG00000101343	CRNKL1	100	95.924	Homo_sapiens
ENSFDAG00000000604	CRNKL1	99	86.423	ENSAPOG00000009705	crnkl1	97	86.370	Acanthochromis_polyacanthus
ENSFDAG00000000604	CRNKL1	100	97.380	ENSAMEG00000000270	CRNKL1	83	97.380	Ailuropoda_melanoleuca
ENSFDAG00000000604	CRNKL1	98	86.499	ENSACIG00000015267	crnkl1	89	86.499	Amphilophus_citrinellus
ENSFDAG00000000604	CRNKL1	99	86.569	ENSAOCG00000021964	crnkl1	91	86.569	Amphiprion_ocellaris
ENSFDAG00000000604	CRNKL1	99	86.423	ENSAPEG00000015041	crnkl1	91	86.423	Amphiprion_percula
ENSFDAG00000000604	CRNKL1	99	85.882	ENSATEG00000001068	crnkl1	91	84.218	Anabas_testudineus
ENSFDAG00000000604	CRNKL1	99	90.247	ENSAPLG00000013105	CRNKL1	99	90.365	Anas_platyrhynchos
ENSFDAG00000000604	CRNKL1	99	92.533	ENSACAG00000005284	CRNKL1	99	92.533	Anolis_carolinensis
ENSFDAG00000000604	CRNKL1	92	96.044	ENSANAG00000024889	CRNKL1	100	96.044	Aotus_nancymaae
ENSFDAG00000000604	CRNKL1	99	87.297	ENSACLG00000010813	crnkl1	90	87.297	Astatotilapia_calliptera
ENSFDAG00000000604	CRNKL1	97	87.349	ENSAMXG00000018334	crnkl1	92	85.777	Astyanax_mexicanus
ENSFDAG00000000604	CRNKL1	100	96.070	ENSBTAG00000008472	CRNKL1	99	96.070	Bos_taurus
ENSFDAG00000000604	CRNKL1	93	62.830	WBGene00019762	M03F8.3	91	62.206	Caenorhabditis_elegans
ENSFDAG00000000604	CRNKL1	100	95.488	ENSCJAG00000005393	CRNKL1	100	95.488	Callithrix_jacchus
ENSFDAG00000000604	CRNKL1	100	97.089	ENSCAFG00000005333	CRNKL1	94	97.222	Canis_familiaris
ENSFDAG00000000604	CRNKL1	100	97.089	ENSCAFG00020027488	CRNKL1	100	97.089	Canis_lupus_dingo
ENSFDAG00000000604	CRNKL1	100	95.197	ENSCHIG00000013171	CRNKL1	99	95.197	Capra_hircus
ENSFDAG00000000604	CRNKL1	100	96.215	ENSTSYG00000004197	CRNKL1	100	96.215	Carlito_syrichta
ENSFDAG00000000604	CRNKL1	95	98.061	ENSCAPG00000010501	CRNKL1	99	98.061	Cavia_aperea
ENSFDAG00000000604	CRNKL1	100	98.108	ENSCPOG00000004418	CRNKL1	100	98.108	Cavia_porcellus
ENSFDAG00000000604	CRNKL1	100	95.488	ENSCCAG00000027037	CRNKL1	100	95.488	Cebus_capucinus
ENSFDAG00000000604	CRNKL1	100	95.633	ENSCATG00000034247	CRNKL1	100	95.633	Cercocebus_atys
ENSFDAG00000000604	CRNKL1	100	99.127	ENSCLAG00000013859	CRNKL1	100	99.127	Chinchilla_lanigera
ENSFDAG00000000604	CRNKL1	100	95.633	ENSCSAG00000011434	CRNKL1	100	95.633	Chlorocebus_sabaeus
ENSFDAG00000000604	CRNKL1	100	96.798	ENSCHOG00000006371	CRNKL1	84	96.798	Choloepus_hoffmanni
ENSFDAG00000000604	CRNKL1	99	93.723	ENSCPBG00000023501	CRNKL1	99	93.723	Chrysemys_picta_bellii
ENSFDAG00000000604	CRNKL1	96	69.486	ENSCING00000002709	-	99	68.047	Ciona_intestinalis
ENSFDAG00000000604	CRNKL1	100	95.779	ENSCANG00000038789	CRNKL1	100	95.779	Colobus_angolensis_palliatus
ENSFDAG00000000604	CRNKL1	100	97.962	ENSCGRG00001001115	-	99	97.962	Cricetulus_griseus_chok1gshd
ENSFDAG00000000604	CRNKL1	100	97.962	ENSCGRG00001000687	-	99	97.962	Cricetulus_griseus_chok1gshd
ENSFDAG00000000604	CRNKL1	100	97.962	ENSCGRG00000007854	Crnkl1	99	97.962	Cricetulus_griseus_crigri
ENSFDAG00000000604	CRNKL1	98	86.519	ENSCSEG00000005594	crnkl1	86	86.519	Cynoglossus_semilaevis
ENSFDAG00000000604	CRNKL1	97	87.387	ENSCVAG00000015172	crnkl1	92	85.401	Cyprinodon_variegatus
ENSFDAG00000000604	CRNKL1	96	86.707	ENSDARG00000007901	crnkl1	91	84.738	Danio_rerio
ENSFDAG00000000604	CRNKL1	99	97.515	ENSDNOG00000016226	CRNKL1	98	96.728	Dasypus_novemcinctus
ENSFDAG00000000604	CRNKL1	100	96.248	ENSDORG00000000394	-	100	96.248	Dipodomys_ordii
ENSFDAG00000000604	CRNKL1	97	87.612	ENSDORG00000030174	-	99	87.612	Dipodomys_ordii
ENSFDAG00000000604	CRNKL1	97	88.060	ENSDORG00000023724	-	99	88.060	Dipodomys_ordii
ENSFDAG00000000604	CRNKL1	96	69.670	FBgn0000377	crn	95	69.670	Drosophila_melanogaster
ENSFDAG00000000604	CRNKL1	100	84.134	ENSETEG00000003711	CRNKL1	84	84.134	Echinops_telfairi
ENSFDAG00000000604	CRNKL1	99	60.558	ENSEBUG00000013461	crnkl1	96	56.076	Eptatretus_burgeri
ENSFDAG00000000604	CRNKL1	100	97.089	ENSEASG00005002072	CRNKL1	100	97.089	Equus_asinus_asinus
ENSFDAG00000000604	CRNKL1	100	97.089	ENSECAG00000022215	CRNKL1	100	97.089	Equus_caballus
ENSFDAG00000000604	CRNKL1	99	94.118	ENSEEUG00000000413	CRNKL1	92	94.178	Erinaceus_europaeus
ENSFDAG00000000604	CRNKL1	98	85.075	ENSELUG00000015424	crnkl1	97	84.234	Esox_lucius
ENSFDAG00000000604	CRNKL1	100	97.380	ENSFCAG00000000714	CRNKL1	100	97.380	Felis_catus
ENSFDAG00000000604	CRNKL1	98	91.369	ENSFALG00000004611	CRNKL1	100	91.369	Ficedula_albicollis
ENSFDAG00000000604	CRNKL1	98	86.627	ENSFHEG00000013163	crnkl1	88	86.627	Fundulus_heteroclitus
ENSFDAG00000000604	CRNKL1	97	85.629	ENSGMOG00000007609	crnkl1	97	83.143	Gadus_morhua
ENSFDAG00000000604	CRNKL1	99	93.285	ENSGALG00000008429	CRNKL1	99	93.402	Gallus_gallus
ENSFDAG00000000604	CRNKL1	97	86.787	ENSGAFG00000014249	crnkl1	90	85.109	Gambusia_affinis
ENSFDAG00000000604	CRNKL1	99	84.357	ENSGACG00000011852	crnkl1	91	84.357	Gasterosteus_aculeatus
ENSFDAG00000000604	CRNKL1	95	92.378	ENSGAGG00000021233	CRNKL1	100	92.553	Gopherus_agassizii
ENSFDAG00000000604	CRNKL1	100	95.924	ENSGGOG00000014176	CRNKL1	100	95.924	Gorilla_gorilla
ENSFDAG00000000604	CRNKL1	99	87.149	ENSHBUG00000005246	crnkl1	90	87.149	Haplochromis_burtoni
ENSFDAG00000000604	CRNKL1	100	99.563	ENSHGLG00000010856	CRNKL1	100	99.563	Heterocephalus_glaber_female
ENSFDAG00000000604	CRNKL1	100	99.563	ENSHGLG00100011521	CRNKL1	100	99.563	Heterocephalus_glaber_male
ENSFDAG00000000604	CRNKL1	97	84.258	ENSHCOG00000006420	crnkl1	98	82.870	Hippocampus_comes
ENSFDAG00000000604	CRNKL1	94	86.903	ENSIPUG00000006751	crnkl1	93	85.075	Ictalurus_punctatus
ENSFDAG00000000604	CRNKL1	93	68.132	ENSIPUG00000000315	-	100	69.340	Ictalurus_punctatus
ENSFDAG00000000604	CRNKL1	97	75.038	ENSIPUG00000006836	-	99	74.260	Ictalurus_punctatus
ENSFDAG00000000604	CRNKL1	100	98.108	ENSSTOG00000014747	CRNKL1	100	98.108	Ictidomys_tridecemlineatus
ENSFDAG00000000604	CRNKL1	100	95.590	ENSJJAG00000016926	Crnkl1	100	95.590	Jaculus_jaculus
ENSFDAG00000000604	CRNKL1	99	86.510	ENSKMAG00000003620	crnkl1	86	86.530	Kryptolebias_marmoratus
ENSFDAG00000000604	CRNKL1	97	70.877	ENSLBEG00000003543	crnkl1	92	71.053	Labrus_bergylta
ENSFDAG00000000604	CRNKL1	99	87.848	ENSLACG00000001129	CRNKL1	99	87.848	Latimeria_chalumnae
ENSFDAG00000000604	CRNKL1	97	88.855	ENSLOCG00000016889	crnkl1	95	87.555	Lepisosteus_oculatus
ENSFDAG00000000604	CRNKL1	100	96.657	ENSLAFG00000004512	CRNKL1	100	96.657	Loxodonta_africana
ENSFDAG00000000604	CRNKL1	100	95.633	ENSMFAG00000039893	CRNKL1	100	95.633	Macaca_fascicularis
ENSFDAG00000000604	CRNKL1	100	95.633	ENSMMUG00000007709	CRNKL1	100	95.633	Macaca_mulatta
ENSFDAG00000000604	CRNKL1	100	95.633	ENSMNEG00000037490	CRNKL1	100	95.633	Macaca_nemestrina
ENSFDAG00000000604	CRNKL1	100	95.633	ENSMLEG00000034885	CRNKL1	100	95.633	Mandrillus_leucophaeus
ENSFDAG00000000604	CRNKL1	99	85.985	ENSMAMG00000008757	crnkl1	90	86.471	Mastacembelus_armatus
ENSFDAG00000000604	CRNKL1	99	87.297	ENSMZEG00005022345	crnkl1	90	87.297	Maylandia_zebra
ENSFDAG00000000604	CRNKL1	99	92.566	ENSMGAG00000003452	CRNKL1	94	92.679	Meleagris_gallopavo
ENSFDAG00000000604	CRNKL1	100	97.817	ENSMAUG00000020764	Crnkl1	99	97.817	Mesocricetus_auratus
ENSFDAG00000000604	CRNKL1	100	96.652	ENSMICG00000006048	CRNKL1	100	96.652	Microcebus_murinus
ENSFDAG00000000604	CRNKL1	100	89.557	ENSMOCG00000000681	-	99	89.557	Microtus_ochrogaster
ENSFDAG00000000604	CRNKL1	97	68.919	ENSMOCG00000004179	-	96	69.139	Microtus_ochrogaster
ENSFDAG00000000604	CRNKL1	92	84.945	ENSMMOG00000017601	crnkl1	97	84.945	Mola_mola
ENSFDAG00000000604	CRNKL1	100	91.523	ENSMODG00000005961	-	99	91.523	Monodelphis_domestica
ENSFDAG00000000604	CRNKL1	100	85.881	ENSMODG00000010857	-	99	86.257	Monodelphis_domestica
ENSFDAG00000000604	CRNKL1	98	62.594	ENSMALG00000011211	crnkl1	89	68.630	Monopterus_albus
ENSFDAG00000000604	CRNKL1	100	97.525	MGP_CAROLIEiJ_G0024394	Crnkl1	99	97.525	Mus_caroli
ENSFDAG00000000604	CRNKL1	100	97.671	ENSMUSG00000001767	Crnkl1	99	97.671	Mus_musculus
ENSFDAG00000000604	CRNKL1	100	95.779	MGP_PahariEiJ_G0025838	Crnkl1	99	95.779	Mus_pahari
ENSFDAG00000000604	CRNKL1	100	97.817	MGP_SPRETEiJ_G0025312	Crnkl1	99	97.817	Mus_spretus
ENSFDAG00000000604	CRNKL1	100	97.234	ENSMPUG00000001226	CRNKL1	100	97.234	Mustela_putorius_furo
ENSFDAG00000000604	CRNKL1	100	96.657	ENSMLUG00000016513	CRNKL1	89	96.657	Myotis_lucifugus
ENSFDAG00000000604	CRNKL1	100	95.571	ENSNGAG00000023097	Crnkl1	100	95.571	Nannospalax_galili
ENSFDAG00000000604	CRNKL1	99	87.445	ENSNBRG00000007867	crnkl1	89	87.445	Neolamprologus_brichardi
ENSFDAG00000000604	CRNKL1	100	92.431	ENSNLEG00000009862	CRNKL1	100	92.431	Nomascus_leucogenys
ENSFDAG00000000604	CRNKL1	100	85.610	ENSMEUG00000002361	-	99	85.839	Notamacropus_eugenii
ENSFDAG00000000604	CRNKL1	98	94.478	ENSMEUG00000012167	-	100	94.478	Notamacropus_eugenii
ENSFDAG00000000604	CRNKL1	75	66.602	ENSOPRG00000009242	-	61	66.602	Ochotona_princeps
ENSFDAG00000000604	CRNKL1	100	98.981	ENSODEG00000012175	CRNKL1	100	98.981	Octodon_degus
ENSFDAG00000000604	CRNKL1	99	87.740	ENSONIG00000018728	crnkl1	89	87.740	Oreochromis_niloticus
ENSFDAG00000000604	CRNKL1	99	97.376	ENSOCUG00000015484	CRNKL1	83	97.376	Oryctolagus_cuniculus
ENSFDAG00000000604	CRNKL1	99	83.066	ENSORLG00000017240	crnkl1	96	79.710	Oryzias_latipes
ENSFDAG00000000604	CRNKL1	97	85.135	ENSORLG00020001742	crnkl1	89	85.135	Oryzias_latipes_hni
ENSFDAG00000000604	CRNKL1	99	83.212	ENSORLG00015019564	crnkl1	89	85.135	Oryzias_latipes_hsok
ENSFDAG00000000604	CRNKL1	99	84.234	ENSOMEG00000019895	crnkl1	91	84.457	Oryzias_melastigma
ENSFDAG00000000604	CRNKL1	100	95.924	ENSOGAG00000011544	CRNKL1	100	95.924	Otolemur_garnettii
ENSFDAG00000000604	CRNKL1	99	96.324	ENSOARG00000002150	CRNKL1	89	96.361	Ovis_aries
ENSFDAG00000000604	CRNKL1	99	94.559	ENSPPAG00000027847	CRNKL1	83	94.614	Pan_paniscus
ENSFDAG00000000604	CRNKL1	100	97.380	ENSPPRG00000001955	CRNKL1	100	97.380	Panthera_pardus
ENSFDAG00000000604	CRNKL1	100	97.380	ENSPTIG00000007393	CRNKL1	100	97.380	Panthera_tigris_altaica
ENSFDAG00000000604	CRNKL1	100	95.779	ENSPTRG00000030609	CRNKL1	100	95.779	Pan_troglodytes
ENSFDAG00000000604	CRNKL1	100	95.633	ENSPANG00000017420	CRNKL1	100	95.633	Papio_anubis
ENSFDAG00000000604	CRNKL1	96	82.256	ENSPKIG00000017093	crnkl1	89	81.525	Paramormyrops_kingsleyae
ENSFDAG00000000604	CRNKL1	99	92.533	ENSPSIG00000012705	CRNKL1	99	92.533	Pelodiscus_sinensis
ENSFDAG00000000604	CRNKL1	99	79.619	ENSPMGG00000006263	crnkl1	96	79.234	Periophthalmus_magnuspinnatus
ENSFDAG00000000604	CRNKL1	100	97.962	ENSPEMG00000000073	-	99	97.962	Peromyscus_maniculatus_bairdii
ENSFDAG00000000604	CRNKL1	99	81.977	ENSPMAG00000002250	crnkl1	99	82.070	Petromyzon_marinus
ENSFDAG00000000604	CRNKL1	100	93.741	ENSPCIG00000025825	CRNKL1	96	93.741	Phascolarctos_cinereus
ENSFDAG00000000604	CRNKL1	97	86.637	ENSPFOG00000005102	crnkl1	93	84.738	Poecilia_formosa
ENSFDAG00000000604	CRNKL1	97	86.637	ENSPLAG00000007288	crnkl1	90	84.615	Poecilia_latipinna
ENSFDAG00000000604	CRNKL1	97	86.787	ENSPMEG00000008865	crnkl1	93	84.884	Poecilia_mexicana
ENSFDAG00000000604	CRNKL1	97	86.336	ENSPREG00000012615	crnkl1	92	84.627	Poecilia_reticulata
ENSFDAG00000000604	CRNKL1	99	95.882	ENSPPYG00000010747	CRNKL1	81	95.924	Pongo_abelii
ENSFDAG00000000604	CRNKL1	99	90.882	ENSPCAG00000003296	CRNKL1	85	91.082	Procavia_capensis
ENSFDAG00000000604	CRNKL1	99	95.441	ENSPCOG00000017608	CRNKL1	83	95.488	Propithecus_coquereli
ENSFDAG00000000604	CRNKL1	100	96.652	ENSPVAG00000006207	CRNKL1	83	96.784	Pteropus_vampyrus
ENSFDAG00000000604	CRNKL1	99	87.149	ENSPNYG00000001977	crnkl1	90	87.149	Pundamilia_nyererei
ENSFDAG00000000604	CRNKL1	98	87.910	ENSPNAG00000001507	crnkl1	98	83.406	Pygocentrus_nattereri
ENSFDAG00000000604	CRNKL1	100	97.671	ENSRNOG00000010587	Crnkl1	99	97.671	Rattus_norvegicus
ENSFDAG00000000604	CRNKL1	100	97.234	ENSRNOG00000040045	Crnkl1	99	97.234	Rattus_norvegicus
ENSFDAG00000000604	CRNKL1	100	95.488	ENSRBIG00000031770	CRNKL1	100	95.488	Rhinopithecus_bieti
ENSFDAG00000000604	CRNKL1	100	95.342	ENSRROG00000040450	CRNKL1	100	95.342	Rhinopithecus_roxellana
ENSFDAG00000000604	CRNKL1	94	37.736	YLR117C	CLF1	99	37.826	Saccharomyces_cerevisiae
ENSFDAG00000000604	CRNKL1	100	95.488	ENSSBOG00000029672	CRNKL1	100	95.488	Saimiri_boliviensis_boliviensis
ENSFDAG00000000604	CRNKL1	96	74.052	ENSSHAG00000011199	CRNKL1	99	74.052	Sarcophilus_harrisii
ENSFDAG00000000604	CRNKL1	96	87.160	ENSSFOG00015000946	crnkl1	90	85.072	Scleropages_formosus
ENSFDAG00000000604	CRNKL1	99	84.627	ENSSMAG00000007933	crnkl1	90	83.718	Scophthalmus_maximus
ENSFDAG00000000604	CRNKL1	99	80.412	ENSSDUG00000012625	crnkl1	87	80.412	Seriola_dumerili
ENSFDAG00000000604	CRNKL1	99	87.021	ENSSLDG00000021413	crnkl1	88	87.021	Seriola_lalandi_dorsalis
ENSFDAG00000000604	CRNKL1	100	95.924	ENSSARG00000006443	CRNKL1	82	95.924	Sorex_araneus
ENSFDAG00000000604	CRNKL1	99	92.240	ENSSPUG00000005254	CRNKL1	99	92.375	Sphenodon_punctatus
ENSFDAG00000000604	CRNKL1	97	87.988	ENSSPAG00000016150	crnkl1	90	84.935	Stegastes_partitus
ENSFDAG00000000604	CRNKL1	100	97.089	ENSSSCG00000038587	CRNKL1	99	97.089	Sus_scrofa
ENSFDAG00000000604	CRNKL1	99	91.691	ENSTGUG00000007645	CRNKL1	98	91.947	Taeniopygia_guttata
ENSFDAG00000000604	CRNKL1	98	80.149	ENSTRUG00000015417	crnkl1	90	79.529	Takifugu_rubripes
ENSFDAG00000000604	CRNKL1	97	84.558	ENSTNIG00000010710	crnkl1	99	83.333	Tetraodon_nigroviridis
ENSFDAG00000000604	CRNKL1	91	95.200	ENSTBEG00000001304	CRNKL1	82	95.253	Tupaia_belangeri
ENSFDAG00000000604	CRNKL1	91	92.640	ENSTTRG00000000484	CRNKL1	81	92.722	Tursiops_truncatus
ENSFDAG00000000604	CRNKL1	100	97.380	ENSUAMG00000018586	CRNKL1	100	97.380	Ursus_americanus
ENSFDAG00000000604	CRNKL1	100	97.380	ENSUMAG00000024957	CRNKL1	100	97.380	Ursus_maritimus
ENSFDAG00000000604	CRNKL1	100	97.089	ENSVVUG00000012559	CRNKL1	82	97.222	Vulpes_vulpes
ENSFDAG00000000604	CRNKL1	99	89.811	ENSXETG00000009698	crnkl1	99	89.912	Xenopus_tropicalis
ENSFDAG00000000604	CRNKL1	97	85.907	ENSXCOG00000000824	crnkl1	92	83.599	Xiphophorus_couchianus
ENSFDAG00000000604	CRNKL1	97	86.787	ENSXMAG00000006896	crnkl1	92	84.448	Xiphophorus_maculatus