EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000000846 (Gene tree)
Gene ID: 104859693
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 6445 bases
Position: chrKN121902.1:236180-242624
Accession: 104859693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013926	EXOSC1	PF10447.9	4.4e-15	1	1
ENSFDAP00000013926	ECR1_N	PF14382.6	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000002288	EXOSC1-201	1149	XM_010620395	ENSFDAP00000013926	195 (aa)	XP_010618697	UPI000155D7BB

Gene Model

Click here to download ENSFDAG00000000846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000846	EXOSC1	100	97.436	ENSG00000171311	EXOSC1	100	97.436	Homo_sapiens
ENSFDAG00000000846	EXOSC1	98	80.628	ENSAPOG00000007822	exosc1	98	80.628	Acanthochromis_polyacanthus
ENSFDAG00000000846	EXOSC1	100	98.974	ENSAMEG00000000129	EXOSC1	100	98.974	Ailuropoda_melanoleuca
ENSFDAG00000000846	EXOSC1	96	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSFDAG00000000846	EXOSC1	98	80.628	ENSAOCG00000010699	exosc1	98	80.628	Amphiprion_ocellaris
ENSFDAG00000000846	EXOSC1	92	70.950	ENSAPEG00000012690	exosc1	96	70.950	Amphiprion_percula
ENSFDAG00000000846	EXOSC1	98	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSFDAG00000000846	EXOSC1	99	85.492	ENSACAG00000002101	EXOSC1	99	85.492	Anolis_carolinensis
ENSFDAG00000000846	EXOSC1	100	98.974	ENSANAG00000034669	EXOSC1	100	98.974	Aotus_nancymaae
ENSFDAG00000000846	EXOSC1	98	80.628	ENSACLG00000021243	exosc1	98	80.628	Astatotilapia_calliptera
ENSFDAG00000000846	EXOSC1	98	82.199	ENSAMXG00000011116	exosc1	98	82.199	Astyanax_mexicanus
ENSFDAG00000000846	EXOSC1	100	98.462	ENSBTAG00000012699	EXOSC1	100	98.462	Bos_taurus
ENSFDAG00000000846	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSFDAG00000000846	EXOSC1	100	98.462	ENSCJAG00000016586	EXOSC1	100	98.462	Callithrix_jacchus
ENSFDAG00000000846	EXOSC1	100	98.462	ENSCAFG00000009068	EXOSC1	94	98.462	Canis_familiaris
ENSFDAG00000000846	EXOSC1	100	98.462	ENSCAFG00020006002	EXOSC1	94	98.462	Canis_lupus_dingo
ENSFDAG00000000846	EXOSC1	100	98.462	ENSCHIG00000015253	EXOSC1	100	98.462	Capra_hircus
ENSFDAG00000000846	EXOSC1	100	97.949	ENSTSYG00000000760	EXOSC1	100	97.949	Carlito_syrichta
ENSFDAG00000000846	EXOSC1	100	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSFDAG00000000846	EXOSC1	100	56.345	ENSCCAG00000023986	EXOSC1	100	56.345	Cebus_capucinus
ENSFDAG00000000846	EXOSC1	100	97.436	ENSCATG00000034114	EXOSC1	100	97.436	Cercocebus_atys
ENSFDAG00000000846	EXOSC1	100	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSFDAG00000000846	EXOSC1	100	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSFDAG00000000846	EXOSC1	96	85.027	ENSCHOG00000006477	EXOSC1	100	85.027	Choloepus_hoffmanni
ENSFDAG00000000846	EXOSC1	54	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSFDAG00000000846	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSFDAG00000000846	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSFDAG00000000846	EXOSC1	100	97.436	ENSCANG00000034159	EXOSC1	100	97.436	Colobus_angolensis_palliatus
ENSFDAG00000000846	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSFDAG00000000846	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSFDAG00000000846	EXOSC1	98	68.063	ENSCSEG00000007895	exosc1	95	68.063	Cynoglossus_semilaevis
ENSFDAG00000000846	EXOSC1	98	76.963	ENSCVAG00000016748	exosc1	98	76.963	Cyprinodon_variegatus
ENSFDAG00000000846	EXOSC1	98	81.152	ENSDARG00000059841	exosc1	98	81.152	Danio_rerio
ENSFDAG00000000846	EXOSC1	75	98.649	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSFDAG00000000846	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSFDAG00000000846	EXOSC1	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSFDAG00000000846	EXOSC1	100	96.923	ENSETEG00000002469	-	100	96.923	Echinops_telfairi
ENSFDAG00000000846	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSFDAG00000000846	EXOSC1	100	89.231	ENSEASG00005008684	EXOSC1	100	89.231	Equus_asinus_asinus
ENSFDAG00000000846	EXOSC1	61	79.832	ENSECAG00000010621	EXOSC1	71	79.832	Equus_caballus
ENSFDAG00000000846	EXOSC1	100	97.949	ENSEEUG00000005647	EXOSC1	100	97.949	Erinaceus_europaeus
ENSFDAG00000000846	EXOSC1	94	80.978	ENSELUG00000017369	exosc1	81	80.978	Esox_lucius
ENSFDAG00000000846	EXOSC1	100	98.974	ENSFCAG00000040563	EXOSC1	94	98.974	Felis_catus
ENSFDAG00000000846	EXOSC1	100	84.103	ENSFALG00000008450	EXOSC1	100	84.103	Ficedula_albicollis
ENSFDAG00000000846	EXOSC1	98	76.963	ENSFHEG00000009154	exosc1	98	76.963	Fundulus_heteroclitus
ENSFDAG00000000846	EXOSC1	98	80.628	ENSGMOG00000008993	exosc1	98	80.628	Gadus_morhua
ENSFDAG00000000846	EXOSC1	100	73.333	ENSGALG00000039917	EXOSC1	100	86.986	Gallus_gallus
ENSFDAG00000000846	EXOSC1	98	76.963	ENSGAFG00000010265	exosc1	94	76.963	Gambusia_affinis
ENSFDAG00000000846	EXOSC1	98	80.628	ENSGACG00000018936	exosc1	98	80.628	Gasterosteus_aculeatus
ENSFDAG00000000846	EXOSC1	100	85.641	ENSGAGG00000019192	EXOSC1	100	85.641	Gopherus_agassizii
ENSFDAG00000000846	EXOSC1	100	84.615	ENSGGOG00000003099	EXOSC1	100	84.615	Gorilla_gorilla
ENSFDAG00000000846	EXOSC1	98	80.628	ENSHBUG00000017857	exosc1	98	80.628	Haplochromis_burtoni
ENSFDAG00000000846	EXOSC1	100	99.487	ENSHGLG00000016927	EXOSC1	100	99.487	Heterocephalus_glaber_female
ENSFDAG00000000846	EXOSC1	100	99.487	ENSHGLG00100012208	EXOSC1	100	99.487	Heterocephalus_glaber_male
ENSFDAG00000000846	EXOSC1	98	79.581	ENSHCOG00000019882	exosc1	98	79.581	Hippocampus_comes
ENSFDAG00000000846	EXOSC1	98	81.152	ENSIPUG00000007685	exosc1	98	81.152	Ictalurus_punctatus
ENSFDAG00000000846	EXOSC1	100	98.974	ENSSTOG00000006615	EXOSC1	100	98.974	Ictidomys_tridecemlineatus
ENSFDAG00000000846	EXOSC1	63	82.787	ENSSTOG00000029860	-	93	82.787	Ictidomys_tridecemlineatus
ENSFDAG00000000846	EXOSC1	100	97.949	ENSJJAG00000013311	Exosc1	100	97.949	Jaculus_jaculus
ENSFDAG00000000846	EXOSC1	98	78.646	ENSKMAG00000001202	exosc1	81	78.646	Kryptolebias_marmoratus
ENSFDAG00000000846	EXOSC1	98	80.105	ENSLBEG00000011448	exosc1	98	80.105	Labrus_bergylta
ENSFDAG00000000846	EXOSC1	98	59.596	ENSLOCG00000003776	exosc1	99	59.596	Lepisosteus_oculatus
ENSFDAG00000000846	EXOSC1	100	98.974	ENSLAFG00000015983	EXOSC1	100	98.974	Loxodonta_africana
ENSFDAG00000000846	EXOSC1	100	97.436	ENSMFAG00000001493	EXOSC1	100	97.436	Macaca_fascicularis
ENSFDAG00000000846	EXOSC1	100	97.436	ENSMMUG00000020028	EXOSC1	100	90.452	Macaca_mulatta
ENSFDAG00000000846	EXOSC1	100	97.436	ENSMNEG00000029816	EXOSC1	100	97.436	Macaca_nemestrina
ENSFDAG00000000846	EXOSC1	100	91.795	ENSMLEG00000027643	EXOSC1	100	91.795	Mandrillus_leucophaeus
ENSFDAG00000000846	EXOSC1	98	81.152	ENSMAMG00000012200	exosc1	98	81.152	Mastacembelus_armatus
ENSFDAG00000000846	EXOSC1	98	80.628	ENSMZEG00005007042	exosc1	98	80.628	Maylandia_zebra
ENSFDAG00000000846	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSFDAG00000000846	EXOSC1	100	98.462	ENSMICG00000007664	EXOSC1	92	98.462	Microcebus_murinus
ENSFDAG00000000846	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSFDAG00000000846	EXOSC1	97	91.579	ENSMOCG00000017124	-	97	91.579	Microtus_ochrogaster
ENSFDAG00000000846	EXOSC1	99	59.794	ENSMMOG00000021403	exosc1	99	59.794	Mola_mola
ENSFDAG00000000846	EXOSC1	100	93.367	ENSMODG00000004213	EXOSC1	100	93.367	Monodelphis_domestica
ENSFDAG00000000846	EXOSC1	94	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSFDAG00000000846	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSFDAG00000000846	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSFDAG00000000846	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSFDAG00000000846	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSFDAG00000000846	EXOSC1	100	98.974	ENSMPUG00000017044	EXOSC1	100	98.974	Mustela_putorius_furo
ENSFDAG00000000846	EXOSC1	100	98.462	ENSMLUG00000009228	EXOSC1	100	98.462	Myotis_lucifugus
ENSFDAG00000000846	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSFDAG00000000846	EXOSC1	98	61.257	ENSNBRG00000024007	exosc1	97	61.257	Neolamprologus_brichardi
ENSFDAG00000000846	EXOSC1	100	96.923	ENSNLEG00000013872	EXOSC1	100	96.923	Nomascus_leucogenys
ENSFDAG00000000846	EXOSC1	59	92.174	ENSMEUG00000002246	EXOSC1	100	92.174	Notamacropus_eugenii
ENSFDAG00000000846	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSFDAG00000000846	EXOSC1	100	99.487	ENSODEG00000016709	EXOSC1	100	99.487	Octodon_degus
ENSFDAG00000000846	EXOSC1	98	80.628	ENSONIG00000017683	exosc1	98	80.628	Oreochromis_niloticus
ENSFDAG00000000846	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSFDAG00000000846	EXOSC1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSFDAG00000000846	EXOSC1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSFDAG00000000846	EXOSC1	98	79.167	ENSORLG00000011595	exosc1	98	79.167	Oryzias_latipes
ENSFDAG00000000846	EXOSC1	98	79.167	ENSORLG00020005831	exosc1	98	79.167	Oryzias_latipes_hni
ENSFDAG00000000846	EXOSC1	98	79.167	ENSORLG00015004317	exosc1	98	79.167	Oryzias_latipes_hsok
ENSFDAG00000000846	EXOSC1	98	63.874	ENSOMEG00000013907	exosc1	98	63.874	Oryzias_melastigma
ENSFDAG00000000846	EXOSC1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSFDAG00000000846	EXOSC1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSFDAG00000000846	EXOSC1	100	91.371	ENSPPAG00000039842	EXOSC1	100	91.371	Pan_paniscus
ENSFDAG00000000846	EXOSC1	100	98.974	ENSPPRG00000023366	EXOSC1	100	98.974	Panthera_pardus
ENSFDAG00000000846	EXOSC1	100	98.974	ENSPTIG00000017701	EXOSC1	100	98.974	Panthera_tigris_altaica
ENSFDAG00000000846	EXOSC1	100	97.436	ENSPTRG00000002808	EXOSC1	100	97.436	Pan_troglodytes
ENSFDAG00000000846	EXOSC1	100	97.436	ENSPANG00000021324	EXOSC1	100	97.436	Papio_anubis
ENSFDAG00000000846	EXOSC1	98	81.675	ENSPKIG00000016037	exosc1	98	81.675	Paramormyrops_kingsleyae
ENSFDAG00000000846	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSFDAG00000000846	EXOSC1	98	69.110	ENSPMGG00000014002	exosc1	98	69.110	Periophthalmus_magnuspinnatus
ENSFDAG00000000846	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSFDAG00000000846	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSFDAG00000000846	EXOSC1	100	94.359	ENSPCIG00000002210	EXOSC1	99	94.359	Phascolarctos_cinereus
ENSFDAG00000000846	EXOSC1	98	76.440	ENSPFOG00000006755	exosc1	94	76.440	Poecilia_formosa
ENSFDAG00000000846	EXOSC1	98	76.440	ENSPLAG00000005880	exosc1	98	76.440	Poecilia_latipinna
ENSFDAG00000000846	EXOSC1	98	76.440	ENSPMEG00000015598	exosc1	94	76.440	Poecilia_mexicana
ENSFDAG00000000846	EXOSC1	98	66.667	ENSPREG00000000405	exosc1	93	66.667	Poecilia_reticulata
ENSFDAG00000000846	EXOSC1	100	96.923	ENSPPYG00000002531	EXOSC1	100	96.923	Pongo_abelii
ENSFDAG00000000846	EXOSC1	100	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSFDAG00000000846	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSFDAG00000000846	EXOSC1	100	98.974	ENSPVAG00000003372	EXOSC1	100	98.974	Pteropus_vampyrus
ENSFDAG00000000846	EXOSC1	98	80.628	ENSPNYG00000021745	exosc1	98	80.628	Pundamilia_nyererei
ENSFDAG00000000846	EXOSC1	98	81.152	ENSPNAG00000001944	exosc1	98	81.152	Pygocentrus_nattereri
ENSFDAG00000000846	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSFDAG00000000846	EXOSC1	100	97.436	ENSRBIG00000035618	EXOSC1	100	97.436	Rhinopithecus_bieti
ENSFDAG00000000846	EXOSC1	100	97.436	ENSRROG00000032589	EXOSC1	92	97.436	Rhinopithecus_roxellana
ENSFDAG00000000846	EXOSC1	100	98.974	ENSSBOG00000000359	EXOSC1	100	98.974	Saimiri_boliviensis_boliviensis
ENSFDAG00000000846	EXOSC1	75	96.599	ENSSHAG00000018219	EXOSC1	100	96.599	Sarcophilus_harrisii
ENSFDAG00000000846	EXOSC1	97	78.421	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSFDAG00000000846	EXOSC1	98	83.246	ENSSFOG00015009069	exosc1	98	83.246	Scleropages_formosus
ENSFDAG00000000846	EXOSC1	98	81.152	ENSSMAG00000003721	exosc1	98	81.152	Scophthalmus_maximus
ENSFDAG00000000846	EXOSC1	98	81.152	ENSSDUG00000002993	exosc1	98	81.152	Seriola_dumerili
ENSFDAG00000000846	EXOSC1	98	81.152	ENSSLDG00000025181	exosc1	98	81.152	Seriola_lalandi_dorsalis
ENSFDAG00000000846	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSFDAG00000000846	EXOSC1	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSFDAG00000000846	EXOSC1	98	72.251	ENSSPAG00000016792	exosc1	82	72.251	Stegastes_partitus
ENSFDAG00000000846	EXOSC1	100	97.949	ENSSSCG00000010518	EXOSC1	91	97.949	Sus_scrofa
ENSFDAG00000000846	EXOSC1	98	82.292	ENSTGUG00000009692	EXOSC1	99	82.292	Taeniopygia_guttata
ENSFDAG00000000846	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSFDAG00000000846	EXOSC1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSFDAG00000000846	EXOSC1	100	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSFDAG00000000846	EXOSC1	94	98.913	ENSTTRG00000009887	EXOSC1	100	98.913	Tursiops_truncatus
ENSFDAG00000000846	EXOSC1	100	83.077	ENSUAMG00000010266	EXOSC1	100	83.077	Ursus_americanus
ENSFDAG00000000846	EXOSC1	100	83.077	ENSUMAG00000022002	EXOSC1	100	83.077	Ursus_maritimus
ENSFDAG00000000846	EXOSC1	100	98.462	ENSVVUG00000023192	EXOSC1	63	98.462	Vulpes_vulpes
ENSFDAG00000000846	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSFDAG00000000846	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSFDAG00000000846	EXOSC1	98	67.188	ENSXMAG00000023382	exosc1	93	67.188	Xiphophorus_maculatus