EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000000962 (Gene tree)
Gene ID: 104860539
Gene Symbol: -
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 21160 bases
Position: chrKN121974.1:1179711-1200870
Accession: 104860539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013994	FRG1	PF06229.12	5e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000002450	-	2594	XM_010621765	ENSFDAP00000013994	257 (aa)	XP_010620067	UPI00053FEEDD

Gene Model

Click here to download ENSFDAG00000000962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000000962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000000962	-	100	87.692	ENSFDAG00000012697	-	98	93.458

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000000962	-	100	96.899	ENSG00000109536	FRG1	100	99.138	Homo_sapiens
ENSFDAG00000000962	-	100	72.763	ENSAPOG00000001060	frg1	100	73.541	Acanthochromis_polyacanthus
ENSFDAG00000000962	-	100	98.062	ENSAMEG00000013503	FRG1	100	98.062	Ailuropoda_melanoleuca
ENSFDAG00000000962	-	87	74.439	ENSACIG00000022283	frg1	100	74.439	Amphilophus_citrinellus
ENSFDAG00000000962	-	87	74.439	ENSAOCG00000024240	frg1	88	73.894	Amphiprion_ocellaris
ENSFDAG00000000962	-	100	71.984	ENSAPEG00000002486	frg1	100	72.763	Amphiprion_percula
ENSFDAG00000000962	-	100	71.984	ENSATEG00000010414	frg1	100	71.206	Anabas_testudineus
ENSFDAG00000000962	-	100	88.327	ENSAPLG00000007785	-	100	88.327	Anas_platyrhynchos
ENSFDAG00000000962	-	100	82.101	ENSACAG00000006877	-	100	82.101	Anolis_carolinensis
ENSFDAG00000000962	-	100	96.887	ENSANAG00000020876	FRG1	100	96.887	Aotus_nancymaae
ENSFDAG00000000962	-	100	66.537	ENSACLG00000027065	frg1	100	64.615	Astatotilapia_calliptera
ENSFDAG00000000962	-	100	75.097	ENSAMXG00000032700	frg1	100	75.486	Astyanax_mexicanus
ENSFDAG00000000962	-	100	98.062	ENSBTAG00000007089	FRG1	100	98.062	Bos_taurus
ENSFDAG00000000962	-	99	42.125	WBGene00014177	frg-1	99	43.223	Caenorhabditis_elegans
ENSFDAG00000000962	-	100	96.887	ENSCJAG00000011272	FRG1	100	96.887	Callithrix_jacchus
ENSFDAG00000000962	-	100	98.062	ENSCAFG00000007135	FRG1	100	98.062	Canis_familiaris
ENSFDAG00000000962	-	83	98.592	ENSCAFG00020000082	-	85	98.592	Canis_lupus_dingo
ENSFDAG00000000962	-	100	98.062	ENSCHIG00000011585	-	100	98.062	Capra_hircus
ENSFDAG00000000962	-	98	69.170	ENSTSYG00000031599	-	100	68.775	Carlito_syrichta
ENSFDAG00000000962	-	92	97.468	ENSCAPG00000016056	-	97	97.468	Cavia_aperea
ENSFDAG00000000962	-	100	98.833	ENSCPOG00000022277	-	100	98.833	Cavia_porcellus
ENSFDAG00000000962	-	100	96.887	ENSCCAG00000024627	FRG1	100	96.887	Cebus_capucinus
ENSFDAG00000000962	-	100	96.899	ENSCATG00000029230	FRG1	100	96.899	Cercocebus_atys
ENSFDAG00000000962	-	100	66.537	ENSCLAG00000006068	-	100	66.537	Chinchilla_lanigera
ENSFDAG00000000962	-	100	81.783	ENSCLAG00000004960	-	100	81.008	Chinchilla_lanigera
ENSFDAG00000000962	-	99	67.323	ENSCLAG00000009263	-	100	66.929	Chinchilla_lanigera
ENSFDAG00000000962	-	100	98.833	ENSCLAG00000000370	-	100	98.833	Chinchilla_lanigera
ENSFDAG00000000962	-	84	91.204	ENSCSAG00000017729	-	100	91.204	Chlorocebus_sabaeus
ENSFDAG00000000962	-	100	96.899	ENSCSAG00000002899	FRG1	100	96.899	Chlorocebus_sabaeus
ENSFDAG00000000962	-	88	87.556	ENSCPBG00000009211	-	88	87.611	Chrysemys_picta_bellii
ENSFDAG00000000962	-	99	52.239	ENSCING00000005161	-	99	53.358	Ciona_intestinalis
ENSFDAG00000000962	-	51	53.788	ENSCSAVG00000008018	-	100	48.913	Ciona_savignyi
ENSFDAG00000000962	-	100	96.899	ENSCANG00000020991	FRG1	100	96.899	Colobus_angolensis_palliatus
ENSFDAG00000000962	-	100	94.186	ENSCGRG00001014998	Frg1	100	93.411	Cricetulus_griseus_chok1gshd
ENSFDAG00000000962	-	100	94.186	ENSCGRG00000011860	-	100	93.411	Cricetulus_griseus_crigri
ENSFDAG00000000962	-	100	76.654	ENSCGRG00000003902	-	96	76.654	Cricetulus_griseus_crigri
ENSFDAG00000000962	-	96	69.512	ENSCSEG00000015950	frg1	100	69.512	Cynoglossus_semilaevis
ENSFDAG00000000962	-	100	70.817	ENSCVAG00000009985	frg1	100	71.595	Cyprinodon_variegatus
ENSFDAG00000000962	-	100	75.486	ENSDARG00000056504	frg1	100	75.875	Danio_rerio
ENSFDAG00000000962	-	100	97.287	ENSDNOG00000014886	FRG1	100	97.287	Dasypus_novemcinctus
ENSFDAG00000000962	-	100	81.783	ENSDORG00000016190	Frg1	100	84.109	Dipodomys_ordii
ENSFDAG00000000962	-	83	51.628	FBgn0036964	FRG1	81	51.628	Drosophila_melanogaster
ENSFDAG00000000962	-	100	92.248	ENSETEG00000012349	-	100	91.473	Echinops_telfairi
ENSFDAG00000000962	-	58	52.703	ENSEBUG00000012359	FRG1	89	52.703	Eptatretus_burgeri
ENSFDAG00000000962	-	100	96.498	ENSEASG00005017497	FRG1	100	96.498	Equus_asinus_asinus
ENSFDAG00000000962	-	100	96.498	ENSECAG00000003122	FRG1	100	96.498	Equus_caballus
ENSFDAG00000000962	-	61	98.089	ENSEEUG00000000145	-	100	98.089	Erinaceus_europaeus
ENSFDAG00000000962	-	100	73.541	ENSELUG00000021712	frg1	100	73.152	Esox_lucius
ENSFDAG00000000962	-	100	98.062	ENSFCAG00000025737	FRG1	100	98.062	Felis_catus
ENSFDAG00000000962	-	87	86.099	ENSFALG00000011231	-	88	86.283	Ficedula_albicollis
ENSFDAG00000000962	-	100	69.650	ENSFHEG00000010540	frg1	100	70.428	Fundulus_heteroclitus
ENSFDAG00000000962	-	100	69.650	ENSGMOG00000000867	frg1	100	69.650	Gadus_morhua
ENSFDAG00000000962	-	100	85.992	ENSGALG00000013590	-	100	85.992	Gallus_gallus
ENSFDAG00000000962	-	81	69.378	ENSGAFG00000013855	frg1	100	68.900	Gambusia_affinis
ENSFDAG00000000962	-	100	71.595	ENSGACG00000016888	frg1	100	71.206	Gasterosteus_aculeatus
ENSFDAG00000000962	-	100	86.381	ENSGAGG00000025012	-	100	86.381	Gopherus_agassizii
ENSFDAG00000000962	-	69	84.831	ENSGGOG00000012888	-	90	84.831	Gorilla_gorilla
ENSFDAG00000000962	-	100	63.566	ENSGGOG00000040796	-	100	63.178	Gorilla_gorilla
ENSFDAG00000000962	-	100	70.428	ENSHBUG00000010667	frg1	100	71.206	Haplochromis_burtoni
ENSFDAG00000000962	-	99	93.359	ENSHGLG00000020943	-	99	93.359	Heterocephalus_glaber_female
ENSFDAG00000000962	-	100	81.323	ENSHGLG00000001211	-	100	82.101	Heterocephalus_glaber_female
ENSFDAG00000000962	-	100	99.222	ENSHGLG00000005601	FRG1	100	99.222	Heterocephalus_glaber_female
ENSFDAG00000000962	-	99	95.312	ENSHGLG00000020402	-	94	95.312	Heterocephalus_glaber_female
ENSFDAG00000000962	-	100	81.712	ENSHGLG00100010674	-	100	82.490	Heterocephalus_glaber_male
ENSFDAG00000000962	-	100	98.833	ENSHGLG00100016261	-	100	98.833	Heterocephalus_glaber_male
ENSFDAG00000000962	-	99	93.359	ENSHGLG00100021211	-	99	93.359	Heterocephalus_glaber_male
ENSFDAG00000000962	-	100	77.043	ENSHGLG00100015285	-	100	77.043	Heterocephalus_glaber_male
ENSFDAG00000000962	-	87	71.749	ENSHCOG00000000224	frg1	95	71.749	Hippocampus_comes
ENSFDAG00000000962	-	100	73.152	ENSIPUG00000022716	frg1	100	73.152	Ictalurus_punctatus
ENSFDAG00000000962	-	100	96.512	ENSSTOG00000002857	-	100	96.512	Ictidomys_tridecemlineatus
ENSFDAG00000000962	-	100	97.287	ENSJJAG00000020625	Frg1	100	97.287	Jaculus_jaculus
ENSFDAG00000000962	-	100	70.039	ENSKMAG00000005841	frg1	100	70.039	Kryptolebias_marmoratus
ENSFDAG00000000962	-	100	70.039	ENSLBEG00000001466	frg1	100	70.039	Labrus_bergylta
ENSFDAG00000000962	-	100	69.466	ENSLACG00000010243	frg1	100	70.992	Latimeria_chalumnae
ENSFDAG00000000962	-	100	73.930	ENSLOCG00000013868	frg1	100	77.432	Lepisosteus_oculatus
ENSFDAG00000000962	-	100	93.411	ENSLAFG00000011191	FRG1	100	93.798	Loxodonta_africana
ENSFDAG00000000962	-	83	86.977	ENSMFAG00000042873	-	89	86.977	Macaca_fascicularis
ENSFDAG00000000962	-	100	96.899	ENSMFAG00000031178	FRG1	100	96.899	Macaca_fascicularis
ENSFDAG00000000962	-	100	96.899	ENSMMUG00000001824	FRG1	100	96.899	Macaca_mulatta
ENSFDAG00000000962	-	79	86.765	ENSMMUG00000047496	-	88	86.765	Macaca_mulatta
ENSFDAG00000000962	-	96	88.664	ENSMNEG00000018620	FRG1	100	87.449	Macaca_nemestrina
ENSFDAG00000000962	-	100	96.899	ENSMLEG00000028881	FRG1	100	96.899	Mandrillus_leucophaeus
ENSFDAG00000000962	-	100	71.595	ENSMAMG00000012406	frg1	100	72.374	Mastacembelus_armatus
ENSFDAG00000000962	-	100	70.039	ENSMZEG00005007549	frg1	100	70.817	Maylandia_zebra
ENSFDAG00000000962	-	100	86.770	ENSMGAG00000011481	-	100	86.770	Meleagris_gallopavo
ENSFDAG00000000962	-	100	96.512	ENSMAUG00000000847	Frg1	100	96.512	Mesocricetus_auratus
ENSFDAG00000000962	-	100	97.674	ENSMICG00000046816	FRG1	100	97.674	Microcebus_murinus
ENSFDAG00000000962	-	100	87.209	ENSMOCG00000023000	Frg1	100	86.047	Microtus_ochrogaster
ENSFDAG00000000962	-	87	70.404	ENSMMOG00000004008	frg1	94	70.404	Mola_mola
ENSFDAG00000000962	-	100	89.922	ENSMODG00000019031	-	87	89.147	Monodelphis_domestica
ENSFDAG00000000962	-	100	71.984	ENSMALG00000018497	frg1	100	72.374	Monopterus_albus
ENSFDAG00000000962	-	100	96.124	MGP_CAROLIEiJ_G0031006	Frg1	100	96.124	Mus_caroli
ENSFDAG00000000962	-	100	96.124	ENSMUSG00000031590	Frg1	100	96.124	Mus_musculus
ENSFDAG00000000962	-	100	94.186	MGP_PahariEiJ_G0021475	Frg1	100	93.023	Mus_pahari
ENSFDAG00000000962	-	100	94.186	MGP_SPRETEiJ_G0032120	Frg1	100	93.023	Mus_spretus
ENSFDAG00000000962	-	100	98.062	ENSMPUG00000017962	FRG1	100	98.062	Mustela_putorius_furo
ENSFDAG00000000962	-	100	96.498	ENSMLUG00000023179	FRG1	100	96.498	Myotis_lucifugus
ENSFDAG00000000962	-	100	96.899	ENSNGAG00000016411	Frg1	100	96.899	Nannospalax_galili
ENSFDAG00000000962	-	81	67.464	ENSNBRG00000006806	frg1	95	67.464	Neolamprologus_brichardi
ENSFDAG00000000962	-	100	81.081	ENSNLEG00000032333	-	100	81.081	Nomascus_leucogenys
ENSFDAG00000000962	-	79	86.634	ENSNLEG00000036059	-	86	86.634	Nomascus_leucogenys
ENSFDAG00000000962	-	100	81.609	ENSNLEG00000035849	-	100	81.609	Nomascus_leucogenys
ENSFDAG00000000962	-	79	85.644	ENSNLEG00000028874	-	91	85.644	Nomascus_leucogenys
ENSFDAG00000000962	-	100	96.109	ENSNLEG00000000930	FRG1	100	96.109	Nomascus_leucogenys
ENSFDAG00000000962	-	100	70.039	ENSNLEG00000032846	-	100	90.179	Nomascus_leucogenys
ENSFDAG00000000962	-	59	93.421	ENSMEUG00000007509	-	59	93.421	Notamacropus_eugenii
ENSFDAG00000000962	-	100	79.377	ENSOPRG00000004722	-	100	79.377	Ochotona_princeps
ENSFDAG00000000962	-	100	74.708	ENSODEG00000006953	-	100	73.152	Octodon_degus
ENSFDAG00000000962	-	100	98.833	ENSODEG00000006458	-	100	98.833	Octodon_degus
ENSFDAG00000000962	-	100	70.155	ENSONIG00000010162	frg1	100	70.930	Oreochromis_niloticus
ENSFDAG00000000962	-	67	91.813	ENSOANG00000005659	-	76	91.813	Ornithorhynchus_anatinus
ENSFDAG00000000962	-	100	98.062	ENSOCUG00000009038	-	100	98.062	Oryctolagus_cuniculus
ENSFDAG00000000962	-	96	69.919	ENSORLG00000008106	frg1	89	69.919	Oryzias_latipes
ENSFDAG00000000962	-	100	70.428	ENSORLG00020014355	frg1	100	70.428	Oryzias_latipes_hni
ENSFDAG00000000962	-	100	70.428	ENSORLG00015014159	frg1	100	70.428	Oryzias_latipes_hsok
ENSFDAG00000000962	-	84	71.296	ENSOMEG00000002468	frg1	88	71.296	Oryzias_melastigma
ENSFDAG00000000962	-	100	96.124	ENSOGAG00000005749	-	100	96.124	Otolemur_garnettii
ENSFDAG00000000962	-	100	95.402	ENSOARG00000008592	FRG1	100	95.402	Ovis_aries
ENSFDAG00000000962	-	96	69.767	ENSPPAG00000043174	-	100	69.767	Pan_paniscus
ENSFDAG00000000962	-	84	92.593	ENSPPAG00000043170	-	100	94.444	Pan_paniscus
ENSFDAG00000000962	-	100	97.674	ENSPPRG00000025003	-	100	97.674	Panthera_pardus
ENSFDAG00000000962	-	100	94.942	ENSPPRG00000019777	-	100	94.942	Panthera_pardus
ENSFDAG00000000962	-	100	95.331	ENSPTIG00000006566	-	100	95.331	Panthera_tigris_altaica
ENSFDAG00000000962	-	100	97.287	ENSPTIG00000006588	-	100	97.287	Panthera_tigris_altaica
ENSFDAG00000000962	-	96	76.613	ENSPTRG00000044710	-	100	76.210	Pan_troglodytes
ENSFDAG00000000962	-	100	96.899	ENSPTRG00000016671	-	100	96.899	Pan_troglodytes
ENSFDAG00000000962	-	89	80.519	ENSPTRG00000043123	-	94	80.687	Pan_troglodytes
ENSFDAG00000000962	-	95	77.459	ENSPTRG00000052363	-	94	95.050	Pan_troglodytes
ENSFDAG00000000962	-	96	74.194	ENSPTRG00000050204	-	100	73.790	Pan_troglodytes
ENSFDAG00000000962	-	100	96.899	ENSPTRG00000050205	-	100	96.899	Pan_troglodytes
ENSFDAG00000000962	-	70	85.556	ENSPANG00000031530	-	84	87.222	Papio_anubis
ENSFDAG00000000962	-	100	70.817	ENSPKIG00000024189	frg1	100	70.817	Paramormyrops_kingsleyae
ENSFDAG00000000962	-	84	87.500	ENSPSIG00000017971	-	82	87.500	Pelodiscus_sinensis
ENSFDAG00000000962	-	98	66.135	ENSPMGG00000019273	frg1	100	65.737	Periophthalmus_magnuspinnatus
ENSFDAG00000000962	-	100	96.124	ENSPEMG00000000650	Frg1	100	96.124	Peromyscus_maniculatus_bairdii
ENSFDAG00000000962	-	100	89.147	ENSPCIG00000007530	-	69	89.147	Phascolarctos_cinereus
ENSFDAG00000000962	-	100	70.039	ENSPFOG00000006721	frg1	100	69.650	Poecilia_formosa
ENSFDAG00000000962	-	100	70.428	ENSPMEG00000013816	frg1	100	70.039	Poecilia_mexicana
ENSFDAG00000000962	-	100	69.650	ENSPREG00000000097	frg1	100	69.261	Poecilia_reticulata
ENSFDAG00000000962	-	56	96.552	ENSPPYG00000029810	-	100	96.552	Pongo_abelii
ENSFDAG00000000962	-	61	91.139	ENSPPYG00000011275	-	87	91.139	Pongo_abelii
ENSFDAG00000000962	-	95	91.463	ENSPCAG00000014953	-	100	89.431	Procavia_capensis
ENSFDAG00000000962	-	100	67.054	ENSPCOG00000022726	FRG1	100	67.054	Propithecus_coquereli
ENSFDAG00000000962	-	100	82.558	ENSPVAG00000010551	FRG1	100	82.558	Pteropus_vampyrus
ENSFDAG00000000962	-	67	74.269	ENSPNYG00000015209	frg1	74	74.269	Pundamilia_nyererei
ENSFDAG00000000962	-	100	71.984	ENSPNAG00000013259	frg1	100	71.206	Pygocentrus_nattereri
ENSFDAG00000000962	-	100	93.023	ENSRNOG00000009846	Frg1	100	91.860	Rattus_norvegicus
ENSFDAG00000000962	-	87	93.778	ENSRBIG00000042219	-	94	95.111	Rhinopithecus_bieti
ENSFDAG00000000962	-	82	90.995	ENSRROG00000032084	-	94	89.423	Rhinopithecus_roxellana
ENSFDAG00000000962	-	100	93.798	ENSRROG00000015523	FRG1	100	93.798	Rhinopithecus_roxellana
ENSFDAG00000000962	-	100	96.109	ENSSBOG00000034175	FRG1	100	96.109	Saimiri_boliviensis_boliviensis
ENSFDAG00000000962	-	100	88.372	ENSSHAG00000005886	-	100	88.760	Sarcophilus_harrisii
ENSFDAG00000000962	-	97	71.486	ENSSFOG00015021361	frg1	99	71.486	Scleropages_formosus
ENSFDAG00000000962	-	100	70.039	ENSSMAG00000001213	frg1	100	69.650	Scophthalmus_maximus
ENSFDAG00000000962	-	100	70.817	ENSSDUG00000018886	frg1	100	71.595	Seriola_dumerili
ENSFDAG00000000962	-	100	71.206	ENSSLDG00000024191	frg1	100	70.817	Seriola_lalandi_dorsalis
ENSFDAG00000000962	-	67	94.737	ENSSARG00000002471	-	94	94.350	Sorex_araneus
ENSFDAG00000000962	-	100	79.377	ENSSPUG00000017326	-	96	84.211	Sphenodon_punctatus
ENSFDAG00000000962	-	100	68.872	ENSSPAG00000013294	frg1	100	67.704	Stegastes_partitus
ENSFDAG00000000962	-	100	97.287	ENSSSCG00000006996	FRG1	100	97.287	Sus_scrofa
ENSFDAG00000000962	-	100	85.992	ENSTGUG00000007028	-	100	85.992	Taeniopygia_guttata
ENSFDAG00000000962	-	100	71.595	ENSTRUG00000016208	frg1	100	71.595	Takifugu_rubripes
ENSFDAG00000000962	-	100	69.261	ENSTNIG00000007128	frg1	100	70.817	Tetraodon_nigroviridis
ENSFDAG00000000962	-	83	67.606	ENSTBEG00000012789	-	100	67.606	Tupaia_belangeri
ENSFDAG00000000962	-	100	94.186	ENSTBEG00000014491	-	100	93.023	Tupaia_belangeri
ENSFDAG00000000962	-	77	61.809	ENSTBEG00000017605	-	99	61.809	Tupaia_belangeri
ENSFDAG00000000962	-	100	97.287	ENSTTRG00000003429	FRG1	100	97.287	Tursiops_truncatus
ENSFDAG00000000962	-	96	89.431	ENSUAMG00000012123	-	100	89.024	Ursus_americanus
ENSFDAG00000000962	-	100	98.062	ENSUMAG00000021119	FRG1	100	98.062	Ursus_maritimus
ENSFDAG00000000962	-	92	97.034	ENSVPAG00000011977	-	99	97.034	Vicugna_pacos
ENSFDAG00000000962	-	100	94.961	ENSVPAG00000000616	FRG1	100	94.961	Vicugna_pacos
ENSFDAG00000000962	-	83	98.592	ENSVVUG00000007181	-	77	98.592	Vulpes_vulpes
ENSFDAG00000000962	-	100	81.323	ENSXETG00000012470	frg1	100	81.323	Xenopus_tropicalis
ENSFDAG00000000962	-	100	65.370	ENSXCOG00000005312	frg1	100	65.370	Xiphophorus_couchianus
ENSFDAG00000000962	-	100	69.650	ENSXMAG00000007751	frg1	100	69.261	Xiphophorus_maculatus