EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000001213 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 4044 bases
Position: chrKN121670.1:4955848-4959891
Accession: 104858417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000014132	RRM_1	PF00076.22	6.7e-14	1	1
ENSFDAP00000014140	RRM_1	PF00076.22	7.5e-14	1	1
ENSFDAP00000014126	RRM_1	PF00076.22	8.2e-14	1	1
ENSFDAP00000014129	RRM_1	PF00076.22	8.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000002726	ALYREF-203	615	-	ENSFDAP00000014132	204 (aa)	-	-
ENSFDAT00000002701	ALYREF-201	1109	XM_010618640	ENSFDAP00000014126	227 (aa)	XP_010616942	-
ENSFDAT00000002742	ALYREF-204	651	-	ENSFDAP00000014140	216 (aa)	-	-
ENSFDAT00000002720	ALYREF-202	684	-	ENSFDAP00000014129	227 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000001213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000001213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000001213	ALYREF	93	85.922	ENSG00000183684	ALYREF	78	87.379	Homo_sapiens
ENSFDAG00000001213	ALYREF	90	68.396	ENSAPOG00000018455	ALYREF	88	66.529	Acanthochromis_polyacanthus
ENSFDAG00000001213	ALYREF	91	85.024	ENSAMEG00000017463	ALYREF	82	83.251	Ailuropoda_melanoleuca
ENSFDAG00000001213	ALYREF	90	82.915	ENSACAG00000010526	ALYREF	78	81.863	Anolis_carolinensis
ENSFDAG00000001213	ALYREF	82	95.210	ENSANAG00000022638	-	81	90.052	Aotus_nancymaae
ENSFDAG00000001213	ALYREF	92	75.521	ENSANAG00000028229	-	70	70.485	Aotus_nancymaae
ENSFDAG00000001213	ALYREF	93	87.379	ENSBTAG00000008498	ALYREF	80	88.835	Bos_taurus
ENSFDAG00000001213	ALYREF	93	85.437	ENSCJAG00000039942	ALYREF	78	86.893	Callithrix_jacchus
ENSFDAG00000001213	ALYREF	93	87.864	ENSCAFG00000005877	ALYREF	83	87.442	Canis_familiaris
ENSFDAG00000001213	ALYREF	93	87.864	ENSCAFG00020009815	ALYREF	83	87.442	Canis_lupus_dingo
ENSFDAG00000001213	ALYREF	95	86.256	ENSCHIG00000017396	ALYREF	83	87.374	Capra_hircus
ENSFDAG00000001213	ALYREF	82	97.024	ENSTSYG00000002272	ALYREF	72	97.590	Carlito_syrichta
ENSFDAG00000001213	ALYREF	61	96.183	ENSCAPG00000014727	-	100	92.537	Cavia_aperea
ENSFDAG00000001213	ALYREF	93	86.893	ENSCPOG00000013710	ALYREF	88	88.776	Cavia_porcellus
ENSFDAG00000001213	ALYREF	93	86.893	ENSCCAG00000020578	-	78	87.317	Cebus_capucinus
ENSFDAG00000001213	ALYREF	92	81.152	ENSCCAG00000030237	-	88	77.487	Cebus_capucinus
ENSFDAG00000001213	ALYREF	94	85.577	ENSCATG00000033169	ALYREF	81	86.047	Cercocebus_atys
ENSFDAG00000001213	ALYREF	81	99.398	ENSCLAG00000015026	ALYREF	89	91.146	Chinchilla_lanigera
ENSFDAG00000001213	ALYREF	93	86.408	ENSCSAG00000002216	ALYREF	81	86.047	Chlorocebus_sabaeus
ENSFDAG00000001213	ALYREF	85	93.642	ENSCANG00000034056	ALYREF	88	92.169	Colobus_angolensis_palliatus
ENSFDAG00000001213	ALYREF	92	87.958	ENSCGRG00001018191	-	89	84.343	Cricetulus_griseus_chok1gshd
ENSFDAG00000001213	ALYREF	94	86.634	ENSCGRG00000015871	-	98	80.676	Cricetulus_griseus_crigri
ENSFDAG00000001213	ALYREF	51	66.964	ENSCSEG00000015438	-	84	56.494	Cynoglossus_semilaevis
ENSFDAG00000001213	ALYREF	81	95.429	ENSDNOG00000002563	ALYREF	94	82.432	Dasypus_novemcinctus
ENSFDAG00000001213	ALYREF	92	89.447	ENSDORG00000025849	-	93	81.385	Dipodomys_ordii
ENSFDAG00000001213	ALYREF	81	94.857	ENSETEG00000016596	ALYREF	100	93.820	Echinops_telfairi
ENSFDAG00000001213	ALYREF	93	86.893	ENSEASG00005005824	ALYREF	76	88.350	Equus_asinus_asinus
ENSFDAG00000001213	ALYREF	93	86.893	ENSECAG00000018754	ALYREF	76	88.350	Equus_caballus
ENSFDAG00000001213	ALYREF	59	79.389	ENSEEUG00000010164	ALYREF	72	85.484	Erinaceus_europaeus
ENSFDAG00000001213	ALYREF	93	86.893	ENSFCAG00000022549	ALYREF	78	88.350	Felis_catus
ENSFDAG00000001213	ALYREF	89	86.735	ENSGALG00000007237	ALYREF	82	84.211	Gallus_gallus
ENSFDAG00000001213	ALYREF	90	72.500	ENSGACG00000013328	ALYREF	81	70.423	Gasterosteus_aculeatus
ENSFDAG00000001213	ALYREF	90	85.930	ENSGAGG00000008536	ALYREF	78	85.644	Gopherus_agassizii
ENSFDAG00000001213	ALYREF	93	86.408	ENSGGOG00000013935	ALYREF	79	88.293	Gorilla_gorilla
ENSFDAG00000001213	ALYREF	93	89.756	ENSHGLG00000008293	ALYREF	89	88.776	Heterocephalus_glaber_female
ENSFDAG00000001213	ALYREF	88	94.472	ENSHGLG00100006949	ALYREF	85	94.472	Heterocephalus_glaber_male
ENSFDAG00000001213	ALYREF	89	67.822	ENSHCOG00000015046	ALYREF	87	64.681	Hippocampus_comes
ENSFDAG00000001213	ALYREF	92	85.366	ENSJJAG00000004134	-	80	85.437	Jaculus_jaculus
ENSFDAG00000001213	ALYREF	90	73.399	ENSLACG00000005694	ALYREF	81	74.528	Latimeria_chalumnae
ENSFDAG00000001213	ALYREF	81	96.591	ENSLAFG00000003083	ALYREF	95	96.648	Loxodonta_africana
ENSFDAG00000001213	ALYREF	81	96.023	ENSMFAG00000001394	ALYREF	70	96.089	Macaca_fascicularis
ENSFDAG00000001213	ALYREF	93	86.893	ENSMMUG00000012884	ALYREF	81	86.047	Macaca_mulatta
ENSFDAG00000001213	ALYREF	94	85.577	ENSMNEG00000043666	ALYREF	81	86.047	Macaca_nemestrina
ENSFDAG00000001213	ALYREF	85	93.642	ENSMLEG00000043353	ALYREF	86	87.166	Mandrillus_leucophaeus
ENSFDAG00000001213	ALYREF	83	96.532	ENSMAUG00000020552	-	89	96.532	Mesocricetus_auratus
ENSFDAG00000001213	ALYREF	84	93.407	ENSMICG00000017403	ALYREF	78	84.466	Microcebus_murinus
ENSFDAG00000001213	ALYREF	89	92.228	ENSMOCG00000016792	-	89	88.000	Microtus_ochrogaster
ENSFDAG00000001213	ALYREF	93	87.440	ENSMODG00000003030	ALYREF	70	86.047	Monodelphis_domestica
ENSFDAG00000001213	ALYREF	90	72.170	ENSMALG00000019408	ALYREF	80	72.018	Monopterus_albus
ENSFDAG00000001213	ALYREF	93	88.293	MGP_CAROLIEiJ_G0017529	Alyref	80	85.784	Mus_caroli
ENSFDAG00000001213	ALYREF	91	81.122	MGP_CAROLIEiJ_G0014874	Alyref2	88	80.102	Mus_caroli
ENSFDAG00000001213	ALYREF	80	69.000	ENSMUSG00000095022	Gm20765	79	60.000	Mus_musculus
ENSFDAG00000001213	ALYREF	80	69.000	ENSMUSG00000097550	Gm21304	79	60.000	Mus_musculus
ENSFDAG00000001213	ALYREF	91	64.563	ENSMUSG00000117091	AC153137.1	77	66.129	Mus_musculus
ENSFDAG00000001213	ALYREF	80	69.000	ENSMUSG00000097427	Gm6763	60	81.818	Mus_musculus
ENSFDAG00000001213	ALYREF	90	65.854	ENSMUSG00000086727	4931428L18Rik	78	62.371	Mus_musculus
ENSFDAG00000001213	ALYREF	83	70.166	ENSMUSG00000094314	Gm4301	51	70.748	Mus_musculus
ENSFDAG00000001213	ALYREF	83	69.444	ENSMUSG00000096744	Gm4307	51	70.861	Mus_musculus
ENSFDAG00000001213	ALYREF	80	69.000	ENSMUSG00000097878	Gm8764	60	81.818	Mus_musculus
ENSFDAG00000001213	ALYREF	80	69.000	ENSMUSG00000094144	Gm21312	79	60.000	Mus_musculus
ENSFDAG00000001213	ALYREF	83	70.166	ENSMUSG00000096640	Gm4312	51	70.748	Mus_musculus
ENSFDAG00000001213	ALYREF	91	84.293	ENSMUSG00000060244	Alyref2	88	83.246	Mus_musculus
ENSFDAG00000001213	ALYREF	83	69.444	ENSMUSG00000112856	Gm4305	51	70.861	Mus_musculus
ENSFDAG00000001213	ALYREF	83	69.613	ENSMUSG00000091101	Gm4302	50	70.861	Mus_musculus
ENSFDAG00000001213	ALYREF	80	67.647	ENSMUSG00000090854	Gm4340	79	56.938	Mus_musculus
ENSFDAG00000001213	ALYREF	80	69.000	ENSMUSG00000091779	Gm21293	79	60.000	Mus_musculus
ENSFDAG00000001213	ALYREF	93	88.293	ENSMUSG00000025134	Alyref	80	85.784	Mus_musculus
ENSFDAG00000001213	ALYREF	83	69.444	ENSMUSG00000112931	Gm4303	51	70.861	Mus_musculus
ENSFDAG00000001213	ALYREF	70	82.667	MGP_PahariEiJ_G0018656	-	76	86.713	Mus_pahari
ENSFDAG00000001213	ALYREF	93	88.293	MGP_PahariEiJ_G0018655	-	80	85.784	Mus_pahari
ENSFDAG00000001213	ALYREF	75	73.885	MGP_PahariEiJ_G0027255	-	65	74.150	Mus_pahari
ENSFDAG00000001213	ALYREF	75	73.885	MGP_PahariEiJ_G0027254	-	67	74.150	Mus_pahari
ENSFDAG00000001213	ALYREF	79	57.727	MGP_SPRETEiJ_G0016590	-	54	76.230	Mus_spretus
ENSFDAG00000001213	ALYREF	93	88.293	MGP_SPRETEiJ_G0018373	Alyref	80	85.784	Mus_spretus
ENSFDAG00000001213	ALYREF	91	83.246	MGP_SPRETEiJ_G0015679	Alyref2	88	82.199	Mus_spretus
ENSFDAG00000001213	ALYREF	91	60.096	ENSMLUG00000024471	-	71	57.692	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	95	63.942	ENSMLUG00000030407	-	69	63.942	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	82	64.444	ENSMLUG00000028343	-	86	63.889	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	95	53.670	ENSMLUG00000023213	-	70	54.891	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	91	64.500	ENSMLUG00000002626	-	78	65.000	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	87	68.947	ENSMLUG00000027352	-	64	65.789	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	91	60.396	ENSMLUG00000022869	-	71	60.294	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	85	67.027	ENSMLUG00000024447	-	66	63.590	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	95	65.403	ENSMLUG00000025677	-	66	66.832	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	91	59.709	ENSMLUG00000015043	-	85	57.767	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	92	83.824	ENSMLUG00000009555	-	66	92.135	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	88	68.421	ENSMLUG00000024976	-	71	63.235	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	91	73.000	ENSMLUG00000027516	-	66	71.859	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	88	68.394	ENSMLUG00000026271	-	70	63.462	Myotis_lucifugus
ENSFDAG00000001213	ALYREF	95	85.782	ENSNLEG00000010313	ALYREF	78	87.864	Nomascus_leucogenys
ENSFDAG00000001213	ALYREF	61	93.893	ENSMEUG00000002210	ALYREF	59	94.776	Notamacropus_eugenii
ENSFDAG00000001213	ALYREF	61	92.366	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSFDAG00000001213	ALYREF	93	87.560	ENSODEG00000008359	ALYREF	80	88.995	Octodon_degus
ENSFDAG00000001213	ALYREF	90	69.856	ENSORLG00000012331	ALYREF	76	75.385	Oryzias_latipes
ENSFDAG00000001213	ALYREF	83	93.333	ENSOGAG00000012409	ALYREF	76	92.222	Otolemur_garnettii
ENSFDAG00000001213	ALYREF	81	97.143	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSFDAG00000001213	ALYREF	93	86.893	ENSPPRG00000010829	ALYREF	78	88.350	Panthera_pardus
ENSFDAG00000001213	ALYREF	67	97.241	ENSPTIG00000006399	ALYREF	81	97.241	Panthera_tigris_altaica
ENSFDAG00000001213	ALYREF	95	85.782	ENSPTRG00000009774	ALYREF	78	87.864	Pan_troglodytes
ENSFDAG00000001213	ALYREF	94	85.577	ENSPANG00000019265	ALYREF	81	86.047	Papio_anubis
ENSFDAG00000001213	ALYREF	62	90.299	ENSPSIG00000017541	ALYREF	99	91.045	Pelodiscus_sinensis
ENSFDAG00000001213	ALYREF	93	86.408	ENSPPYG00000008749	ALYREF	78	87.864	Pongo_abelii
ENSFDAG00000001213	ALYREF	81	96.023	ENSPCOG00000020874	ALYREF	78	84.466	Propithecus_coquereli
ENSFDAG00000001213	ALYREF	81	94.286	ENSPVAG00000017866	ALYREF	69	92.697	Pteropus_vampyrus
ENSFDAG00000001213	ALYREF	57	81.746	ENSRNOG00000036687	Alyref	65	85.484	Rattus_norvegicus
ENSFDAG00000001213	ALYREF	88	88.442	ENSRBIG00000039651	ALYREF	82	87.624	Rhinopithecus_bieti
ENSFDAG00000001213	ALYREF	100	80.519	ENSRROG00000045364	ALYREF	95	80.519	Rhinopithecus_roxellana
ENSFDAG00000001213	ALYREF	81	96.023	ENSSHAG00000010459	ALYREF	95	96.721	Sarcophilus_harrisii
ENSFDAG00000001213	ALYREF	82	58.673	ENSSDUG00000003992	-	91	48.548	Seriola_dumerili
ENSFDAG00000001213	ALYREF	81	59.896	ENSSLDG00000005386	-	91	49.580	Seriola_lalandi_dorsalis
ENSFDAG00000001213	ALYREF	92	84.236	ENSSPUG00000004600	ALYREF	78	84.236	Sphenodon_punctatus
ENSFDAG00000001213	ALYREF	91	70.561	ENSSPAG00000011178	ALYREF	89	64.032	Stegastes_partitus
ENSFDAG00000001213	ALYREF	93	88.293	ENSSSCG00000032655	ALYREF	83	86.854	Sus_scrofa
ENSFDAG00000001213	ALYREF	62	91.729	ENSTGUG00000003513	ALYREF	99	91.729	Taeniopygia_guttata
ENSFDAG00000001213	ALYREF	90	72.115	ENSTRUG00000008828	ALYREF	87	65.678	Takifugu_rubripes
ENSFDAG00000001213	ALYREF	81	95.429	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSFDAG00000001213	ALYREF	93	86.341	ENSTTRG00000012275	ALYREF	80	86.765	Tursiops_truncatus
ENSFDAG00000001213	ALYREF	82	84.181	ENSUAMG00000016931	ALYREF	68	80.220	Ursus_americanus
ENSFDAG00000001213	ALYREF	82	84.181	ENSUMAG00000016384	ALYREF	67	80.220	Ursus_maritimus
ENSFDAG00000001213	ALYREF	90	82.234	ENSXETG00000005391	alyref	76	86.592	Xenopus_tropicalis