EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000001308 (Gene tree)
Gene ID: 104860781
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 61233 bases
Position: chrKN122008.1:3448054-3509286
Accession: 104860781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000014209	SpoU_methylase	PF00588.19	5.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000002877	TARBP1-201	4735	XM_010622011	ENSFDAP00000014209	1275 (aa)	XP_010620313	-

Gene Model

Click here to download ENSFDAG00000001308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000001308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000001308	TARBP1	99	76.547	ENSG00000059588	TARBP1	79	76.623	Homo_sapiens
ENSFDAG00000001308	TARBP1	99	44.295	ENSAPOG00000016419	si:dkey-85a20.4	79	44.015	Acanthochromis_polyacanthus
ENSFDAG00000001308	TARBP1	99	76.412	ENSAMEG00000003359	TARBP1	94	76.183	Ailuropoda_melanoleuca
ENSFDAG00000001308	TARBP1	99	44.186	ENSATEG00000020266	si:dkey-85a20.4	79	44.328	Anabas_testudineus
ENSFDAG00000001308	TARBP1	99	63.053	ENSAPLG00000007666	TARBP1	98	62.901	Anas_platyrhynchos
ENSFDAG00000001308	TARBP1	98	58.755	ENSACAG00000001142	TARBP1	79	58.430	Anolis_carolinensis
ENSFDAG00000001308	TARBP1	98	75.039	ENSANAG00000022031	TARBP1	81	75.116	Aotus_nancymaae
ENSFDAG00000001308	TARBP1	99	75.595	ENSBTAG00000004517	TARBP1	79	75.672	Bos_taurus
ENSFDAG00000001308	TARBP1	99	75.477	ENSCJAG00000018155	TARBP1	79	75.554	Callithrix_jacchus
ENSFDAG00000001308	TARBP1	99	75.725	ENSCAFG00000011533	TARBP1	91	75.725	Canis_familiaris
ENSFDAG00000001308	TARBP1	99	75.783	ENSCAFG00020027141	TARBP1	79	75.783	Canis_lupus_dingo
ENSFDAG00000001308	TARBP1	99	74.713	ENSCHIG00000011437	TARBP1	79	74.866	Capra_hircus
ENSFDAG00000001308	TARBP1	99	75.769	ENSTSYG00000010382	TARBP1	95	75.459	Carlito_syrichta
ENSFDAG00000001308	TARBP1	99	73.692	ENSCAPG00000010831	TARBP1	100	73.692	Cavia_aperea
ENSFDAG00000001308	TARBP1	100	85.616	ENSCPOG00000013995	TARBP1	80	85.616	Cavia_porcellus
ENSFDAG00000001308	TARBP1	99	75.783	ENSCCAG00000037278	TARBP1	79	75.859	Cebus_capucinus
ENSFDAG00000001308	TARBP1	99	76.012	ENSCATG00000011754	TARBP1	79	75.936	Cercocebus_atys
ENSFDAG00000001308	TARBP1	100	86.151	ENSCLAG00000003655	TARBP1	95	86.151	Chinchilla_lanigera
ENSFDAG00000001308	TARBP1	99	76.165	ENSCSAG00000010100	TARBP1	99	76.089	Chlorocebus_sabaeus
ENSFDAG00000001308	TARBP1	82	79.167	ENSCPBG00000005587	TARBP1	76	79.167	Chrysemys_picta_bellii
ENSFDAG00000001308	TARBP1	99	76.089	ENSCANG00000034343	TARBP1	94	76.012	Colobus_angolensis_palliatus
ENSFDAG00000001308	TARBP1	99	76.132	ENSCGRG00001016690	Tarbp1	81	75.979	Cricetulus_griseus_chok1gshd
ENSFDAG00000001308	TARBP1	99	76.132	ENSCGRG00000016893	Tarbp1	87	75.979	Cricetulus_griseus_crigri
ENSFDAG00000001308	TARBP1	99	41.501	ENSCSEG00000005255	si:dkey-85a20.4	74	47.082	Cynoglossus_semilaevis
ENSFDAG00000001308	TARBP1	99	44.529	ENSDARG00000079055	si:dkey-85a20.4	99	51.821	Danio_rerio
ENSFDAG00000001308	TARBP1	99	75.076	ENSDNOG00000008637	TARBP1	78	75.000	Dasypus_novemcinctus
ENSFDAG00000001308	TARBP1	99	72.218	ENSDORG00000007984	Tarbp1	99	72.734	Dipodomys_ordii
ENSFDAG00000001308	TARBP1	99	76.794	ENSEASG00005000252	TARBP1	80	76.623	Equus_asinus_asinus
ENSFDAG00000001308	TARBP1	97	84.536	ENSECAG00000023673	TARBP1	78	84.536	Equus_caballus
ENSFDAG00000001308	TARBP1	99	43.797	ENSELUG00000012193	si:dkey-85a20.4	80	43.651	Esox_lucius
ENSFDAG00000001308	TARBP1	99	72.395	ENSFCAG00000014183	TARBP1	79	72.464	Felis_catus
ENSFDAG00000001308	TARBP1	99	63.377	ENSFALG00000013565	TARBP1	98	62.805	Ficedula_albicollis
ENSFDAG00000001308	TARBP1	99	37.007	ENSFHEG00000007565	si:dkey-85a20.4	69	50.649	Fundulus_heteroclitus
ENSFDAG00000001308	TARBP1	99	42.640	ENSGMOG00000004549	si:dkey-85a20.4	93	42.489	Gadus_morhua
ENSFDAG00000001308	TARBP1	99	59.542	ENSGALG00000011000	TARBP1	80	59.633	Gallus_gallus
ENSFDAG00000001308	TARBP1	99	43.567	ENSGAFG00000007387	si:dkey-85a20.4	79	43.341	Gambusia_affinis
ENSFDAG00000001308	TARBP1	99	44.186	ENSGACG00000005865	si:dkey-85a20.4	91	44.186	Gasterosteus_aculeatus
ENSFDAG00000001308	TARBP1	99	65.956	ENSGAGG00000012102	TARBP1	82	65.880	Gopherus_agassizii
ENSFDAG00000001308	TARBP1	99	73.800	ENSGGOG00000022879	TARBP1	93	74.390	Gorilla_gorilla
ENSFDAG00000001308	TARBP1	99	44.369	ENSHBUG00000008877	si:dkey-85a20.4	79	44.219	Haplochromis_burtoni
ENSFDAG00000001308	TARBP1	100	89.748	ENSHGLG00000011592	TARBP1	80	89.748	Heterocephalus_glaber_female
ENSFDAG00000001308	TARBP1	100	88.906	ENSHGLG00100015169	TARBP1	89	88.676	Heterocephalus_glaber_male
ENSFDAG00000001308	TARBP1	98	42.901	ENSIPUG00000005249	si:dkey-85a20.4	77	42.901	Ictalurus_punctatus
ENSFDAG00000001308	TARBP1	100	72.665	ENSSTOG00000032291	TARBP1	92	72.511	Ictidomys_tridecemlineatus
ENSFDAG00000001308	TARBP1	100	71.243	ENSJJAG00000017840	Tarbp1	89	71.320	Jaculus_jaculus
ENSFDAG00000001308	TARBP1	77	48.148	ENSKMAG00000017546	si:dkey-85a20.4	68	45.278	Kryptolebias_marmoratus
ENSFDAG00000001308	TARBP1	79	49.233	ENSLBEG00000012132	si:dkey-85a20.4	69	49.422	Labrus_bergylta
ENSFDAG00000001308	TARBP1	99	51.961	ENSLACG00000004337	TARBP1	79	51.961	Latimeria_chalumnae
ENSFDAG00000001308	TARBP1	99	48.779	ENSLOCG00000016214	si:dkey-85a20.4	79	48.626	Lepisosteus_oculatus
ENSFDAG00000001308	TARBP1	99	75.459	ENSLAFG00000011394	TARBP1	81	75.459	Loxodonta_africana
ENSFDAG00000001308	TARBP1	99	73.262	ENSMFAG00000041068	TARBP1	80	73.186	Macaca_fascicularis
ENSFDAG00000001308	TARBP1	99	73.262	ENSMMUG00000021703	TARBP1	79	73.186	Macaca_mulatta
ENSFDAG00000001308	TARBP1	99	76.089	ENSMNEG00000045002	TARBP1	79	76.012	Macaca_nemestrina
ENSFDAG00000001308	TARBP1	99	75.936	ENSMLEG00000044182	TARBP1	95	75.859	Mandrillus_leucophaeus
ENSFDAG00000001308	TARBP1	99	44.671	ENSMAMG00000021760	si:dkey-85a20.4	80	44.444	Mastacembelus_armatus
ENSFDAG00000001308	TARBP1	99	44.294	ENSMZEG00005005751	si:dkey-85a20.4	79	44.144	Maylandia_zebra
ENSFDAG00000001308	TARBP1	100	75.459	ENSMAUG00000020968	Tarbp1	81	75.306	Mesocricetus_auratus
ENSFDAG00000001308	TARBP1	91	78.155	ENSMICG00000015280	TARBP1	76	78.155	Microcebus_murinus
ENSFDAG00000001308	TARBP1	100	73.913	ENSMOCG00000004128	Tarbp1	81	73.837	Microtus_ochrogaster
ENSFDAG00000001308	TARBP1	99	42.944	ENSMMOG00000007795	si:dkey-85a20.4	79	43.128	Mola_mola
ENSFDAG00000001308	TARBP1	99	68.574	ENSMODG00000008504	TARBP1	78	68.497	Monodelphis_domestica
ENSFDAG00000001308	TARBP1	99	44.656	ENSMALG00000002916	si:dkey-85a20.4	79	44.817	Monopterus_albus
ENSFDAG00000001308	TARBP1	99	73.568	MGP_CAROLIEiJ_G0031729	Tarbp1	81	74.227	Mus_caroli
ENSFDAG00000001308	TARBP1	99	73.435	ENSMUSG00000090290	Tarbp1	81	73.282	Mus_musculus
ENSFDAG00000001308	TARBP1	99	73.857	MGP_PahariEiJ_G0023326	Tarbp1	81	73.704	Mus_pahari
ENSFDAG00000001308	TARBP1	99	73.644	MGP_SPRETEiJ_G0032846	Tarbp1	81	73.491	Mus_spretus
ENSFDAG00000001308	TARBP1	97	76.172	ENSMPUG00000002802	TARBP1	99	76.013	Mustela_putorius_furo
ENSFDAG00000001308	TARBP1	99	69.073	ENSMLUG00000002414	TARBP1	94	69.225	Myotis_lucifugus
ENSFDAG00000001308	TARBP1	99	76.547	ENSNLEG00000002518	TARBP1	79	76.623	Nomascus_leucogenys
ENSFDAG00000001308	TARBP1	81	81.327	ENSOPRG00000013822	TARBP1	63	81.327	Ochotona_princeps
ENSFDAG00000001308	TARBP1	100	84.239	ENSODEG00000005238	TARBP1	83	84.239	Octodon_degus
ENSFDAG00000001308	TARBP1	99	43.988	ENSONIG00000009789	si:dkey-85a20.4	92	43.913	Oreochromis_niloticus
ENSFDAG00000001308	TARBP1	99	77.429	ENSOCUG00000017418	TARBP1	79	77.582	Oryctolagus_cuniculus
ENSFDAG00000001308	TARBP1	99	42.113	ENSORLG00000010529	si:dkey-85a20.4	78	41.962	Oryzias_latipes
ENSFDAG00000001308	TARBP1	99	41.970	ENSORLG00020019264	si:dkey-85a20.4	78	41.970	Oryzias_latipes_hni
ENSFDAG00000001308	TARBP1	99	41.742	ENSORLG00015003276	si:dkey-85a20.4	78	41.894	Oryzias_latipes_hsok
ENSFDAG00000001308	TARBP1	99	73.644	ENSOGAG00000002379	TARBP1	79	73.491	Otolemur_garnettii
ENSFDAG00000001308	TARBP1	99	74.216	ENSOARG00000003434	TARBP1	85	74.198	Ovis_aries
ENSFDAG00000001308	TARBP1	99	76.700	ENSPPAG00000028097	TARBP1	94	76.776	Pan_paniscus
ENSFDAG00000001308	TARBP1	99	71.787	ENSPPRG00000013561	TARBP1	83	71.854	Panthera_pardus
ENSFDAG00000001308	TARBP1	99	74.791	ENSPTIG00000009281	TARBP1	95	74.866	Panthera_tigris_altaica
ENSFDAG00000001308	TARBP1	99	76.623	ENSPTRG00000002124	TARBP1	79	76.700	Pan_troglodytes
ENSFDAG00000001308	TARBP1	99	76.241	ENSPANG00000021933	TARBP1	79	76.165	Papio_anubis
ENSFDAG00000001308	TARBP1	99	45.830	ENSPKIG00000016716	si:dkey-85a20.4	78	45.830	Paramormyrops_kingsleyae
ENSFDAG00000001308	TARBP1	99	64.855	ENSPSIG00000010699	TARBP1	99	64.751	Pelodiscus_sinensis
ENSFDAG00000001308	TARBP1	99	75.019	ENSPEMG00000006888	Tarbp1	85	74.866	Peromyscus_maniculatus_bairdii
ENSFDAG00000001308	TARBP1	87	80.488	ENSPCIG00000029710	TARBP1	77	80.488	Phascolarctos_cinereus
ENSFDAG00000001308	TARBP1	99	43.072	ENSPFOG00000013020	si:dkey-85a20.4	92	42.846	Poecilia_formosa
ENSFDAG00000001308	TARBP1	99	43.351	ENSPLAG00000006044	si:dkey-85a20.4	79	43.125	Poecilia_latipinna
ENSFDAG00000001308	TARBP1	99	43.168	ENSPMEG00000017857	si:dkey-85a20.4	79	43.018	Poecilia_mexicana
ENSFDAG00000001308	TARBP1	99	43.727	ENSPREG00000022753	si:dkey-85a20.4	79	43.501	Poecilia_reticulata
ENSFDAG00000001308	TARBP1	88	93.548	ENSPPYG00000000102	TARBP1	77	93.548	Pongo_abelii
ENSFDAG00000001308	TARBP1	80	86.577	ENSPCAG00000004808	TARBP1	65	86.577	Procavia_capensis
ENSFDAG00000001308	TARBP1	99	72.956	ENSPCOG00000005666	TARBP1	79	73.186	Propithecus_coquereli
ENSFDAG00000001308	TARBP1	99	64.055	ENSPVAG00000014798	TARBP1	80	63.825	Pteropus_vampyrus
ENSFDAG00000001308	TARBP1	99	43.712	ENSPNYG00000019135	si:dkey-85a20.4	78	43.485	Pundamilia_nyererei
ENSFDAG00000001308	TARBP1	99	69.160	ENSRNOG00000053574	Tarbp1	81	69.008	Rattus_norvegicus
ENSFDAG00000001308	TARBP1	99	70.359	ENSRBIG00000043362	TARBP1	87	70.382	Rhinopithecus_bieti
ENSFDAG00000001308	TARBP1	99	75.783	ENSRROG00000029527	TARBP1	83	75.707	Rhinopithecus_roxellana
ENSFDAG00000001308	TARBP1	99	75.707	ENSSBOG00000034503	TARBP1	92	75.707	Saimiri_boliviensis_boliviensis
ENSFDAG00000001308	TARBP1	99	68.313	ENSSHAG00000000013	TARBP1	95	68.237	Sarcophilus_harrisii
ENSFDAG00000001308	TARBP1	99	44.686	ENSSFOG00015002660	si:dkey-85a20.4	95	44.694	Scleropages_formosus
ENSFDAG00000001308	TARBP1	99	44.978	ENSSMAG00000007081	si:dkey-85a20.4	77	44.903	Scophthalmus_maximus
ENSFDAG00000001308	TARBP1	99	43.215	ENSSDUG00000023566	si:dkey-85a20.4	79	43.215	Seriola_dumerili
ENSFDAG00000001308	TARBP1	99	44.670	ENSSLDG00000020200	si:dkey-85a20.4	79	44.520	Seriola_lalandi_dorsalis
ENSFDAG00000001308	TARBP1	94	72.113	ENSSARG00000012207	TARBP1	75	72.113	Sorex_araneus
ENSFDAG00000001308	TARBP1	99	60.136	ENSSPUG00000015364	TARBP1	79	62.137	Sphenodon_punctatus
ENSFDAG00000001308	TARBP1	99	44.294	ENSSPAG00000007213	si:dkey-85a20.4	79	44.063	Stegastes_partitus
ENSFDAG00000001308	TARBP1	95	93.204	ENSSSCG00000010160	TARBP1	78	93.204	Sus_scrofa
ENSFDAG00000001308	TARBP1	99	62.881	ENSTGUG00000010214	TARBP1	98	62.881	Taeniopygia_guttata
ENSFDAG00000001308	TARBP1	99	44.006	ENSTNIG00000016586	si:dkey-85a20.4	94	44.318	Tetraodon_nigroviridis
ENSFDAG00000001308	TARBP1	94	72.033	ENSTTRG00000008707	TARBP1	78	72.033	Tursiops_truncatus
ENSFDAG00000001308	TARBP1	99	75.802	ENSUMAG00000006730	TARBP1	96	75.610	Ursus_maritimus
ENSFDAG00000001308	TARBP1	75	82.000	ENSVPAG00000007665	TARBP1	68	82.000	Vicugna_pacos
ENSFDAG00000001308	TARBP1	99	76.012	ENSVVUG00000007460	TARBP1	95	76.786	Vulpes_vulpes
ENSFDAG00000001308	TARBP1	99	52.036	ENSXETG00000016224	tarbp1	94	52.036	Xenopus_tropicalis
ENSFDAG00000001308	TARBP1	99	41.398	ENSXCOG00000011779	si:dkey-85a20.4	86	46.509	Xiphophorus_couchianus
ENSFDAG00000001308	TARBP1	81	41.182	ENSXMAG00000009600	si:dkey-85a20.4	100	40.909	Xiphophorus_maculatus