EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000001422 (Gene tree)
Gene ID: 104861143
Gene Symbol: BMS1
Alias: BMS1L|KIAA0187
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 36119 bases
Position: chrKN122033.1:7692-43810
Accession: 104861143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000014281	AARP2CN	PF08142.12	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000003019	BMS1-201	5128	XM_010622456	ENSFDAP00000014281	1274 (aa)	XP_010620758	UPI00053F63B1

Gene Model

Click here to download ENSFDAG00000001422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000001422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000001422	BMS1	99	84.754	ENSG00000165733	BMS1	99	85.234	Homo_sapiens
ENSFDAG00000001422	BMS1	71	69.896	ENSAPOG00000002296	bms1	99	59.304	Acanthochromis_polyacanthus
ENSFDAG00000001422	BMS1	99	82.970	ENSAMEG00000016834	BMS1	99	83.826	Ailuropoda_melanoleuca
ENSFDAG00000001422	BMS1	77	79.019	ENSACIG00000002588	bms1	99	63.688	Amphilophus_citrinellus
ENSFDAG00000001422	BMS1	82	70.682	ENSAPEG00000014673	bms1	99	61.124	Amphiprion_percula
ENSFDAG00000001422	BMS1	88	68.218	ENSATEG00000023465	bms1	99	61.184	Anabas_testudineus
ENSFDAG00000001422	BMS1	96	70.655	ENSAPLG00000003759	BMS1	100	71.025	Anas_platyrhynchos
ENSFDAG00000001422	BMS1	99	68.356	ENSACAG00000004537	-	99	70.325	Anolis_carolinensis
ENSFDAG00000001422	BMS1	99	84.062	ENSANAG00000023432	BMS1	99	84.699	Aotus_nancymaae
ENSFDAG00000001422	BMS1	92	66.403	ENSACLG00000001294	bms1	99	66.111	Astatotilapia_calliptera
ENSFDAG00000001422	BMS1	83	72.018	ENSAMXG00000011236	bms1	99	60.415	Astyanax_mexicanus
ENSFDAG00000001422	BMS1	99	85.012	ENSBTAG00000012878	BMS1	99	85.070	Bos_taurus
ENSFDAG00000001422	BMS1	80	51.932	WBGene00022021	Y61A9LA.10	99	50.567	Caenorhabditis_elegans
ENSFDAG00000001422	BMS1	99	84.844	ENSCJAG00000021705	BMS1	99	85.168	Callithrix_jacchus
ENSFDAG00000001422	BMS1	99	84.711	ENSCAFG00000007114	BMS1	99	84.477	Canis_familiaris
ENSFDAG00000001422	BMS1	99	84.711	ENSCAFG00020025282	BMS1	99	84.477	Canis_lupus_dingo
ENSFDAG00000001422	BMS1	99	84.699	ENSCHIG00000023251	BMS1	99	84.681	Capra_hircus
ENSFDAG00000001422	BMS1	100	87.079	ENSCAPG00000008652	BMS1	100	86.922	Cavia_aperea
ENSFDAG00000001422	BMS1	100	91.073	ENSCPOG00000000502	BMS1	100	90.916	Cavia_porcellus
ENSFDAG00000001422	BMS1	99	70.226	ENSCCAG00000024969	-	99	70.460	Cebus_capucinus
ENSFDAG00000001422	BMS1	99	85.078	ENSCATG00000030625	-	99	85.246	Cercocebus_atys
ENSFDAG00000001422	BMS1	90	62.706	ENSCATG00000008695	-	97	63.194	Cercocebus_atys
ENSFDAG00000001422	BMS1	100	91.478	ENSCLAG00000002446	BMS1	100	90.930	Chinchilla_lanigera
ENSFDAG00000001422	BMS1	99	85.312	ENSCSAG00000011118	BMS1	99	85.480	Chlorocebus_sabaeus
ENSFDAG00000001422	BMS1	99	82.045	ENSCHOG00000011055	BMS1	99	82.605	Choloepus_hoffmanni
ENSFDAG00000001422	BMS1	99	71.836	ENSCPBG00000025581	BMS1	99	72.554	Chrysemys_picta_bellii
ENSFDAG00000001422	BMS1	79	58.838	ENSCING00000003181	-	98	58.838	Ciona_intestinalis
ENSFDAG00000001422	BMS1	68	55.181	ENSCSAVG00000004113	-	98	54.673	Ciona_savignyi
ENSFDAG00000001422	BMS1	99	85.379	ENSCANG00000011609	BMS1	99	85.625	Colobus_angolensis_palliatus
ENSFDAG00000001422	BMS1	100	82.568	ENSCGRG00001019461	Bms1	100	82.879	Cricetulus_griseus_chok1gshd
ENSFDAG00000001422	BMS1	100	82.568	ENSCGRG00000009016	Bms1	99	82.879	Cricetulus_griseus_crigri
ENSFDAG00000001422	BMS1	87	67.909	ENSCVAG00000008371	bms1	99	61.845	Cyprinodon_variegatus
ENSFDAG00000001422	BMS1	88	66.825	ENSDARG00000054154	bms1	98	63.603	Danio_rerio
ENSFDAG00000001422	BMS1	99	84.215	ENSDNOG00000015761	BMS1	99	84.292	Dasypus_novemcinctus
ENSFDAG00000001422	BMS1	100	83.919	ENSDORG00000002982	Bms1	99	84.465	Dipodomys_ordii
ENSFDAG00000001422	BMS1	79	58.824	FBgn0036686	CG7728	98	58.435	Drosophila_melanogaster
ENSFDAG00000001422	BMS1	85	79.464	ENSETEG00000009554	BMS1	91	79.464	Echinops_telfairi
ENSFDAG00000001422	BMS1	99	83.294	ENSEASG00005006894	BMS1	99	84.711	Equus_asinus_asinus
ENSFDAG00000001422	BMS1	99	84.309	ENSECAG00000001358	BMS1	99	84.711	Equus_caballus
ENSFDAG00000001422	BMS1	91	65.655	ENSELUG00000001756	bms1	99	60.016	Esox_lucius
ENSFDAG00000001422	BMS1	99	84.268	ENSFCAG00000011220	BMS1	99	84.813	Felis_catus
ENSFDAG00000001422	BMS1	99	68.793	ENSFALG00000006882	BMS1	99	69.588	Ficedula_albicollis
ENSFDAG00000001422	BMS1	85	67.532	ENSFHEG00000003367	bms1	99	60.157	Fundulus_heteroclitus
ENSFDAG00000001422	BMS1	87	65.534	ENSGMOG00000000718	bms1	96	65.534	Gadus_morhua
ENSFDAG00000001422	BMS1	99	70.223	ENSGALG00000002624	BMS1	99	70.575	Gallus_gallus
ENSFDAG00000001422	BMS1	89	65.974	ENSGACG00000015334	bms1	99	58.352	Gasterosteus_aculeatus
ENSFDAG00000001422	BMS1	99	71.641	ENSGAGG00000003467	BMS1	99	71.972	Gopherus_agassizii
ENSFDAG00000001422	BMS1	92	66.406	ENSHBUG00000022628	bms1	99	66.357	Haplochromis_burtoni
ENSFDAG00000001422	BMS1	100	92.241	ENSHGLG00000000477	BMS1	100	92.085	Heterocephalus_glaber_female
ENSFDAG00000001422	BMS1	100	92.320	ENSHGLG00100002176	BMS1	100	92.163	Heterocephalus_glaber_male
ENSFDAG00000001422	BMS1	89	66.558	ENSHCOG00000017604	bms1	99	60.218	Hippocampus_comes
ENSFDAG00000001422	BMS1	50	66.256	ENSIPUG00000017855	bms1	99	61.098	Ictalurus_punctatus
ENSFDAG00000001422	BMS1	100	84.711	ENSSTOG00000015063	BMS1	100	85.101	Ictidomys_tridecemlineatus
ENSFDAG00000001422	BMS1	100	82.904	ENSJJAG00000017328	Bms1	100	83.554	Jaculus_jaculus
ENSFDAG00000001422	BMS1	62	66.092	ENSKMAG00000021982	bms1	96	54.366	Kryptolebias_marmoratus
ENSFDAG00000001422	BMS1	82	70.387	ENSLBEG00000028208	bms1	99	60.401	Labrus_bergylta
ENSFDAG00000001422	BMS1	99	60.627	ENSLACG00000001600	BMS1	100	60.959	Latimeria_chalumnae
ENSFDAG00000001422	BMS1	50	66.615	ENSLOCG00000012914	bms1	99	62.364	Lepisosteus_oculatus
ENSFDAG00000001422	BMS1	99	81.585	ENSLAFG00000006250	BMS1	99	81.542	Loxodonta_africana
ENSFDAG00000001422	BMS1	81	87.524	ENSMFAG00000037771	BMS1	99	86.081	Macaca_fascicularis
ENSFDAG00000001422	BMS1	90	72.059	ENSMMUG00000007426	-	99	71.797	Macaca_mulatta
ENSFDAG00000001422	BMS1	85	66.728	ENSMLEG00000029084	-	97	67.126	Mandrillus_leucophaeus
ENSFDAG00000001422	BMS1	99	59.380	ENSMAMG00000020855	bms1	99	59.380	Mastacembelus_armatus
ENSFDAG00000001422	BMS1	92	66.012	ENSMZEG00005005663	bms1	99	65.926	Maylandia_zebra
ENSFDAG00000001422	BMS1	95	68.941	ENSMGAG00000001170	BMS1	99	70.290	Meleagris_gallopavo
ENSFDAG00000001422	BMS1	100	82.879	ENSMAUG00000002195	Bms1	100	82.879	Mesocricetus_auratus
ENSFDAG00000001422	BMS1	99	84.112	ENSMICG00000009977	BMS1	99	84.825	Microcebus_murinus
ENSFDAG00000001422	BMS1	100	81.542	ENSMOCG00000002038	Bms1	99	82.243	Microtus_ochrogaster
ENSFDAG00000001422	BMS1	86	66.882	ENSMMOG00000000977	bms1	97	66.882	Mola_mola
ENSFDAG00000001422	BMS1	100	75.345	ENSMODG00000001177	BMS1	99	76.282	Monodelphis_domestica
ENSFDAG00000001422	BMS1	93	64.006	ENSMALG00000009680	bms1	99	60.109	Monopterus_albus
ENSFDAG00000001422	BMS1	71	94.175	MGP_CAROLIEiJ_G0028785	-	86	94.175	Mus_caroli
ENSFDAG00000001422	BMS1	99	82.307	ENSMUSG00000030138	Bms1	99	83.268	Mus_musculus
ENSFDAG00000001422	BMS1	99	82.592	MGP_PahariEiJ_G0022539	Bms1	99	83.398	Mus_pahari
ENSFDAG00000001422	BMS1	99	82.059	MGP_SPRETEiJ_G0029816	Bms1	99	83.022	Mus_spretus
ENSFDAG00000001422	BMS1	99	83.828	ENSMPUG00000017276	BMS1	99	84.219	Mustela_putorius_furo
ENSFDAG00000001422	BMS1	99	83.385	ENSMLUG00000003260	BMS1	99	83.619	Myotis_lucifugus
ENSFDAG00000001422	BMS1	99	73.705	ENSNGAG00000015258	Bms1	99	74.176	Nannospalax_galili
ENSFDAG00000001422	BMS1	99	83.516	ENSNLEG00000015791	BMS1	99	83.906	Nomascus_leucogenys
ENSFDAG00000001422	BMS1	81	95.238	ENSOPRG00000005195	BMS1	81	95.238	Ochotona_princeps
ENSFDAG00000001422	BMS1	100	90.596	ENSODEG00000005554	BMS1	100	90.596	Octodon_degus
ENSFDAG00000001422	BMS1	95	65.688	ENSONIG00000007227	bms1	99	64.663	Oreochromis_niloticus
ENSFDAG00000001422	BMS1	99	75.117	ENSOANG00000000662	-	99	75.252	Ornithorhynchus_anatinus
ENSFDAG00000001422	BMS1	100	83.697	ENSOCUG00000005354	BMS1	99	84.567	Oryctolagus_cuniculus
ENSFDAG00000001422	BMS1	90	67.370	ENSORLG00000014655	bms1	99	61.280	Oryzias_latipes
ENSFDAG00000001422	BMS1	82	73.041	ENSORLG00020016246	bms1	99	61.351	Oryzias_latipes_hni
ENSFDAG00000001422	BMS1	88	67.427	ENSORLG00015014183	bms1	99	60.678	Oryzias_latipes_hsok
ENSFDAG00000001422	BMS1	82	73.380	ENSOMEG00000015042	bms1	99	61.454	Oryzias_melastigma
ENSFDAG00000001422	BMS1	99	84.370	ENSOGAG00000006511	BMS1	99	84.771	Otolemur_garnettii
ENSFDAG00000001422	BMS1	99	84.669	ENSOARG00000003900	BMS1	99	84.651	Ovis_aries
ENSFDAG00000001422	BMS1	99	81.094	ENSPPAG00000027837	BMS1	99	81.577	Pan_paniscus
ENSFDAG00000001422	BMS1	99	84.178	ENSPPRG00000001311	BMS1	99	84.723	Panthera_pardus
ENSFDAG00000001422	BMS1	99	82.449	ENSPTIG00000009652	BMS1	99	82.917	Panthera_tigris_altaica
ENSFDAG00000001422	BMS1	99	84.988	ENSPTRG00000002441	BMS1	99	85.469	Pan_troglodytes
ENSFDAG00000001422	BMS1	99	70.692	ENSPSIG00000006481	BMS1	99	71.243	Pelodiscus_sinensis
ENSFDAG00000001422	BMS1	100	75.800	ENSPEMG00000022467	Bms1	100	76.498	Peromyscus_maniculatus_bairdii
ENSFDAG00000001422	BMS1	90	85.674	ENSPCIG00000001339	BMS1	99	91.946	Phascolarctos_cinereus
ENSFDAG00000001422	BMS1	80	73.153	ENSPFOG00000015180	bms1	99	62.251	Poecilia_formosa
ENSFDAG00000001422	BMS1	80	73.399	ENSPMEG00000023176	bms1	94	63.818	Poecilia_mexicana
ENSFDAG00000001422	BMS1	85	66.667	ENSPREG00000002695	bms1	99	62.703	Poecilia_reticulata
ENSFDAG00000001422	BMS1	60	79.718	ENSPPYG00000002836	-	99	80.513	Pongo_abelii
ENSFDAG00000001422	BMS1	73	93.197	ENSPCAG00000014528	BMS1	73	93.197	Procavia_capensis
ENSFDAG00000001422	BMS1	95	80.308	ENSPCOG00000023834	-	99	81.296	Propithecus_coquereli
ENSFDAG00000001422	BMS1	99	82.104	ENSPVAG00000000725	BMS1	99	82.810	Pteropus_vampyrus
ENSFDAG00000001422	BMS1	87	68.233	ENSPNYG00000018866	bms1	99	62.217	Pundamilia_nyererei
ENSFDAG00000001422	BMS1	82	80.398	ENSRNOG00000006576	Bms1	100	80.989	Rattus_norvegicus
ENSFDAG00000001422	BMS1	99	83.503	ENSRROG00000040101	BMS1	99	83.906	Rhinopithecus_roxellana
ENSFDAG00000001422	BMS1	75	44.275	YPL217C	-	94	45.905	Saccharomyces_cerevisiae
ENSFDAG00000001422	BMS1	99	84.375	ENSSBOG00000035778	BMS1	99	85.480	Saimiri_boliviensis_boliviensis
ENSFDAG00000001422	BMS1	100	75.248	ENSSHAG00000005062	BMS1	99	75.381	Sarcophilus_harrisii
ENSFDAG00000001422	BMS1	89	67.042	ENSSMAG00000019966	bms1	99	60.673	Scophthalmus_maximus
ENSFDAG00000001422	BMS1	88	67.961	ENSSDUG00000016875	bms1	99	61.017	Seriola_dumerili
ENSFDAG00000001422	BMS1	70	71.955	ENSSARG00000014407	BMS1	100	72.402	Sorex_araneus
ENSFDAG00000001422	BMS1	100	69.880	ENSSPUG00000014454	BMS1	99	71.418	Sphenodon_punctatus
ENSFDAG00000001422	BMS1	99	84.531	ENSSSCG00000010198	BMS1	99	85.324	Sus_scrofa
ENSFDAG00000001422	BMS1	99	68.992	ENSTGUG00000006302	-	99	70.099	Taeniopygia_guttata
ENSFDAG00000001422	BMS1	86	63.826	ENSTRUG00000008028	bms1	99	62.715	Takifugu_rubripes
ENSFDAG00000001422	BMS1	99	58.320	ENSTNIG00000006216	bms1	99	57.672	Tetraodon_nigroviridis
ENSFDAG00000001422	BMS1	61	89.527	ENSTBEG00000001673	-	64	88.525	Tupaia_belangeri
ENSFDAG00000001422	BMS1	99	82.864	ENSTTRG00000007983	BMS1	99	82.551	Tursiops_truncatus
ENSFDAG00000001422	BMS1	99	83.594	ENSUAMG00000023996	BMS1	99	84.766	Ursus_americanus
ENSFDAG00000001422	BMS1	99	83.438	ENSUMAG00000016523	BMS1	99	84.609	Ursus_maritimus
ENSFDAG00000001422	BMS1	88	78.445	ENSVPAG00000007477	BMS1	99	79.347	Vicugna_pacos
ENSFDAG00000001422	BMS1	99	84.867	ENSVVUG00000021305	BMS1	99	84.633	Vulpes_vulpes
ENSFDAG00000001422	BMS1	85	67.086	ENSXCOG00000000506	bms1	95	75.369	Xiphophorus_couchianus
ENSFDAG00000001422	BMS1	85	67.227	ENSXMAG00000014236	bms1	99	62.455	Xiphophorus_maculatus