EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000001564 (Gene tree)
Gene ID: -
Gene Symbol: SNAPC2
Alias: PTFdelta|SNAP45
Full Name: small nuclear RNA activating complex polypeptide 2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1684 bases
Position: chrKN123867.1:622628-624311
Accession: 104849323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000014378	SnAPC_2_like	PF11035.8	4.8e-105	1	1
ENSFDAP00000014371	SnAPC_2_like	PF11035.8	8.3e-68	1	2
ENSFDAP00000014371	SnAPC_2_like	PF11035.8	8.3e-68	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000003202	SNAPC2-201	555	-	ENSFDAP00000014371	184 (aa)	-	-
ENSFDAT00000003214	SNAPC2-202	828	XM_010605717	ENSFDAP00000014378	275 (aa)	XP_010604019	-

Gene Model

Click here to download ENSFDAG00000001564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000001564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000001564	SNAPC2	100	67.148	ENSG00000104976	SNAPC2	100	61.856	Homo_sapiens
ENSFDAG00000001564	SNAPC2	98	65.625	ENSAMEG00000008622	SNAPC2	80	62.007	Ailuropoda_melanoleuca
ENSFDAG00000001564	SNAPC2	67	31.250	ENSAOCG00000012420	-	53	31.250	Amphiprion_ocellaris
ENSFDAG00000001564	SNAPC2	87	31.873	ENSAOCG00000013265	-	69	31.984	Amphiprion_ocellaris
ENSFDAG00000001564	SNAPC2	75	36.905	ENSAPEG00000010950	-	68	30.769	Amphiprion_percula
ENSFDAG00000001564	SNAPC2	98	39.145	ENSACAG00000026540	-	80	39.145	Anolis_carolinensis
ENSFDAG00000001564	SNAPC2	100	65.827	ENSANAG00000029939	SNAPC2	82	64.643	Aotus_nancymaae
ENSFDAG00000001564	SNAPC2	95	34.641	ENSACLG00000013092	-	76	30.935	Astatotilapia_calliptera
ENSFDAG00000001564	SNAPC2	90	42.500	ENSAMXG00000038205	snapc2	55	42.500	Astyanax_mexicanus
ENSFDAG00000001564	SNAPC2	97	63.406	ENSBTAG00000014926	SNAPC2	81	62.500	Bos_taurus
ENSFDAG00000001564	SNAPC2	100	66.418	ENSCJAG00000006117	SNAPC2	82	65.233	Callithrix_jacchus
ENSFDAG00000001564	SNAPC2	100	62.143	ENSCAFG00000031676	SNAPC2	81	61.702	Canis_familiaris
ENSFDAG00000001564	SNAPC2	100	62.143	ENSCAFG00020022851	SNAPC2	81	61.702	Canis_lupus_dingo
ENSFDAG00000001564	SNAPC2	85	69.658	ENSTSYG00000037088	SNAPC2	79	69.658	Carlito_syrichta
ENSFDAG00000001564	SNAPC2	71	77.372	ENSCAPG00000013921	-	99	77.372	Cavia_aperea
ENSFDAG00000001564	SNAPC2	100	76.429	ENSCPOG00000034229	SNAPC2	84	65.152	Cavia_porcellus
ENSFDAG00000001564	SNAPC2	100	67.910	ENSCCAG00000034172	SNAPC2	82	66.547	Cebus_capucinus
ENSFDAG00000001564	SNAPC2	100	67.857	ENSCATG00000037131	SNAPC2	93	66.187	Cercocebus_atys
ENSFDAG00000001564	SNAPC2	100	75.510	ENSCLAG00000006885	SNAPC2	83	67.638	Chinchilla_lanigera
ENSFDAG00000001564	SNAPC2	100	66.784	ENSCSAG00000008167	SNAPC2	82	67.143	Chlorocebus_sabaeus
ENSFDAG00000001564	SNAPC2	84	50.000	ENSCPBG00000002277	SNAPC2	58	49.580	Chrysemys_picta_bellii
ENSFDAG00000001564	SNAPC2	100	67.857	ENSCANG00000040525	SNAPC2	82	67.857	Colobus_angolensis_palliatus
ENSFDAG00000001564	SNAPC2	100	67.586	ENSCGRG00001006223	Snapc2	83	61.565	Cricetulus_griseus_chok1gshd
ENSFDAG00000001564	SNAPC2	100	67.586	ENSCGRG00000005622	Snapc2	98	61.565	Cricetulus_griseus_crigri
ENSFDAG00000001564	SNAPC2	73	32.114	ENSCVAG00000011360	-	76	31.707	Cyprinodon_variegatus
ENSFDAG00000001564	SNAPC2	76	40.000	ENSDARG00000036473	snapc2	50	38.931	Danio_rerio
ENSFDAG00000001564	SNAPC2	99	63.309	ENSDNOG00000036458	SNAPC2	79	62.950	Dasypus_novemcinctus
ENSFDAG00000001564	SNAPC2	99	65.125	ENSDORG00000009155	Snapc2	80	64.413	Dipodomys_ordii
ENSFDAG00000001564	SNAPC2	98	65.942	ENSETEG00000012986	SNAPC2	80	61.511	Echinops_telfairi
ENSFDAG00000001564	SNAPC2	100	66.323	ENSEASG00005003809	SNAPC2	83	66.323	Equus_asinus_asinus
ENSFDAG00000001564	SNAPC2	100	67.958	ENSECAG00000011011	SNAPC2	82	67.254	Equus_caballus
ENSFDAG00000001564	SNAPC2	97	32.394	ENSELUG00000010380	-	90	32.394	Esox_lucius
ENSFDAG00000001564	SNAPC2	100	66.548	ENSFCAG00000014945	SNAPC2	82	65.836	Felis_catus
ENSFDAG00000001564	SNAPC2	67	36.111	ENSGACG00000000727	-	98	36.111	Gasterosteus_aculeatus
ENSFDAG00000001564	SNAPC2	96	49.180	ENSGAGG00000015845	SNAPC2	82	41.441	Gopherus_agassizii
ENSFDAG00000001564	SNAPC2	100	67.188	ENSGGOG00000022392	SNAPC2	82	65.714	Gorilla_gorilla
ENSFDAG00000001564	SNAPC2	100	83.333	ENSHGLG00000011707	SNAPC2	99	75.000	Heterocephalus_glaber_female
ENSFDAG00000001564	SNAPC2	100	83.333	ENSHGLG00100003422	SNAPC2	85	73.418	Heterocephalus_glaber_male
ENSFDAG00000001564	SNAPC2	99	34.155	ENSHCOG00000002795	-	78	33.449	Hippocampus_comes
ENSFDAG00000001564	SNAPC2	76	35.714	ENSIPUG00000004844	Snapc2	55	36.364	Ictalurus_punctatus
ENSFDAG00000001564	SNAPC2	100	64.413	ENSSTOG00000009102	SNAPC2	81	64.057	Ictidomys_tridecemlineatus
ENSFDAG00000001564	SNAPC2	100	64.894	ENSJJAG00000003060	Snapc2	75	65.278	Jaculus_jaculus
ENSFDAG00000001564	SNAPC2	70	32.308	ENSLBEG00000009986	-	76	30.233	Labrus_bergylta
ENSFDAG00000001564	SNAPC2	100	39.223	ENSLOCG00000014065	snapc2	80	39.792	Lepisosteus_oculatus
ENSFDAG00000001564	SNAPC2	100	65.217	ENSLAFG00000023323	SNAPC2	81	64.057	Loxodonta_africana
ENSFDAG00000001564	SNAPC2	100	67.143	ENSMFAG00000034273	SNAPC2	82	66.071	Macaca_fascicularis
ENSFDAG00000001564	SNAPC2	100	67.857	ENSMMUG00000006540	SNAPC2	100	66.429	Macaca_mulatta
ENSFDAG00000001564	SNAPC2	100	67.857	ENSMNEG00000039547	SNAPC2	93	66.071	Macaca_nemestrina
ENSFDAG00000001564	SNAPC2	100	67.857	ENSMLEG00000031059	SNAPC2	82	66.429	Mandrillus_leucophaeus
ENSFDAG00000001564	SNAPC2	95	34.641	ENSMZEG00005009488	-	76	30.935	Maylandia_zebra
ENSFDAG00000001564	SNAPC2	97	68.132	ENSMAUG00000015015	Snapc2	73	68.841	Mesocricetus_auratus
ENSFDAG00000001564	SNAPC2	100	68.182	ENSMICG00000035695	SNAPC2	83	67.114	Microcebus_murinus
ENSFDAG00000001564	SNAPC2	100	65.517	ENSMOCG00000019080	Snapc2	83	62.034	Microtus_ochrogaster
ENSFDAG00000001564	SNAPC2	98	51.562	ENSMODG00000005069	-	80	45.890	Monodelphis_domestica
ENSFDAG00000001564	SNAPC2	98	31.399	ENSMALG00000002335	-	79	30.717	Monopterus_albus
ENSFDAG00000001564	SNAPC2	100	65.278	MGP_CAROLIEiJ_G0030795	Snapc2	83	60.067	Mus_caroli
ENSFDAG00000001564	SNAPC2	100	63.889	ENSMUSG00000011837	Snapc2	94	60.577	Mus_musculus
ENSFDAG00000001564	SNAPC2	100	62.500	MGP_SPRETEiJ_G0031903	Snapc2	83	57.383	Mus_spretus
ENSFDAG00000001564	SNAPC2	100	62.500	ENSMPUG00000008010	SNAPC2	82	61.034	Mustela_putorius_furo
ENSFDAG00000001564	SNAPC2	100	65.000	ENSMLUG00000013689	-	81	60.498	Myotis_lucifugus
ENSFDAG00000001564	SNAPC2	83	56.769	ENSMLUG00000013735	-	73	54.772	Myotis_lucifugus
ENSFDAG00000001564	SNAPC2	77	55.814	ENSMLUG00000001710	-	60	55.814	Myotis_lucifugus
ENSFDAG00000001564	SNAPC2	85	54.237	ENSMLUG00000006427	-	70	54.741	Myotis_lucifugus
ENSFDAG00000001564	SNAPC2	84	55.652	ENSMLUG00000002738	-	74	55.652	Myotis_lucifugus
ENSFDAG00000001564	SNAPC2	100	64.643	ENSNGAG00000014201	Snapc2	92	64.643	Nannospalax_galili
ENSFDAG00000001564	SNAPC2	98	30.935	ENSNBRG00000003764	-	76	30.935	Neolamprologus_brichardi
ENSFDAG00000001564	SNAPC2	100	67.143	ENSNLEG00000001250	SNAPC2	82	66.787	Nomascus_leucogenys
ENSFDAG00000001564	SNAPC2	97	50.000	ENSMEUG00000014367	SNAPC2	79	46.886	Notamacropus_eugenii
ENSFDAG00000001564	SNAPC2	99	70.134	ENSODEG00000011415	SNAPC2	89	70.792	Octodon_degus
ENSFDAG00000001564	SNAPC2	76	32.273	ENSONIG00000002078	-	75	33.180	Oreochromis_niloticus
ENSFDAG00000001564	SNAPC2	100	59.233	ENSOCUG00000027536	SNAPC2	63	58.681	Oryctolagus_cuniculus
ENSFDAG00000001564	SNAPC2	88	33.230	ENSORLG00000010375	-	63	31.677	Oryzias_latipes
ENSFDAG00000001564	SNAPC2	90	33.702	ENSORLG00020015071	-	79	31.962	Oryzias_latipes_hni
ENSFDAG00000001564	SNAPC2	73	34.247	ENSOMEG00000003040	snapc2	80	31.065	Oryzias_melastigma
ENSFDAG00000001564	SNAPC2	98	63.603	ENSOGAG00000012870	SNAPC2	79	63.235	Otolemur_garnettii
ENSFDAG00000001564	SNAPC2	99	63.251	ENSOARG00000003045	SNAPC2	98	63.251	Ovis_aries
ENSFDAG00000001564	SNAPC2	96	70.732	ENSPPAG00000032460	SNAPC2	82	62.105	Pan_paniscus
ENSFDAG00000001564	SNAPC2	100	66.787	ENSPPRG00000003265	SNAPC2	82	66.065	Panthera_pardus
ENSFDAG00000001564	SNAPC2	100	65.625	ENSPTIG00000016014	SNAPC2	86	61.818	Panthera_tigris_altaica
ENSFDAG00000001564	SNAPC2	100	67.148	ENSPTRG00000042034	SNAPC2	82	66.187	Pan_troglodytes
ENSFDAG00000001564	SNAPC2	100	67.857	ENSPANG00000025882	SNAPC2	82	66.786	Papio_anubis
ENSFDAG00000001564	SNAPC2	88	52.459	ENSPSIG00000016099	SNAPC2	80	44.251	Pelodiscus_sinensis
ENSFDAG00000001564	SNAPC2	100	66.207	ENSPEMG00000009767	Snapc2	83	60.473	Peromyscus_maniculatus_bairdii
ENSFDAG00000001564	SNAPC2	97	45.876	ENSPCIG00000024986	-	77	45.876	Phascolarctos_cinereus
ENSFDAG00000001564	SNAPC2	81	42.857	ENSPFOG00000012045	-	72	35.628	Poecilia_formosa
ENSFDAG00000001564	SNAPC2	81	42.857	ENSPLAG00000018873	-	70	31.154	Poecilia_latipinna
ENSFDAG00000001564	SNAPC2	81	42.857	ENSPMEG00000002270	-	70	31.154	Poecilia_mexicana
ENSFDAG00000001564	SNAPC2	100	67.626	ENSPPYG00000009494	SNAPC2	82	66.429	Pongo_abelii
ENSFDAG00000001564	SNAPC2	100	70.463	ENSPCOG00000026672	SNAPC2	82	69.366	Propithecus_coquereli
ENSFDAG00000001564	SNAPC2	72	74.074	ENSPVAG00000002296	SNAPC2	58	74.074	Pteropus_vampyrus
ENSFDAG00000001564	SNAPC2	76	41.463	ENSPNAG00000020947	snapc2	52	41.463	Pygocentrus_nattereri
ENSFDAG00000001564	SNAPC2	100	61.111	ENSRNOG00000001056	Snapc2	83	57.718	Rattus_norvegicus
ENSFDAG00000001564	SNAPC2	100	68.613	ENSRBIG00000044314	SNAPC2	82	67.143	Rhinopithecus_bieti
ENSFDAG00000001564	SNAPC2	100	68.613	ENSRROG00000043480	SNAPC2	84	67.143	Rhinopithecus_roxellana
ENSFDAG00000001564	SNAPC2	100	68.657	ENSSBOG00000011587	SNAPC2	98	65.714	Saimiri_boliviensis_boliviensis
ENSFDAG00000001564	SNAPC2	98	50.000	ENSSHAG00000009002	-	81	46.918	Sarcophilus_harrisii
ENSFDAG00000001564	SNAPC2	86	31.405	ENSSMAG00000009095	-	66	31.405	Scophthalmus_maximus
ENSFDAG00000001564	SNAPC2	84	33.730	ENSSDUG00000016949	-	69	32.422	Seriola_dumerili
ENSFDAG00000001564	SNAPC2	100	59.859	ENSSARG00000012954	SNAPC2	81	58.511	Sorex_araneus
ENSFDAG00000001564	SNAPC2	100	65.125	ENSSSCG00000013589	SNAPC2	82	64.769	Sus_scrofa
ENSFDAG00000001564	SNAPC2	97	30.667	ENSTRUG00000005122	-	100	30.000	Takifugu_rubripes
ENSFDAG00000001564	SNAPC2	100	65.125	ENSTTRG00000010165	SNAPC2	82	64.413	Tursiops_truncatus
ENSFDAG00000001564	SNAPC2	100	64.062	ENSUAMG00000021489	SNAPC2	81	63.082	Ursus_americanus
ENSFDAG00000001564	SNAPC2	100	64.062	ENSUMAG00000014809	SNAPC2	82	62.366	Ursus_maritimus
ENSFDAG00000001564	SNAPC2	100	62.143	ENSVVUG00000026998	SNAPC2	81	61.702	Vulpes_vulpes