EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000001572 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 6097 bases
Position: chrKN120636.1:6585349-6591445
Accession: 104862970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000014377	R3H	PF01424.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000003210	R3HCC1-201	1359	XM_010625208	ENSFDAP00000014377	452 (aa)	XP_010623510	-

Gene Model

Click here to download ENSFDAG00000001572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000001572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000001572	R3HCC1	99	70.236	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSFDAG00000001572	R3HCC1	61	45.455	ENSAPOG00000003616	r3hcc1	63	45.455	Acanthochromis_polyacanthus
ENSFDAG00000001572	R3HCC1	98	66.885	ENSAMEG00000002963	R3HCC1	90	66.885	Ailuropoda_melanoleuca
ENSFDAG00000001572	R3HCC1	97	32.898	ENSACIG00000017144	r3hcc1	84	41.007	Amphilophus_citrinellus
ENSFDAG00000001572	R3HCC1	59	46.154	ENSAOCG00000003945	r3hcc1	66	46.154	Amphiprion_ocellaris
ENSFDAG00000001572	R3HCC1	59	46.154	ENSAPEG00000003613	r3hcc1	66	46.154	Amphiprion_percula
ENSFDAG00000001572	R3HCC1	56	42.446	ENSATEG00000023860	r3hcc1	66	42.282	Anabas_testudineus
ENSFDAG00000001572	R3HCC1	97	42.857	ENSACAG00000016627	R3HCC1	96	44.444	Anolis_carolinensis
ENSFDAG00000001572	R3HCC1	99	69.593	ENSANAG00000036169	R3HCC1	95	70.450	Aotus_nancymaae
ENSFDAG00000001572	R3HCC1	98	64.847	ENSBTAG00000025830	R3HCC1	95	64.847	Bos_taurus
ENSFDAG00000001572	R3HCC1	99	67.880	ENSCJAG00000020118	R3HCC1	99	62.338	Callithrix_jacchus
ENSFDAG00000001572	R3HCC1	98	64.410	ENSCAFG00000009210	R3HCC1	95	64.642	Canis_familiaris
ENSFDAG00000001572	R3HCC1	84	60.606	ENSCAFG00020012870	R3HCC1	86	61.578	Canis_lupus_dingo
ENSFDAG00000001572	R3HCC1	98	64.912	ENSCHIG00000009107	R3HCC1	98	64.912	Capra_hircus
ENSFDAG00000001572	R3HCC1	99	71.030	ENSTSYG00000000511	R3HCC1	77	71.030	Carlito_syrichta
ENSFDAG00000001572	R3HCC1	90	69.053	ENSCAPG00000015813	R3HCC1	100	69.053	Cavia_aperea
ENSFDAG00000001572	R3HCC1	99	75.527	ENSCPOG00000009696	R3HCC1	100	75.527	Cavia_porcellus
ENSFDAG00000001572	R3HCC1	99	69.165	ENSCCAG00000037811	R3HCC1	99	63.636	Cebus_capucinus
ENSFDAG00000001572	R3HCC1	99	68.670	ENSCATG00000032971	R3HCC1	99	63.636	Cercocebus_atys
ENSFDAG00000001572	R3HCC1	99	75.435	ENSCLAG00000015556	R3HCC1	84	75.435	Chinchilla_lanigera
ENSFDAG00000001572	R3HCC1	99	68.884	ENSCSAG00000016250	R3HCC1	91	70.172	Chlorocebus_sabaeus
ENSFDAG00000001572	R3HCC1	100	64.043	ENSCHOG00000000396	R3HCC1	96	64.392	Choloepus_hoffmanni
ENSFDAG00000001572	R3HCC1	99	70.236	ENSCANG00000029441	R3HCC1	99	64.286	Colobus_angolensis_palliatus
ENSFDAG00000001572	R3HCC1	99	60.870	ENSCGRG00001014977	R3hcc1	99	63.485	Cricetulus_griseus_chok1gshd
ENSFDAG00000001572	R3HCC1	99	60.870	ENSCGRG00000004454	R3hcc1	99	63.485	Cricetulus_griseus_crigri
ENSFDAG00000001572	R3HCC1	96	33.186	ENSCSEG00000005748	r3hcc1	98	33.186	Cynoglossus_semilaevis
ENSFDAG00000001572	R3HCC1	82	31.510	ENSCVAG00000002640	r3hcc1	95	31.169	Cyprinodon_variegatus
ENSFDAG00000001572	R3HCC1	97	32.877	ENSDARG00000099593	r3hcc1	73	44.056	Danio_rerio
ENSFDAG00000001572	R3HCC1	99	66.452	ENSDNOG00000007168	R3HCC1	92	66.452	Dasypus_novemcinctus
ENSFDAG00000001572	R3HCC1	99	58.621	ENSETEG00000001147	R3HCC1	97	58.621	Echinops_telfairi
ENSFDAG00000001572	R3HCC1	98	67.679	ENSEASG00005018782	R3HCC1	79	67.679	Equus_asinus_asinus
ENSFDAG00000001572	R3HCC1	98	67.679	ENSECAG00000025013	R3HCC1	96	67.679	Equus_caballus
ENSFDAG00000001572	R3HCC1	98	62.500	ENSEEUG00000011918	R3HCC1	95	62.500	Erinaceus_europaeus
ENSFDAG00000001572	R3HCC1	93	33.641	ENSELUG00000023650	r3hcc1	72	49.474	Esox_lucius
ENSFDAG00000001572	R3HCC1	99	66.883	ENSFCAG00000012395	R3HCC1	96	67.532	Felis_catus
ENSFDAG00000001572	R3HCC1	60	38.406	ENSGMOG00000017590	-	80	38.406	Gadus_morhua
ENSFDAG00000001572	R3HCC1	97	34.305	ENSGAFG00000008747	-	63	46.809	Gambusia_affinis
ENSFDAG00000001572	R3HCC1	99	70.194	ENSGGOG00000013817	R3HCC1	99	70.194	Gorilla_gorilla
ENSFDAG00000001572	R3HCC1	61	50.602	ENSHBUG00000022250	-	69	50.602	Haplochromis_burtoni
ENSFDAG00000001572	R3HCC1	100	81.425	ENSHGLG00000010517	R3HCC1	92	81.425	Heterocephalus_glaber_female
ENSFDAG00000001572	R3HCC1	100	81.425	ENSHGLG00100006388	R3HCC1	92	81.425	Heterocephalus_glaber_male
ENSFDAG00000001572	R3HCC1	60	46.970	ENSHCOG00000011745	r3hcc1	68	45.390	Hippocampus_comes
ENSFDAG00000001572	R3HCC1	97	34.467	ENSIPUG00000024504	r3hcc1	87	35.426	Ictalurus_punctatus
ENSFDAG00000001572	R3HCC1	99	62.821	ENSSTOG00000027130	R3HCC1	95	62.821	Ictidomys_tridecemlineatus
ENSFDAG00000001572	R3HCC1	99	63.425	ENSJJAG00000013075	R3hcc1	99	64.557	Jaculus_jaculus
ENSFDAG00000001572	R3HCC1	97	36.585	ENSLOCG00000015442	r3hcc1	81	50.000	Lepisosteus_oculatus
ENSFDAG00000001572	R3HCC1	99	65.560	ENSLAFG00000016137	R3HCC1	95	66.598	Loxodonta_africana
ENSFDAG00000001572	R3HCC1	99	68.455	ENSMFAG00000032894	R3HCC1	99	63.420	Macaca_fascicularis
ENSFDAG00000001572	R3HCC1	99	68.670	ENSMMUG00000016655	R3HCC1	99	63.636	Macaca_mulatta
ENSFDAG00000001572	R3HCC1	99	69.099	ENSMNEG00000043283	R3HCC1	99	63.420	Macaca_nemestrina
ENSFDAG00000001572	R3HCC1	99	69.099	ENSMLEG00000030147	R3HCC1	99	64.069	Mandrillus_leucophaeus
ENSFDAG00000001572	R3HCC1	59	43.137	ENSMAMG00000018146	r3hcc1	68	43.137	Mastacembelus_armatus
ENSFDAG00000001572	R3HCC1	98	42.325	ENSMGAG00000001356	R3HCC1	90	41.319	Meleagris_gallopavo
ENSFDAG00000001572	R3HCC1	99	65.393	ENSMAUG00000016096	R3hcc1	99	65.817	Mesocricetus_auratus
ENSFDAG00000001572	R3HCC1	98	70.870	ENSMICG00000011146	R3HCC1	92	70.652	Microcebus_murinus
ENSFDAG00000001572	R3HCC1	98	44.776	ENSMODG00000016809	-	99	45.203	Monodelphis_domestica
ENSFDAG00000001572	R3HCC1	57	43.750	ENSMALG00000000731	r3hcc1	64	43.750	Monopterus_albus
ENSFDAG00000001572	R3HCC1	100	62.348	MGP_CAROLIEiJ_G0019467	R3hcc1	100	62.653	Mus_caroli
ENSFDAG00000001572	R3HCC1	100	62.753	ENSMUSG00000034194	R3hcc1	100	62.449	Mus_musculus
ENSFDAG00000001572	R3HCC1	100	61.000	MGP_PahariEiJ_G0030484	R3hcc1	100	61.400	Mus_pahari
ENSFDAG00000001572	R3HCC1	98	66.013	ENSMPUG00000003457	R3HCC1	86	66.013	Mustela_putorius_furo
ENSFDAG00000001572	R3HCC1	98	63.239	ENSMLUG00000000266	R3HCC1	91	64.859	Myotis_lucifugus
ENSFDAG00000001572	R3HCC1	99	69.114	ENSNGAG00000016747	R3hcc1	99	68.008	Nannospalax_galili
ENSFDAG00000001572	R3HCC1	90	68.868	ENSNLEG00000015944	R3HCC1	85	68.632	Nomascus_leucogenys
ENSFDAG00000001572	R3HCC1	99	54.230	ENSMEUG00000010587	R3HCC1	97	53.680	Notamacropus_eugenii
ENSFDAG00000001572	R3HCC1	99	62.338	ENSOPRG00000013390	R3HCC1	95	62.554	Ochotona_princeps
ENSFDAG00000001572	R3HCC1	98	69.057	ENSODEG00000007529	R3HCC1	100	69.215	Octodon_degus
ENSFDAG00000001572	R3HCC1	98	65.435	ENSOCUG00000023554	R3HCC1	84	65.652	Oryctolagus_cuniculus
ENSFDAG00000001572	R3HCC1	93	31.925	ENSORLG00000016816	r3hcc1	92	41.758	Oryzias_latipes
ENSFDAG00000001572	R3HCC1	93	32.787	ENSORLG00020012005	r3hcc1	94	40.741	Oryzias_latipes_hni
ENSFDAG00000001572	R3HCC1	63	44.654	ENSORLG00015007018	r3hcc1	74	44.654	Oryzias_latipes_hsok
ENSFDAG00000001572	R3HCC1	93	32.243	ENSOMEG00000000816	r3hcc1	82	43.243	Oryzias_melastigma
ENSFDAG00000001572	R3HCC1	98	67.320	ENSOGAG00000001291	R3HCC1	91	67.320	Otolemur_garnettii
ENSFDAG00000001572	R3HCC1	98	63.774	ENSOARG00000010146	R3HCC1	95	63.774	Ovis_aries
ENSFDAG00000001572	R3HCC1	99	69.593	ENSPPAG00000033165	R3HCC1	99	69.379	Pan_paniscus
ENSFDAG00000001572	R3HCC1	99	67.174	ENSPPRG00000002522	R3HCC1	99	67.826	Panthera_pardus
ENSFDAG00000001572	R3HCC1	91	64.706	ENSPTIG00000011230	R3HCC1	95	65.094	Panthera_tigris_altaica
ENSFDAG00000001572	R3HCC1	99	70.236	ENSPTRG00000020076	R3HCC1	99	65.368	Pan_troglodytes
ENSFDAG00000001572	R3HCC1	99	68.670	ENSPANG00000000453	R3HCC1	99	63.853	Papio_anubis
ENSFDAG00000001572	R3HCC1	90	35.476	ENSPKIG00000020397	-	95	35.499	Paramormyrops_kingsleyae
ENSFDAG00000001572	R3HCC1	90	34.975	ENSPKIG00000014426	-	88	48.592	Paramormyrops_kingsleyae
ENSFDAG00000001572	R3HCC1	99	43.396	ENSPSIG00000017664	R3HCC1	98	43.396	Pelodiscus_sinensis
ENSFDAG00000001572	R3HCC1	51	53.608	ENSPMGG00000007792	r3hcc1	99	32.444	Periophthalmus_magnuspinnatus
ENSFDAG00000001572	R3HCC1	100	66.186	ENSPEMG00000007118	R3hcc1	100	65.773	Peromyscus_maniculatus_bairdii
ENSFDAG00000001572	R3HCC1	90	46.404	ENSPCIG00000022718	-	83	46.882	Phascolarctos_cinereus
ENSFDAG00000001572	R3HCC1	92	67.898	ENSPPYG00000018436	R3HCC1	99	67.667	Pongo_abelii
ENSFDAG00000001572	R3HCC1	72	78.065	ENSPCAG00000012229	R3HCC1	72	78.065	Procavia_capensis
ENSFDAG00000001572	R3HCC1	98	69.518	ENSPCOG00000027554	R3HCC1	98	69.565	Propithecus_coquereli
ENSFDAG00000001572	R3HCC1	98	66.885	ENSPVAG00000009829	R3HCC1	94	66.885	Pteropus_vampyrus
ENSFDAG00000001572	R3HCC1	60	45.865	ENSPNAG00000023875	r3hcc1	85	45.865	Pygocentrus_nattereri
ENSFDAG00000001572	R3HCC1	100	64.082	ENSRNOG00000016777	AABR07018321.1	82	64.694	Rattus_norvegicus
ENSFDAG00000001572	R3HCC1	99	69.807	ENSRBIG00000028045	R3HCC1	99	70.236	Rhinopithecus_bieti
ENSFDAG00000001572	R3HCC1	99	69.807	ENSRROG00000031126	R3HCC1	99	64.502	Rhinopithecus_roxellana
ENSFDAG00000001572	R3HCC1	99	69.593	ENSSBOG00000022590	R3HCC1	99	69.379	Saimiri_boliviensis_boliviensis
ENSFDAG00000001572	R3HCC1	57	79.787	ENSSHAG00000016526	-	98	45.363	Sarcophilus_harrisii
ENSFDAG00000001572	R3HCC1	91	34.752	ENSSFOG00015013507	r3hcc1	69	48.592	Scleropages_formosus
ENSFDAG00000001572	R3HCC1	92	32.426	ENSSMAG00000008647	r3hcc1	98	31.935	Scophthalmus_maximus
ENSFDAG00000001572	R3HCC1	50	75.912	ENSSARG00000013514	-	53	75.912	Sorex_araneus
ENSFDAG00000001572	R3HCC1	60	44.898	ENSSPAG00000013497	r3hcc1	67	46.154	Stegastes_partitus
ENSFDAG00000001572	R3HCC1	99	59.789	ENSSSCG00000037347	-	93	59.789	Sus_scrofa
ENSFDAG00000001572	R3HCC1	98	66.161	ENSSSCG00000039915	-	92	66.161	Sus_scrofa
ENSFDAG00000001572	R3HCC1	96	30.631	ENSTRUG00000015880	r3hcc1	92	41.912	Takifugu_rubripes
ENSFDAG00000001572	R3HCC1	98	61.707	ENSTTRG00000012247	R3HCC1	94	61.926	Tursiops_truncatus
ENSFDAG00000001572	R3HCC1	99	66.307	ENSUAMG00000007344	R3HCC1	99	66.307	Ursus_americanus
ENSFDAG00000001572	R3HCC1	99	64.859	ENSVVUG00000005056	R3HCC1	95	65.076	Vulpes_vulpes