EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000002516 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 10047 bases
Position: chrKN122118.1:495855-505901
Accession: 104862959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000014913	TruB_N	PF01509.18	1.1e-21	1	1
ENSFDAP00000014922	TruB_N	PF01509.18	1.1e-21	1	1
ENSFDAP00000014913	PUA	PF01472.20	2.1e-18	1	1
ENSFDAP00000014922	PUA	PF01472.20	6.4e-18	1	1
ENSFDAP00000014922	DKCLD	PF08068.12	8.8e-32	1	1
ENSFDAP00000014913	DKCLD	PF08068.12	9.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000004376	DKC1-201	1530	XM_010625195	ENSFDAP00000014913	509 (aa)	XP_010623497	-
ENSFDAT00000004395	DKC1-202	1491	-	ENSFDAP00000014922	496 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000002516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000002516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000002516	DKC1	100	93.124	ENSG00000130826	DKC1	99	98.058	Homo_sapiens
ENSFDAG00000002516	DKC1	85	81.967	ENSAPOG00000007799	dkc1	91	77.538	Acanthochromis_polyacanthus
ENSFDAG00000002516	DKC1	89	93.407	ENSAMEG00000002776	DKC1	95	90.816	Ailuropoda_melanoleuca
ENSFDAG00000002516	DKC1	93	75.847	ENSACIG00000022614	dkc1	90	81.206	Amphilophus_citrinellus
ENSFDAG00000002516	DKC1	94	77.053	ENSAOCG00000013159	dkc1	93	78.571	Amphiprion_ocellaris
ENSFDAG00000002516	DKC1	94	77.070	ENSAPEG00000002284	dkc1	93	78.431	Amphiprion_percula
ENSFDAG00000002516	DKC1	88	79.279	ENSATEG00000013682	dkc1	85	80.137	Anabas_testudineus
ENSFDAG00000002516	DKC1	87	84.199	ENSACAG00000015600	DKC1	76	84.199	Anolis_carolinensis
ENSFDAG00000002516	DKC1	100	91.159	ENSANAG00000022732	DKC1	96	91.260	Aotus_nancymaae
ENSFDAG00000002516	DKC1	83	83.738	ENSACLG00000015605	dkc1	84	83.738	Astatotilapia_calliptera
ENSFDAG00000002516	DKC1	87	81.206	ENSAMXG00000017108	dkc1	85	80.974	Astyanax_mexicanus
ENSFDAG00000002516	DKC1	97	89.431	ENSBTAG00000013045	DKC1	96	89.431	Bos_taurus
ENSFDAG00000002516	DKC1	81	67.246	WBGene00010478	K01G5.5	97	64.138	Caenorhabditis_elegans
ENSFDAG00000002516	DKC1	100	92.353	ENSCJAG00000004210	DKC1	96	92.495	Callithrix_jacchus
ENSFDAG00000002516	DKC1	100	87.283	ENSCAFG00000019620	-	96	88.247	Canis_familiaris
ENSFDAG00000002516	DKC1	93	79.665	ENSCAFG00000009311	-	92	79.665	Canis_familiaris
ENSFDAG00000002516	DKC1	100	87.283	ENSCAFG00020008918	-	96	88.247	Canis_lupus_dingo
ENSFDAG00000002516	DKC1	93	79.493	ENSCAFG00020009379	-	88	79.493	Canis_lupus_dingo
ENSFDAG00000002516	DKC1	100	88.998	ENSCHIG00000017392	DKC1	96	89.634	Capra_hircus
ENSFDAG00000002516	DKC1	100	91.522	ENSTSYG00000007681	DKC1	96	91.434	Carlito_syrichta
ENSFDAG00000002516	DKC1	85	95.862	ENSCAPG00000003342	DKC1	99	95.862	Cavia_aperea
ENSFDAG00000002516	DKC1	99	94.685	ENSCPOG00000008825	DKC1	99	94.685	Cavia_porcellus
ENSFDAG00000002516	DKC1	100	84.086	ENSCCAG00000027418	DKC1	95	84.114	Cebus_capucinus
ENSFDAG00000002516	DKC1	100	92.338	ENSCATG00000033602	DKC1	96	92.480	Cercocebus_atys
ENSFDAG00000002516	DKC1	99	95.669	ENSCLAG00000000720	DKC1	97	95.927	Chinchilla_lanigera
ENSFDAG00000002516	DKC1	100	92.534	ENSCSAG00000006706	DKC1	96	92.683	Chlorocebus_sabaeus
ENSFDAG00000002516	DKC1	90	83.036	ENSCPBG00000005858	DKC1	89	87.619	Chrysemys_picta_bellii
ENSFDAG00000002516	DKC1	83	74.941	ENSCING00000004599	-	82	74.023	Ciona_intestinalis
ENSFDAG00000002516	DKC1	92	71.024	ENSCSAVG00000010047	-	96	73.550	Ciona_savignyi
ENSFDAG00000002516	DKC1	100	92.534	ENSCANG00000027987	DKC1	96	92.683	Colobus_angolensis_palliatus
ENSFDAG00000002516	DKC1	94	66.597	ENSCGRG00001016789	-	94	66.383	Cricetulus_griseus_chok1gshd
ENSFDAG00000002516	DKC1	97	91.667	ENSCGRG00001014574	-	96	91.667	Cricetulus_griseus_chok1gshd
ENSFDAG00000002516	DKC1	97	91.667	ENSCGRG00000016075	-	96	91.667	Cricetulus_griseus_crigri
ENSFDAG00000002516	DKC1	96	65.918	ENSCGRG00000014809	-	93	66.034	Cricetulus_griseus_crigri
ENSFDAG00000002516	DKC1	94	78.158	ENSCSEG00000012633	dkc1	94	78.747	Cynoglossus_semilaevis
ENSFDAG00000002516	DKC1	88	80.092	ENSCVAG00000010155	dkc1	88	78.761	Cyprinodon_variegatus
ENSFDAG00000002516	DKC1	80	85.930	ENSDARG00000016484	dkc1	85	81.524	Danio_rerio
ENSFDAG00000002516	DKC1	100	92.338	ENSDNOG00000004218	DKC1	96	92.276	Dasypus_novemcinctus
ENSFDAG00000002516	DKC1	58	83.729	ENSDORG00000013566	-	98	83.729	Dipodomys_ordii
ENSFDAG00000002516	DKC1	87	69.565	FBgn0259937	Nop60B	89	67.980	Drosophila_melanogaster
ENSFDAG00000002516	DKC1	88	87.220	ENSETEG00000016095	DKC1	89	87.927	Echinops_telfairi
ENSFDAG00000002516	DKC1	68	78.571	ENSEBUG00000015962	dkc1	99	82.594	Eptatretus_burgeri
ENSFDAG00000002516	DKC1	100	88.781	ENSEASG00005007484	DKC1	96	89.400	Equus_asinus_asinus
ENSFDAG00000002516	DKC1	100	88.781	ENSECAG00000023524	DKC1	96	89.400	Equus_caballus
ENSFDAG00000002516	DKC1	79	93.590	ENSEEUG00000003323	DKC1	99	89.176	Erinaceus_europaeus
ENSFDAG00000002516	DKC1	87	81.549	ENSELUG00000014538	dkc1	90	79.148	Esox_lucius
ENSFDAG00000002516	DKC1	100	90.766	ENSFCAG00000006577	DKC1	96	90.854	Felis_catus
ENSFDAG00000002516	DKC1	86	83.333	ENSFALG00000011496	DKC1	85	82.628	Ficedula_albicollis
ENSFDAG00000002516	DKC1	86	80.886	ENSFHEG00000004627	dkc1	91	77.293	Fundulus_heteroclitus
ENSFDAG00000002516	DKC1	79	82.864	ENSGMOG00000017277	dkc1	100	82.864	Gadus_morhua
ENSFDAG00000002516	DKC1	86	86.697	ENSGALG00000005054	DKC1	85	85.553	Gallus_gallus
ENSFDAG00000002516	DKC1	88	80.876	ENSGAFG00000011486	dkc1	73	81.776	Gambusia_affinis
ENSFDAG00000002516	DKC1	80	86.181	ENSGACG00000004373	dkc1	96	88.754	Gasterosteus_aculeatus
ENSFDAG00000002516	DKC1	87	85.780	ENSGAGG00000011330	DKC1	84	85.780	Gopherus_agassizii
ENSFDAG00000002516	DKC1	100	93.124	ENSGGOG00000001045	DKC1	96	93.293	Gorilla_gorilla
ENSFDAG00000002516	DKC1	87	80.742	ENSHBUG00000012436	dkc1	89	78.652	Haplochromis_burtoni
ENSFDAG00000002516	DKC1	97	92.727	ENSHGLG00000000649	DKC1	96	93.131	Heterocephalus_glaber_female
ENSFDAG00000002516	DKC1	96	92.713	ENSHGLG00100001153	DKC1	97	93.117	Heterocephalus_glaber_male
ENSFDAG00000002516	DKC1	87	80.974	ENSHCOG00000021099	dkc1	85	81.776	Hippocampus_comes
ENSFDAG00000002516	DKC1	85	81.364	ENSIPUG00000010309	dkc1	84	81.193	Ictalurus_punctatus
ENSFDAG00000002516	DKC1	97	81.984	ENSSTOG00000011904	-	92	81.984	Ictidomys_tridecemlineatus
ENSFDAG00000002516	DKC1	90	93.709	ENSSTOG00000001074	-	94	94.311	Ictidomys_tridecemlineatus
ENSFDAG00000002516	DKC1	100	84.086	ENSSTOG00000020149	-	96	83.537	Ictidomys_tridecemlineatus
ENSFDAG00000002516	DKC1	58	84.068	ENSJJAG00000010086	-	98	84.068	Jaculus_jaculus
ENSFDAG00000002516	DKC1	86	79.907	ENSKMAG00000008010	dkc1	86	78.458	Kryptolebias_marmoratus
ENSFDAG00000002516	DKC1	85	81.308	ENSLBEG00000019122	dkc1	88	81.019	Labrus_bergylta
ENSFDAG00000002516	DKC1	88	82.232	ENSLACG00000014025	DKC1	94	86.683	Latimeria_chalumnae
ENSFDAG00000002516	DKC1	88	83.066	ENSLOCG00000013713	dkc1	87	85.680	Lepisosteus_oculatus
ENSFDAG00000002516	DKC1	96	90.631	ENSLAFG00000000221	DKC1	94	91.116	Loxodonta_africana
ENSFDAG00000002516	DKC1	100	92.338	ENSMFAG00000032398	DKC1	82	92.480	Macaca_fascicularis
ENSFDAG00000002516	DKC1	100	92.534	ENSMMUG00000005768	DKC1	96	92.683	Macaca_mulatta
ENSFDAG00000002516	DKC1	100	92.534	ENSMNEG00000034503	DKC1	96	92.683	Macaca_nemestrina
ENSFDAG00000002516	DKC1	100	92.534	ENSMLEG00000034422	DKC1	96	92.683	Mandrillus_leucophaeus
ENSFDAG00000002516	DKC1	81	86.284	ENSMAMG00000005427	dkc1	89	86.466	Mastacembelus_armatus
ENSFDAG00000002516	DKC1	87	80.974	ENSMZEG00005014503	dkc1	89	78.876	Maylandia_zebra
ENSFDAG00000002516	DKC1	78	86.935	ENSMGAG00000009238	DKC1	87	85.468	Meleagris_gallopavo
ENSFDAG00000002516	DKC1	58	84.429	ENSMAUG00000016454	-	98	84.068	Mesocricetus_auratus
ENSFDAG00000002516	DKC1	90	83.261	ENSMICG00000002818	-	99	83.014	Microcebus_murinus
ENSFDAG00000002516	DKC1	100	91.051	ENSMICG00000038751	-	96	91.129	Microcebus_murinus
ENSFDAG00000002516	DKC1	58	81.695	ENSMOCG00000001169	-	98	81.695	Microtus_ochrogaster
ENSFDAG00000002516	DKC1	81	85.250	ENSMMOG00000020348	dkc1	87	85.464	Mola_mola
ENSFDAG00000002516	DKC1	85	87.179	ENSMODG00000009243	DKC1	74	87.972	Monodelphis_domestica
ENSFDAG00000002516	DKC1	87	79.638	ENSMALG00000009454	dkc1	83	81.647	Monopterus_albus
ENSFDAG00000002516	DKC1	97	80.000	MGP_CAROLIEiJ_G0033191	Dkc1	97	94.444	Mus_caroli
ENSFDAG00000002516	DKC1	97	90.244	ENSMUSG00000031403	Dkc1	96	89.634	Mus_musculus
ENSFDAG00000002516	DKC1	97	90.041	MGP_PahariEiJ_G0031735	Dkc1	96	91.260	Mus_pahari
ENSFDAG00000002516	DKC1	97	90.041	MGP_SPRETEiJ_G0034351	Dkc1	96	89.837	Mus_spretus
ENSFDAG00000002516	DKC1	99	87.838	ENSMPUG00000016136	DKC1	92	88.600	Mustela_putorius_furo
ENSFDAG00000002516	DKC1	89	87.281	ENSMLUG00000011918	DKC1	96	83.665	Myotis_lucifugus
ENSFDAG00000002516	DKC1	58	85.121	ENSNGAG00000015724	-	98	84.354	Nannospalax_galili
ENSFDAG00000002516	DKC1	83	84.428	ENSNBRG00000005638	dkc1	83	84.019	Neolamprologus_brichardi
ENSFDAG00000002516	DKC1	100	92.927	ENSNLEG00000014323	DKC1	96	93.279	Nomascus_leucogenys
ENSFDAG00000002516	DKC1	92	78.801	ENSMEUG00000001066	DKC1	88	87.500	Notamacropus_eugenii
ENSFDAG00000002516	DKC1	90	89.617	ENSOPRG00000005248	DKC1	88	89.617	Ochotona_princeps
ENSFDAG00000002516	DKC1	85	95.128	ENSODEG00000011816	-	89	93.640	Octodon_degus
ENSFDAG00000002516	DKC1	60	84.175	ENSODEG00000000549	-	98	85.424	Octodon_degus
ENSFDAG00000002516	DKC1	94	76.289	ENSONIG00000013889	dkc1	94	76.701	Oreochromis_niloticus
ENSFDAG00000002516	DKC1	93	87.265	ENSOANG00000008713	-	96	87.207	Ornithorhynchus_anatinus
ENSFDAG00000002516	DKC1	66	64.571	ENSOANG00000022295	-	95	63.930	Ornithorhynchus_anatinus
ENSFDAG00000002516	DKC1	97	91.463	ENSOCUG00000012646	DKC1	96	91.057	Oryctolagus_cuniculus
ENSFDAG00000002516	DKC1	92	78.112	ENSORLG00000018748	dkc1	90	77.447	Oryzias_latipes
ENSFDAG00000002516	DKC1	86	82.284	ENSOMEG00000005786	dkc1	90	81.609	Oryzias_melastigma
ENSFDAG00000002516	DKC1	100	89.403	ENSOGAG00000003399	DKC1	96	89.841	Otolemur_garnettii
ENSFDAG00000002516	DKC1	100	88.802	ENSOARG00000003047	DKC1	96	89.431	Ovis_aries
ENSFDAG00000002516	DKC1	100	92.731	ENSPPAG00000023820	DKC1	96	92.886	Pan_paniscus
ENSFDAG00000002516	DKC1	89	94.273	ENSPPRG00000009104	DKC1	96	90.854	Panthera_pardus
ENSFDAG00000002516	DKC1	89	91.630	ENSPTIG00000017469	DKC1	96	88.415	Panthera_tigris_altaica
ENSFDAG00000002516	DKC1	97	93.293	ENSPTRG00000043416	-	83	93.293	Pan_troglodytes
ENSFDAG00000002516	DKC1	100	93.124	ENSPTRG00000022449	DKC1	96	93.293	Pan_troglodytes
ENSFDAG00000002516	DKC1	100	92.534	ENSPANG00000011978	DKC1	96	92.683	Papio_anubis
ENSFDAG00000002516	DKC1	85	84.309	ENSPKIG00000008443	dkc1	89	84.309	Paramormyrops_kingsleyae
ENSFDAG00000002516	DKC1	72	92.737	ENSPSIG00000013765	DKC1	86	92.737	Pelodiscus_sinensis
ENSFDAG00000002516	DKC1	86	76.233	ENSPMGG00000004097	dkc1	82	75.893	Periophthalmus_magnuspinnatus
ENSFDAG00000002516	DKC1	95	97.906	ENSPEMG00000013348	Dkc1	93	97.906	Peromyscus_maniculatus_bairdii
ENSFDAG00000002516	DKC1	84	88.551	ENSPCIG00000016706	DKC1	73	87.844	Phascolarctos_cinereus
ENSFDAG00000002516	DKC1	94	76.082	ENSPFOG00000018653	dkc1	94	76.033	Poecilia_formosa
ENSFDAG00000002516	DKC1	94	76.082	ENSPLAG00000003272	dkc1	85	76.033	Poecilia_latipinna
ENSFDAG00000002516	DKC1	86	81.585	ENSPMEG00000010413	dkc1	85	81.585	Poecilia_mexicana
ENSFDAG00000002516	DKC1	88	81.922	ENSPREG00000004100	dkc1	84	82.831	Poecilia_reticulata
ENSFDAG00000002516	DKC1	100	92.927	ENSPPYG00000020892	DKC1	97	93.089	Pongo_abelii
ENSFDAG00000002516	DKC1	73	94.751	ENSPCAG00000015034	DKC1	73	93.583	Procavia_capensis
ENSFDAG00000002516	DKC1	100	92.534	ENSPCOG00000026874	DKC1	96	92.872	Propithecus_coquereli
ENSFDAG00000002516	DKC1	99	88.911	ENSPVAG00000009222	DKC1	96	89.206	Pteropus_vampyrus
ENSFDAG00000002516	DKC1	86	80.182	ENSPNYG00000020063	dkc1	88	79.819	Pundamilia_nyererei
ENSFDAG00000002516	DKC1	88	80.092	ENSPNAG00000005780	dkc1	86	80.974	Pygocentrus_nattereri
ENSFDAG00000002516	DKC1	96	82.004	ENSRNOG00000055562	Dkc1	95	81.837	Rattus_norvegicus
ENSFDAG00000002516	DKC1	100	92.534	ENSRBIG00000028457	DKC1	82	92.683	Rhinopithecus_bieti
ENSFDAG00000002516	DKC1	100	92.534	ENSRROG00000044780	DKC1	96	92.683	Rhinopithecus_roxellana
ENSFDAG00000002516	DKC1	77	71.615	YLR175W	-	88	66.509	Saccharomyces_cerevisiae
ENSFDAG00000002516	DKC1	100	92.157	ENSSBOG00000033746	DKC1	96	92.886	Saimiri_boliviensis_boliviensis
ENSFDAG00000002516	DKC1	86	87.674	ENSSHAG00000002463	DKC1	92	87.472	Sarcophilus_harrisii
ENSFDAG00000002516	DKC1	88	80.493	ENSSFOG00015009585	dkc1	85	82.028	Scleropages_formosus
ENSFDAG00000002516	DKC1	87	82.028	ENSSMAG00000002552	dkc1	88	80.320	Scophthalmus_maximus
ENSFDAG00000002516	DKC1	94	76.715	ENSSDUG00000009963	dkc1	94	75.770	Seriola_dumerili
ENSFDAG00000002516	DKC1	92	77.564	ENSSLDG00000019342	dkc1	90	81.293	Seriola_lalandi_dorsalis
ENSFDAG00000002516	DKC1	96	82.992	ENSSARG00000001822	DKC1	96	82.787	Sorex_araneus
ENSFDAG00000002516	DKC1	89	84.091	ENSSPUG00000018907	DKC1	85	84.889	Sphenodon_punctatus
ENSFDAG00000002516	DKC1	86	82.243	ENSSPAG00000002585	dkc1	86	78.174	Stegastes_partitus
ENSFDAG00000002516	DKC1	100	89.210	ENSSSCG00000012823	DKC1	95	91.904	Sus_scrofa
ENSFDAG00000002516	DKC1	90	80.088	ENSTGUG00000006781	DKC1	97	80.361	Taeniopygia_guttata
ENSFDAG00000002516	DKC1	85	82.506	ENSTRUG00000004413	dkc1	85	82.506	Takifugu_rubripes
ENSFDAG00000002516	DKC1	91	63.326	ENSTNIG00000002582	dkc1	86	65.455	Tetraodon_nigroviridis
ENSFDAG00000002516	DKC1	72	91.209	ENSTBEG00000011262	DKC1	95	90.778	Tupaia_belangeri
ENSFDAG00000002516	DKC1	70	99.278	ENSTTRG00000008089	DKC1	69	99.278	Tursiops_truncatus
ENSFDAG00000002516	DKC1	96	87.269	ENSUAMG00000022721	DKC1	93	94.558	Ursus_americanus
ENSFDAG00000002516	DKC1	96	86.448	ENSUMAG00000016899	DKC1	100	91.951	Ursus_maritimus
ENSFDAG00000002516	DKC1	93	73.895	ENSVVUG00000021671	-	87	73.895	Vulpes_vulpes
ENSFDAG00000002516	DKC1	100	86.312	ENSVVUG00000020734	-	87	87.426	Vulpes_vulpes
ENSFDAG00000002516	DKC1	93	80.562	ENSXETG00000032517	DKC1	96	73.570	Xenopus_tropicalis
ENSFDAG00000002516	DKC1	88	81.379	ENSXCOG00000005498	dkc1	91	82.284	Xiphophorus_couchianus
ENSFDAG00000002516	DKC1	88	80.920	ENSXMAG00000004919	dkc1	86	81.818	Xiphophorus_maculatus