EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000003796 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1440 bases
Position: chrKN122584.1:606328-607767
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000015721	La	PF05383.17	1.1e-14	1	1
ENSFDAP00000015727	La	PF05383.17	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000006066	-	585	-	ENSFDAP00000015727	194 (aa)	-	-
ENSFDAT00000006049	-	552	-	ENSFDAP00000015721	183 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000003796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000003796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000003796	-	98	85.556	ENSG00000161813	LARP4	96	85.556	Homo_sapiens
ENSFDAG00000003796	-	86	62.195	ENSACIG00000000370	-	83	62.195	Amphilophus_citrinellus
ENSFDAG00000003796	-	75	79.710	ENSACIG00000001198	larp4aa	77	78.986	Amphilophus_citrinellus
ENSFDAG00000003796	-	81	70.667	ENSAPEG00000015441	larp4ab	72	63.750	Amphiprion_percula
ENSFDAG00000003796	-	95	66.667	ENSCCAG00000030343	-	92	66.667	Cebus_capucinus
ENSFDAG00000003796	-	95	71.264	ENSCATG00000039611	-	93	71.264	Cercocebus_atys
ENSFDAG00000003796	-	100	73.224	ENSCANG00000033097	-	68	75.287	Colobus_angolensis_palliatus
ENSFDAG00000003796	-	95	79.885	ENSCGRG00001000311	-	91	79.885	Cricetulus_griseus_chok1gshd
ENSFDAG00000003796	-	95	81.034	ENSCGRG00001011674	-	82	81.034	Cricetulus_griseus_chok1gshd
ENSFDAG00000003796	-	95	78.736	ENSCGRG00001011032	-	78	78.736	Cricetulus_griseus_chok1gshd
ENSFDAG00000003796	-	99	78.022	ENSCGRG00000000087	-	96	78.212	Cricetulus_griseus_crigri
ENSFDAG00000003796	-	83	64.901	ENSCVAG00000001411	-	85	64.901	Cyprinodon_variegatus
ENSFDAG00000003796	-	88	71.856	ENSDARG00000074979	larp4ab	85	74.172	Danio_rerio
ENSFDAG00000003796	-	86	64.242	ENSHBUG00000021929	-	79	64.242	Haplochromis_burtoni
ENSFDAG00000003796	-	100	84.153	ENSHGLG00100000622	-	86	84.153	Heterocephalus_glaber_male
ENSFDAG00000003796	-	99	73.626	ENSJJAG00000014649	-	95	73.626	Jaculus_jaculus
ENSFDAG00000003796	-	95	72.989	ENSMFAG00000001037	-	93	72.989	Macaca_fascicularis
ENSFDAG00000003796	-	95	72.989	ENSMMUG00000045683	-	93	72.989	Macaca_mulatta
ENSFDAG00000003796	-	95	68.966	ENSMNEG00000037799	-	87	74.658	Macaca_nemestrina
ENSFDAG00000003796	-	86	73.885	ENSMLEG00000038232	-	88	73.885	Mandrillus_leucophaeus
ENSFDAG00000003796	-	100	77.596	ENSMICG00000030156	-	84	77.596	Microcebus_murinus
ENSFDAG00000003796	-	94	87.209	ENSMICG00000046883	-	95	87.209	Microcebus_murinus
ENSFDAG00000003796	-	93	64.088	ENSMMOG00000021861	larp4ab	50	64.088	Mola_mola
ENSFDAG00000003796	-	72	84.091	ENSMODG00000004844	-	75	74.051	Monodelphis_domestica
ENSFDAG00000003796	-	90	69.697	ENSMALG00000018631	larp4aa	84	69.697	Monopterus_albus
ENSFDAG00000003796	-	89	64.740	ENSMALG00000015637	-	74	64.740	Monopterus_albus
ENSFDAG00000003796	-	90	63.953	ENSNBRG00000015675	larp4ab	85	63.291	Neolamprologus_brichardi
ENSFDAG00000003796	-	85	63.226	ENSORLG00000018835	-	74	63.226	Oryzias_latipes
ENSFDAG00000003796	-	80	66.438	ENSORLG00020009602	-	70	66.438	Oryzias_latipes_hni
ENSFDAG00000003796	-	95	56.354	ENSORLG00015005865	-	88	56.354	Oryzias_latipes_hsok
ENSFDAG00000003796	-	89	70.370	ENSOMEG00000019749	larp4aa	82	70.370	Oryzias_melastigma
ENSFDAG00000003796	-	79	68.056	ENSOMEG00000008561	-	75	68.056	Oryzias_melastigma
ENSFDAG00000003796	-	95	74.138	ENSPTRG00000045907	-	52	68.478	Pan_troglodytes
ENSFDAG00000003796	-	78	78.873	ENSPMGG00000023289	-	93	78.873	Periophthalmus_magnuspinnatus
ENSFDAG00000003796	-	81	64.189	ENSPMAG00000001038	-	57	65.734	Petromyzon_marinus
ENSFDAG00000003796	-	84	66.667	ENSPREG00000016263	larp4ab	75	66.667	Poecilia_reticulata
ENSFDAG00000003796	-	75	83.212	ENSPPYG00000006330	-	72	76.582	Pongo_abelii
ENSFDAG00000003796	-	86	64.242	ENSPNYG00000000915	-	68	64.242	Pundamilia_nyererei
ENSFDAG00000003796	-	74	75.556	ENSRNOG00000057943	AABR07058884.2	74	70.886	Rattus_norvegicus
ENSFDAG00000003796	-	91	69.461	ENSSBOG00000035851	-	91	69.461	Saimiri_boliviensis_boliviensis
ENSFDAG00000003796	-	78	79.021	ENSSPAG00000007222	larp4aa	74	77.778	Stegastes_partitus
ENSFDAG00000003796	-	95	63.536	ENSXCOG00000019635	larp4ab	83	63.536	Xiphophorus_couchianus