EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000003871 (Gene tree)
Gene ID: 104873909
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 28304 bases
Position: chrKN123228.1:2921999-2950302
Accession: 104873909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020069	DUF1604	PF07713.13	4.4e-36	1	1
ENSFDAP00000020069	G-patch	PF01585.23	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012205	GPATCH1-201	2649	XM_010640853	ENSFDAP00000020069	882 (aa)	XP_010639155	-

Gene Model

Click here to download ENSFDAG00000003871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000003871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000003871	GPATCH1	100	82.202	ENSG00000076650	GPATCH1	96	82.870	Homo_sapiens
ENSFDAG00000003871	GPATCH1	100	83.073	ENSAMEG00000015575	GPATCH1	96	82.962	Ailuropoda_melanoleuca
ENSFDAG00000003871	GPATCH1	86	69.032	ENSAOCG00000006668	gpatch1	72	69.032	Amphiprion_ocellaris
ENSFDAG00000003871	GPATCH1	82	55.376	ENSAPEG00000000026	gpatch1	87	51.905	Amphiprion_percula
ENSFDAG00000003871	GPATCH1	90	49.354	ENSATEG00000014494	gpatch1	87	50.234	Anabas_testudineus
ENSFDAG00000003871	GPATCH1	93	60.654	ENSAPLG00000007584	GPATCH1	96	60.880	Anas_platyrhynchos
ENSFDAG00000003871	GPATCH1	100	79.755	ENSANAG00000027002	GPATCH1	96	82.536	Aotus_nancymaae
ENSFDAG00000003871	GPATCH1	82	53.836	ENSACLG00000024740	gpatch1	76	53.571	Astatotilapia_calliptera
ENSFDAG00000003871	GPATCH1	92	51.736	ENSAMXG00000020177	gpatch1	94	51.461	Astyanax_mexicanus
ENSFDAG00000003871	GPATCH1	92	81.917	ENSBTAG00000000721	GPATCH1	96	81.737	Bos_taurus
ENSFDAG00000003871	GPATCH1	70	30.901	WBGene00011109	R07E5.1	66	30.901	Caenorhabditis_elegans
ENSFDAG00000003871	GPATCH1	100	79.422	ENSCJAG00000000684	GPATCH1	96	82.202	Callithrix_jacchus
ENSFDAG00000003871	GPATCH1	100	82.647	ENSCAFG00000007457	GPATCH1	81	82.425	Canis_familiaris
ENSFDAG00000003871	GPATCH1	94	82.568	ENSCAFG00020019731	GPATCH1	89	82.930	Canis_lupus_dingo
ENSFDAG00000003871	GPATCH1	100	82.405	ENSCHIG00000019626	GPATCH1	97	82.628	Capra_hircus
ENSFDAG00000003871	GPATCH1	99	81.236	ENSCAPG00000008827	GPATCH1	99	82.022	Cavia_aperea
ENSFDAG00000003871	GPATCH1	100	82.647	ENSCPOG00000024477	GPATCH1	99	82.304	Cavia_porcellus
ENSFDAG00000003871	GPATCH1	100	78.912	ENSCCAG00000024676	GPATCH1	96	82.091	Cebus_capucinus
ENSFDAG00000003871	GPATCH1	100	81.869	ENSCATG00000043637	GPATCH1	96	82.425	Cercocebus_atys
ENSFDAG00000003871	GPATCH1	99	84.122	ENSCLAG00000003395	-	100	84.685	Chinchilla_lanigera
ENSFDAG00000003871	GPATCH1	92	80.895	ENSCSAG00000004743	GPATCH1	89	80.774	Chlorocebus_sabaeus
ENSFDAG00000003871	GPATCH1	85	74.189	ENSCHOG00000012865	GPATCH1	89	73.930	Choloepus_hoffmanni
ENSFDAG00000003871	GPATCH1	82	68.132	ENSCPBG00000000666	GPATCH1	93	68.378	Chrysemys_picta_bellii
ENSFDAG00000003871	GPATCH1	94	31.787	ENSCING00000012518	-	80	34.979	Ciona_intestinalis
ENSFDAG00000003871	GPATCH1	88	83.668	ENSCANG00000012540	GPATCH1	96	87.568	Colobus_angolensis_palliatus
ENSFDAG00000003871	GPATCH1	99	78.309	ENSCGRG00001016736	Gpatch1	99	78.357	Cricetulus_griseus_chok1gshd
ENSFDAG00000003871	GPATCH1	97	67.079	ENSCGRG00000005069	Gpatch1	90	66.116	Cricetulus_griseus_crigri
ENSFDAG00000003871	GPATCH1	81	48.571	ENSCSEG00000019456	-	90	48.571	Cynoglossus_semilaevis
ENSFDAG00000003871	GPATCH1	90	49.773	ENSDARG00000033418	gpatch1	78	53.516	Danio_rerio
ENSFDAG00000003871	GPATCH1	92	81.917	ENSDNOG00000005291	GPATCH1	92	81.675	Dasypus_novemcinctus
ENSFDAG00000003871	GPATCH1	94	77.262	ENSDORG00000012546	Gpatch1	92	77.234	Dipodomys_ordii
ENSFDAG00000003871	GPATCH1	99	71.715	ENSETEG00000003626	GPATCH1	90	71.913	Echinops_telfairi
ENSFDAG00000003871	GPATCH1	94	36.322	ENSEBUG00000011286	gpatch1	89	37.146	Eptatretus_burgeri
ENSFDAG00000003871	GPATCH1	91	83.847	ENSEASG00005021162	GPATCH1	90	84.805	Equus_asinus_asinus
ENSFDAG00000003871	GPATCH1	94	83.039	ENSECAG00000022743	GPATCH1	86	83.152	Equus_caballus
ENSFDAG00000003871	GPATCH1	77	79.330	ENSEEUG00000012925	GPATCH1	70	79.330	Erinaceus_europaeus
ENSFDAG00000003871	GPATCH1	91	49.366	ENSELUG00000018195	gpatch1	88	50.234	Esox_lucius
ENSFDAG00000003871	GPATCH1	100	82.405	ENSFCAG00000014917	GPATCH1	96	82.405	Felis_catus
ENSFDAG00000003871	GPATCH1	100	60.818	ENSFALG00000007821	GPATCH1	87	63.801	Ficedula_albicollis
ENSFDAG00000003871	GPATCH1	82	46.345	ENSGMOG00000003830	gpatch1	92	43.634	Gadus_morhua
ENSFDAG00000003871	GPATCH1	93	63.251	ENSGALG00000004839	GPATCH1	91	64.156	Gallus_gallus
ENSFDAG00000003871	GPATCH1	90	49.578	ENSGACG00000017544	gpatch1	81	51.678	Gasterosteus_aculeatus
ENSFDAG00000003871	GPATCH1	91	62.107	ENSGAGG00000010067	GPATCH1	88	63.548	Gopherus_agassizii
ENSFDAG00000003871	GPATCH1	100	82.091	ENSGGOG00000010862	GPATCH1	99	82.759	Gorilla_gorilla
ENSFDAG00000003871	GPATCH1	82	54.183	ENSHBUG00000023462	gpatch1	87	50.526	Haplochromis_burtoni
ENSFDAG00000003871	GPATCH1	100	89.621	ENSHGLG00000009334	GPATCH1	100	86.303	Heterocephalus_glaber_female
ENSFDAG00000003871	GPATCH1	100	89.732	ENSHGLG00100018074	GPATCH1	99	86.257	Heterocephalus_glaber_male
ENSFDAG00000003871	GPATCH1	93	51.587	ENSIPUG00000014977	gpatch1	87	52.471	Ictalurus_punctatus
ENSFDAG00000003871	GPATCH1	99	82.346	ENSSTOG00000003720	GPATCH1	96	81.899	Ictidomys_tridecemlineatus
ENSFDAG00000003871	GPATCH1	92	80.316	ENSJJAG00000023765	Gpatch1	96	79.376	Jaculus_jaculus
ENSFDAG00000003871	GPATCH1	90	51.319	ENSKMAG00000017950	gpatch1	92	49.610	Kryptolebias_marmoratus
ENSFDAG00000003871	GPATCH1	82	52.659	ENSLBEG00000026527	gpatch1	85	51.166	Labrus_bergylta
ENSFDAG00000003871	GPATCH1	91	58.981	ENSLACG00000008130	GPATCH1	90	58.617	Latimeria_chalumnae
ENSFDAG00000003871	GPATCH1	82	56.988	ENSLOCG00000001800	gpatch1	78	57.259	Lepisosteus_oculatus
ENSFDAG00000003871	GPATCH1	99	81.767	ENSLAFG00000013589	GPATCH1	96	81.737	Loxodonta_africana
ENSFDAG00000003871	GPATCH1	91	82.987	ENSMFAG00000034418	GPATCH1	92	82.864	Macaca_fascicularis
ENSFDAG00000003871	GPATCH1	100	81.556	ENSMMUG00000011790	GPATCH1	97	82.222	Macaca_mulatta
ENSFDAG00000003871	GPATCH1	99	81.514	ENSMNEG00000045084	GPATCH1	98	82.183	Macaca_nemestrina
ENSFDAG00000003871	GPATCH1	87	74.745	ENSMLEG00000043840	GPATCH1	88	74.490	Mandrillus_leucophaeus
ENSFDAG00000003871	GPATCH1	82	53.826	ENSMZEG00005001926	gpatch1	77	53.623	Maylandia_zebra
ENSFDAG00000003871	GPATCH1	92	63.329	ENSMGAG00000005775	GPATCH1	87	63.759	Meleagris_gallopavo
ENSFDAG00000003871	GPATCH1	91	73.512	ENSMICG00000004829	GPATCH1	90	72.783	Microcebus_murinus
ENSFDAG00000003871	GPATCH1	100	78.627	ENSMOCG00000000174	Gpatch1	97	78.959	Microtus_ochrogaster
ENSFDAG00000003871	GPATCH1	84	50.000	ENSMMOG00000002140	gpatch1	94	47.602	Mola_mola
ENSFDAG00000003871	GPATCH1	92	70.545	ENSMODG00000012226	GPATCH1	88	71.030	Monodelphis_domestica
ENSFDAG00000003871	GPATCH1	82	52.818	ENSMALG00000014386	gpatch1	90	50.000	Monopterus_albus
ENSFDAG00000003871	GPATCH1	100	81.271	ENSMUSG00000063808	Gpatch1	96	81.271	Mus_musculus
ENSFDAG00000003871	GPATCH1	100	81.090	MGP_PahariEiJ_G0012816	Gpatch1	96	80.756	Mus_pahari
ENSFDAG00000003871	GPATCH1	100	80.645	MGP_SPRETEiJ_G0030681	Gpatch1	96	80.534	Mus_spretus
ENSFDAG00000003871	GPATCH1	100	82.294	ENSMPUG00000007658	GPATCH1	96	82.405	Mustela_putorius_furo
ENSFDAG00000003871	GPATCH1	92	82.424	ENSMLUG00000012161	GPATCH1	96	82.294	Myotis_lucifugus
ENSFDAG00000003871	GPATCH1	100	81.461	ENSNGAG00000012455	Gpatch1	89	81.863	Nannospalax_galili
ENSFDAG00000003871	GPATCH1	100	81.980	ENSNLEG00000007659	GPATCH1	96	82.536	Nomascus_leucogenys
ENSFDAG00000003871	GPATCH1	74	69.559	ENSMEUG00000015174	GPATCH1	70	69.559	Notamacropus_eugenii
ENSFDAG00000003871	GPATCH1	100	83.185	ENSODEG00000007103	GPATCH1	97	83.408	Octodon_degus
ENSFDAG00000003871	GPATCH1	82	54.339	ENSONIG00000003302	gpatch1	88	50.176	Oreochromis_niloticus
ENSFDAG00000003871	GPATCH1	100	69.454	ENSOANG00000012732	GPATCH1	96	69.231	Ornithorhynchus_anatinus
ENSFDAG00000003871	GPATCH1	100	82.759	ENSOCUG00000015905	GPATCH1	96	82.832	Oryctolagus_cuniculus
ENSFDAG00000003871	GPATCH1	90	50.792	ENSORLG00000018706	gpatch1	85	49.939	Oryzias_latipes
ENSFDAG00000003871	GPATCH1	90	50.060	ENSOMEG00000022688	gpatch1	87	51.501	Oryzias_melastigma
ENSFDAG00000003871	GPATCH1	85	84.334	ENSOGAG00000004016	GPATCH1	93	86.376	Otolemur_garnettii
ENSFDAG00000003871	GPATCH1	92	83.131	ENSOARG00000004365	GPATCH1	96	82.405	Ovis_aries
ENSFDAG00000003871	GPATCH1	100	82.202	ENSPPAG00000020990	GPATCH1	96	82.870	Pan_paniscus
ENSFDAG00000003871	GPATCH1	100	82.405	ENSPPRG00000017245	GPATCH1	96	82.405	Panthera_pardus
ENSFDAG00000003871	GPATCH1	100	83.073	ENSPTIG00000019649	GPATCH1	96	83.073	Panthera_tigris_altaica
ENSFDAG00000003871	GPATCH1	100	82.020	ENSPTRG00000010803	GPATCH1	96	82.647	Pan_troglodytes
ENSFDAG00000003871	GPATCH1	92	82.930	ENSPANG00000012374	GPATCH1	93	82.809	Papio_anubis
ENSFDAG00000003871	GPATCH1	82	55.013	ENSPKIG00000020745	gpatch1	75	55.145	Paramormyrops_kingsleyae
ENSFDAG00000003871	GPATCH1	92	61.814	ENSPSIG00000013433	GPATCH1	88	62.726	Pelodiscus_sinensis
ENSFDAG00000003871	GPATCH1	100	79.822	ENSPEMG00000000636	Gpatch1	96	79.822	Peromyscus_maniculatus_bairdii
ENSFDAG00000003871	GPATCH1	92	71.792	ENSPCIG00000021003	GPATCH1	95	71.913	Phascolarctos_cinereus
ENSFDAG00000003871	GPATCH1	71	48.830	ENSPREG00000008264	gpatch1	93	43.980	Poecilia_reticulata
ENSFDAG00000003871	GPATCH1	100	79.467	ENSPPYG00000009824	GPATCH1	96	79.867	Pongo_abelii
ENSFDAG00000003871	GPATCH1	78	79.286	ENSPCAG00000005931	GPATCH1	84	79.725	Procavia_capensis
ENSFDAG00000003871	GPATCH1	91	78.650	ENSPCOG00000009674	GPATCH1	93	78.352	Propithecus_coquereli
ENSFDAG00000003871	GPATCH1	91	83.714	ENSPVAG00000017767	GPATCH1	87	84.762	Pteropus_vampyrus
ENSFDAG00000003871	GPATCH1	82	54.533	ENSPNYG00000018189	gpatch1	86	54.267	Pundamilia_nyererei
ENSFDAG00000003871	GPATCH1	91	50.960	ENSPNAG00000013187	gpatch1	79	53.856	Pygocentrus_nattereri
ENSFDAG00000003871	GPATCH1	100	80.936	ENSRNOG00000011584	Gpatch1	96	80.936	Rattus_norvegicus
ENSFDAG00000003871	GPATCH1	92	78.744	ENSRBIG00000034723	GPATCH1	85	80.876	Rhinopithecus_bieti
ENSFDAG00000003871	GPATCH1	100	81.758	ENSRROG00000024428	GPATCH1	96	82.425	Rhinopithecus_roxellana
ENSFDAG00000003871	GPATCH1	92	82.930	ENSSBOG00000034650	GPATCH1	96	82.314	Saimiri_boliviensis_boliviensis
ENSFDAG00000003871	GPATCH1	100	70.374	ENSSHAG00000016016	GPATCH1	96	70.667	Sarcophilus_harrisii
ENSFDAG00000003871	GPATCH1	82	55.274	ENSSFOG00015011535	gpatch1	86	54.293	Scleropages_formosus
ENSFDAG00000003871	GPATCH1	82	49.362	ENSSMAG00000002883	gpatch1	90	47.309	Scophthalmus_maximus
ENSFDAG00000003871	GPATCH1	82	52.645	ENSSDUG00000007444	gpatch1	87	49.943	Seriola_dumerili
ENSFDAG00000003871	GPATCH1	82	53.590	ENSSLDG00000002856	gpatch1	85	53.723	Seriola_lalandi_dorsalis
ENSFDAG00000003871	GPATCH1	73	81.538	ENSSARG00000004108	GPATCH1	70	81.538	Sorex_araneus
ENSFDAG00000003871	GPATCH1	92	82.888	ENSSSCG00000002865	GPATCH1	91	82.646	Sus_scrofa
ENSFDAG00000003871	GPATCH1	100	62.876	ENSTGUG00000009401	GPATCH1	88	63.916	Taeniopygia_guttata
ENSFDAG00000003871	GPATCH1	82	52.524	ENSTRUG00000025081	gpatch1	87	50.548	Takifugu_rubripes
ENSFDAG00000003871	GPATCH1	82	52.524	ENSTRUG00000005785	-	87	50.548	Takifugu_rubripes
ENSFDAG00000003871	GPATCH1	82	53.067	ENSTNIG00000002554	gpatch1	93	53.662	Tetraodon_nigroviridis
ENSFDAG00000003871	GPATCH1	66	71.921	ENSTBEG00000007750	-	83	71.921	Tupaia_belangeri
ENSFDAG00000003871	GPATCH1	92	75.061	ENSTTRG00000012221	GPATCH1	96	75.222	Tursiops_truncatus
ENSFDAG00000003871	GPATCH1	91	82.582	ENSUMAG00000014645	GPATCH1	99	81.182	Ursus_maritimus
ENSFDAG00000003871	GPATCH1	79	96.667	ENSVPAG00000010313	GPATCH1	83	95.597	Vicugna_pacos
ENSFDAG00000003871	GPATCH1	94	82.686	ENSVVUG00000016572	GPATCH1	89	83.051	Vulpes_vulpes
ENSFDAG00000003871	GPATCH1	98	49.390	ENSXETG00000018276	gpatch1	84	57.879	Xenopus_tropicalis