EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000004463 (Gene tree)
Gene ID: 104862119
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 53276 bases
Position: chrKN122100.1:2330038-2383313
Accession: 104862119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000016155	RNA_pol_L_2	PF13656.6	1.7e-28	1	1
ENSFDAP00000016155	RNA_pol_L	PF01193.24	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000006964	POLR1D-202	574	XM_010623838	ENSFDAP00000016155	133 (aa)	XP_010622140	UPI00053FEDB5
ENSFDAT00000006953	POLR1D-201	997	-	ENSFDAP00000016143	122 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000004463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000004463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000004463	POLR1D	80	33.019	ENSFDAG00000010507	-	88	33.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000004463	POLR1D	100	96.992	ENSG00000186184	POLR1D	100	96.992	Homo_sapiens
ENSFDAG00000004463	POLR1D	83	63.964	ENSAPOG00000021882	polr1d	94	68.000	Acanthochromis_polyacanthus
ENSFDAG00000004463	POLR1D	94	95.200	ENSAMEG00000019095	POLR1D	100	95.200	Ailuropoda_melanoleuca
ENSFDAG00000004463	POLR1D	80	71.296	ENSACIG00000013328	polr1d	94	71.296	Amphilophus_citrinellus
ENSFDAG00000004463	POLR1D	84	66.071	ENSAOCG00000018500	polr1d	98	66.071	Amphiprion_ocellaris
ENSFDAG00000004463	POLR1D	84	65.179	ENSAPEG00000009489	polr1d	98	65.179	Amphiprion_percula
ENSFDAG00000004463	POLR1D	80	66.355	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSFDAG00000004463	POLR1D	83	64.865	ENSACAG00000015753	POLR1D	96	64.865	Anolis_carolinensis
ENSFDAG00000004463	POLR1D	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSFDAG00000004463	POLR1D	80	70.093	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSFDAG00000004463	POLR1D	80	66.981	ENSAMXG00000036118	polr1d	92	66.981	Astyanax_mexicanus
ENSFDAG00000004463	POLR1D	100	92.481	ENSBTAG00000033252	-	100	92.481	Bos_taurus
ENSFDAG00000004463	POLR1D	100	92.481	ENSBTAG00000008642	POLR1D	100	92.481	Bos_taurus
ENSFDAG00000004463	POLR1D	62	36.585	WBGene00010230	rpac-19	57	36.585	Caenorhabditis_elegans
ENSFDAG00000004463	POLR1D	100	96.241	ENSCJAG00000044669	POLR1D	100	96.241	Callithrix_jacchus
ENSFDAG00000004463	POLR1D	100	95.489	ENSCAFG00000006755	POLR1D	100	95.489	Canis_familiaris
ENSFDAG00000004463	POLR1D	100	93.233	ENSCHIG00000021910	POLR1D	100	93.233	Capra_hircus
ENSFDAG00000004463	POLR1D	93	91.129	ENSTSYG00000026817	-	93	91.129	Carlito_syrichta
ENSFDAG00000004463	POLR1D	96	81.538	ENSTSYG00000034852	-	98	81.513	Carlito_syrichta
ENSFDAG00000004463	POLR1D	96	56.250	ENSCAPG00000006058	-	99	56.250	Cavia_aperea
ENSFDAG00000004463	POLR1D	96	57.031	ENSCPOG00000030450	-	99	57.031	Cavia_porcellus
ENSFDAG00000004463	POLR1D	100	75.940	ENSCCAG00000020191	-	100	75.940	Cebus_capucinus
ENSFDAG00000004463	POLR1D	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSFDAG00000004463	POLR1D	100	84.962	ENSCATG00000022900	-	100	84.962	Cercocebus_atys
ENSFDAG00000004463	POLR1D	100	95.489	ENSCATG00000030710	-	100	95.489	Cercocebus_atys
ENSFDAG00000004463	POLR1D	93	96.774	ENSCLAG00000017623	POLR1D	100	96.774	Chinchilla_lanigera
ENSFDAG00000004463	POLR1D	73	77.320	ENSCPBG00000004719	POLR1D	96	77.320	Chrysemys_picta_bellii
ENSFDAG00000004463	POLR1D	100	92.481	ENSCANG00000037694	-	100	92.481	Colobus_angolensis_palliatus
ENSFDAG00000004463	POLR1D	100	95.489	ENSCANG00000028632	-	100	95.489	Colobus_angolensis_palliatus
ENSFDAG00000004463	POLR1D	100	93.985	ENSCGRG00001021251	Polr1d	100	93.985	Cricetulus_griseus_chok1gshd
ENSFDAG00000004463	POLR1D	100	93.985	ENSCGRG00000011639	Polr1d	100	93.985	Cricetulus_griseus_crigri
ENSFDAG00000004463	POLR1D	78	68.269	ENSCSEG00000018268	polr1d	91	68.224	Cynoglossus_semilaevis
ENSFDAG00000004463	POLR1D	79	70.476	ENSCVAG00000018527	polr1d	92	70.476	Cyprinodon_variegatus
ENSFDAG00000004463	POLR1D	83	65.455	ENSDARG00000037570	polr1d	98	65.455	Danio_rerio
ENSFDAG00000004463	POLR1D	100	91.045	ENSDNOG00000046247	-	100	91.045	Dasypus_novemcinctus
ENSFDAG00000004463	POLR1D	100	93.233	ENSDNOG00000043676	-	100	93.233	Dasypus_novemcinctus
ENSFDAG00000004463	POLR1D	100	93.233	ENSDORG00000029155	Polr1d	100	93.233	Dipodomys_ordii
ENSFDAG00000004463	POLR1D	65	44.186	FBgn0086447	l(2)37Cg	81	44.186	Drosophila_melanogaster
ENSFDAG00000004463	POLR1D	93	91.935	ENSETEG00000012797	POLR1D	100	91.935	Echinops_telfairi
ENSFDAG00000004463	POLR1D	65	73.256	ENSEBUG00000011748	polr1d	60	73.256	Eptatretus_burgeri
ENSFDAG00000004463	POLR1D	96	95.312	ENSEASG00005022487	POLR1D	99	95.312	Equus_asinus_asinus
ENSFDAG00000004463	POLR1D	93	93.548	ENSEEUG00000013144	POLR1D	100	93.548	Erinaceus_europaeus
ENSFDAG00000004463	POLR1D	80	66.981	ENSELUG00000005105	rpac2	93	66.981	Esox_lucius
ENSFDAG00000004463	POLR1D	100	96.241	ENSFCAG00000030162	POLR1D	100	96.241	Felis_catus
ENSFDAG00000004463	POLR1D	72	73.958	ENSFALG00000011463	POLR1D	95	73.958	Ficedula_albicollis
ENSFDAG00000004463	POLR1D	80	73.148	ENSFHEG00000015410	polr1d	94	73.148	Fundulus_heteroclitus
ENSFDAG00000004463	POLR1D	79	71.429	ENSGAFG00000001693	polr1d	92	71.429	Gambusia_affinis
ENSFDAG00000004463	POLR1D	88	67.797	ENSGACG00000018585	polr1d	100	67.797	Gasterosteus_aculeatus
ENSFDAG00000004463	POLR1D	80	77.358	ENSGAGG00000008503	POLR1D	93	77.358	Gopherus_agassizii
ENSFDAG00000004463	POLR1D	100	96.992	ENSGGOG00000004235	POLR1D	100	96.992	Gorilla_gorilla
ENSFDAG00000004463	POLR1D	80	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSFDAG00000004463	POLR1D	100	98.496	ENSHGLG00000003202	POLR1D	100	98.496	Heterocephalus_glaber_female
ENSFDAG00000004463	POLR1D	100	98.496	ENSHGLG00100009393	POLR1D	100	98.496	Heterocephalus_glaber_male
ENSFDAG00000004463	POLR1D	80	67.290	ENSHCOG00000003258	polr1d	94	67.290	Hippocampus_comes
ENSFDAG00000004463	POLR1D	82	70.642	ENSIPUG00000014810	polr1d	95	70.642	Ictalurus_punctatus
ENSFDAG00000004463	POLR1D	100	96.241	ENSSTOG00000013877	POLR1D	100	96.241	Ictidomys_tridecemlineatus
ENSFDAG00000004463	POLR1D	95	73.016	ENSJJAG00000021667	-	75	73.016	Jaculus_jaculus
ENSFDAG00000004463	POLR1D	97	87.218	ENSJJAG00000022671	-	100	90.000	Jaculus_jaculus
ENSFDAG00000004463	POLR1D	80	66.038	ENSKMAG00000015256	polr1d	93	66.038	Kryptolebias_marmoratus
ENSFDAG00000004463	POLR1D	79	69.524	ENSLBEG00000015919	polr1d	92	69.524	Labrus_bergylta
ENSFDAG00000004463	POLR1D	87	64.655	ENSLACG00000006810	POLR1D	96	64.655	Latimeria_chalumnae
ENSFDAG00000004463	POLR1D	54	78.378	ENSLOCG00000014976	polr1d	100	78.378	Lepisosteus_oculatus
ENSFDAG00000004463	POLR1D	100	87.218	ENSLAFG00000032290	POLR1D	100	87.218	Loxodonta_africana
ENSFDAG00000004463	POLR1D	94	95.200	ENSMFAG00000045264	POLR1D	97	95.200	Macaca_fascicularis
ENSFDAG00000004463	POLR1D	100	76.692	ENSMMUG00000041570	-	100	76.692	Macaca_mulatta
ENSFDAG00000004463	POLR1D	87	95.690	ENSMMUG00000020386	POLR1D	100	95.690	Macaca_mulatta
ENSFDAG00000004463	POLR1D	100	96.241	ENSMNEG00000008630	-	100	96.241	Macaca_nemestrina
ENSFDAG00000004463	POLR1D	100	79.699	ENSMNEG00000038120	-	100	79.699	Macaca_nemestrina
ENSFDAG00000004463	POLR1D	100	96.241	ENSMLEG00000041048	-	100	96.241	Mandrillus_leucophaeus
ENSFDAG00000004463	POLR1D	100	85.714	ENSMLEG00000032251	-	100	85.714	Mandrillus_leucophaeus
ENSFDAG00000004463	POLR1D	76	69.307	ENSMAMG00000014834	polr1d	94	69.307	Mastacembelus_armatus
ENSFDAG00000004463	POLR1D	77	72.549	ENSMZEG00005006638	polr1d	90	72.549	Maylandia_zebra
ENSFDAG00000004463	POLR1D	69	76.087	ENSMGAG00000005322	POLR1D	84	76.087	Meleagris_gallopavo
ENSFDAG00000004463	POLR1D	100	93.233	ENSMAUG00000001946	Polr1d	100	93.233	Mesocricetus_auratus
ENSFDAG00000004463	POLR1D	100	96.241	ENSMICG00000016883	-	100	96.241	Microcebus_murinus
ENSFDAG00000004463	POLR1D	99	78.788	ENSMICG00000007349	-	100	78.788	Microcebus_murinus
ENSFDAG00000004463	POLR1D	99	94.697	ENSMOCG00000021288	Polr1d	99	94.697	Microtus_ochrogaster
ENSFDAG00000004463	POLR1D	80	67.290	ENSMMOG00000009605	polr1d	94	67.290	Mola_mola
ENSFDAG00000004463	POLR1D	80	82.075	ENSMODG00000023881	POLR1D	93	82.075	Monodelphis_domestica
ENSFDAG00000004463	POLR1D	78	67.308	ENSMALG00000010652	polr1d	91	67.308	Monopterus_albus
ENSFDAG00000004463	POLR1D	100	89.474	MGP_CAROLIEiJ_G0028034	Polr1d	100	89.474	Mus_caroli
ENSFDAG00000004463	POLR1D	100	89.474	ENSMUSG00000029642	Polr1d	100	89.474	Mus_musculus
ENSFDAG00000004463	POLR1D	100	88.722	MGP_PahariEiJ_G0024600	Polr1d	100	88.722	Mus_pahari
ENSFDAG00000004463	POLR1D	100	90.226	MGP_SPRETEiJ_G0029032	Polr1d	100	90.226	Mus_spretus
ENSFDAG00000004463	POLR1D	99	84.848	ENSMLUG00000004118	-	99	84.848	Myotis_lucifugus
ENSFDAG00000004463	POLR1D	100	93.233	ENSMLUG00000027169	-	100	93.233	Myotis_lucifugus
ENSFDAG00000004463	POLR1D	87	93.103	ENSNGAG00000006014	Polr1d	100	93.103	Nannospalax_galili
ENSFDAG00000004463	POLR1D	80	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSFDAG00000004463	POLR1D	100	96.992	ENSNLEG00000000358	POLR1D	100	96.992	Nomascus_leucogenys
ENSFDAG00000004463	POLR1D	100	81.203	ENSODEG00000014801	-	100	81.203	Octodon_degus
ENSFDAG00000004463	POLR1D	100	95.489	ENSODEG00000005294	-	100	95.489	Octodon_degus
ENSFDAG00000004463	POLR1D	79	80.000	ENSOANG00000008708	-	97	80.000	Ornithorhynchus_anatinus
ENSFDAG00000004463	POLR1D	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSFDAG00000004463	POLR1D	80	69.811	ENSORLG00000010257	polr1d	93	69.811	Oryzias_latipes
ENSFDAG00000004463	POLR1D	83	67.568	ENSORLG00020000533	polr1d	75	67.568	Oryzias_latipes_hni
ENSFDAG00000004463	POLR1D	85	68.142	ENSORLG00015013267	polr1d	75	68.142	Oryzias_latipes_hsok
ENSFDAG00000004463	POLR1D	91	64.463	ENSOMEG00000014912	polr1d	81	64.463	Oryzias_melastigma
ENSFDAG00000004463	POLR1D	100	95.489	ENSOGAG00000014601	POLR1D	100	95.489	Otolemur_garnettii
ENSFDAG00000004463	POLR1D	94	92.800	ENSOARG00000017005	POLR1D	96	92.800	Ovis_aries
ENSFDAG00000004463	POLR1D	100	95.489	ENSPPAG00000028138	POLR1D	100	95.489	Pan_paniscus
ENSFDAG00000004463	POLR1D	99	96.212	ENSPPRG00000003381	POLR1D	99	96.212	Panthera_pardus
ENSFDAG00000004463	POLR1D	93	95.968	ENSPTIG00000018137	POLR1D	93	95.968	Panthera_tigris_altaica
ENSFDAG00000004463	POLR1D	100	96.992	ENSPTRG00000005734	POLR1D	100	96.992	Pan_troglodytes
ENSFDAG00000004463	POLR1D	100	84.962	ENSPANG00000035051	-	100	84.962	Papio_anubis
ENSFDAG00000004463	POLR1D	100	96.241	ENSPANG00000020259	-	100	96.241	Papio_anubis
ENSFDAG00000004463	POLR1D	86	60.870	ENSPKIG00000021891	polr1d	90	51.754	Paramormyrops_kingsleyae
ENSFDAG00000004463	POLR1D	87	71.795	ENSPSIG00000011822	POLR1D	91	71.795	Pelodiscus_sinensis
ENSFDAG00000004463	POLR1D	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSFDAG00000004463	POLR1D	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSFDAG00000004463	POLR1D	100	90.226	ENSPEMG00000006336	-	100	90.226	Peromyscus_maniculatus_bairdii
ENSFDAG00000004463	POLR1D	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSFDAG00000004463	POLR1D	80	82.075	ENSPCIG00000001673	POLR1D	93	82.075	Phascolarctos_cinereus
ENSFDAG00000004463	POLR1D	79	71.429	ENSPFOG00000023343	polr1d	92	72.500	Poecilia_formosa
ENSFDAG00000004463	POLR1D	79	71.429	ENSPLAG00000009675	polr1d	92	71.429	Poecilia_latipinna
ENSFDAG00000004463	POLR1D	79	71.429	ENSPMEG00000004628	polr1d	92	71.429	Poecilia_mexicana
ENSFDAG00000004463	POLR1D	79	71.429	ENSPREG00000022032	polr1d	92	71.429	Poecilia_reticulata
ENSFDAG00000004463	POLR1D	100	94.737	ENSPCOG00000028175	POLR1D	100	94.737	Propithecus_coquereli
ENSFDAG00000004463	POLR1D	80	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSFDAG00000004463	POLR1D	76	66.337	ENSPNAG00000001512	polr1d	87	65.385	Pygocentrus_nattereri
ENSFDAG00000004463	POLR1D	100	96.241	ENSRBIG00000036378	-	100	96.241	Rhinopithecus_bieti
ENSFDAG00000004463	POLR1D	100	92.481	ENSRBIG00000000336	-	100	92.481	Rhinopithecus_bieti
ENSFDAG00000004463	POLR1D	100	96.241	ENSRROG00000042232	-	100	96.241	Rhinopithecus_roxellana
ENSFDAG00000004463	POLR1D	100	92.481	ENSRROG00000026751	-	100	92.481	Rhinopithecus_roxellana
ENSFDAG00000004463	POLR1D	89	46.218	YNL113W	RPC19	84	46.218	Saccharomyces_cerevisiae
ENSFDAG00000004463	POLR1D	86	90.351	ENSSBOG00000030146	-	84	90.351	Saimiri_boliviensis_boliviensis
ENSFDAG00000004463	POLR1D	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSFDAG00000004463	POLR1D	86	75.439	ENSSHAG00000001190	POLR1D	88	75.439	Sarcophilus_harrisii
ENSFDAG00000004463	POLR1D	82	70.642	ENSSFOG00015011375	polr1d	96	70.642	Scleropages_formosus
ENSFDAG00000004463	POLR1D	80	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSFDAG00000004463	POLR1D	80	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSFDAG00000004463	POLR1D	86	61.739	ENSSLDG00000023871	polr1d	97	61.739	Seriola_lalandi_dorsalis
ENSFDAG00000004463	POLR1D	100	93.985	ENSSARG00000007840	POLR1D	100	93.985	Sorex_araneus
ENSFDAG00000004463	POLR1D	79	74.286	ENSSPUG00000005786	POLR1D	95	71.171	Sphenodon_punctatus
ENSFDAG00000004463	POLR1D	79	71.429	ENSSPAG00000011764	polr1d	92	71.429	Stegastes_partitus
ENSFDAG00000004463	POLR1D	100	93.233	ENSSSCG00000009310	POLR1D	100	93.233	Sus_scrofa
ENSFDAG00000004463	POLR1D	72	73.958	ENSTGUG00000005450	POLR1D	100	73.958	Taeniopygia_guttata
ENSFDAG00000004463	POLR1D	78	66.346	ENSTRUG00000019741	polr1d	91	66.346	Takifugu_rubripes
ENSFDAG00000004463	POLR1D	93	94.355	ENSTBEG00000007006	POLR1D	100	94.355	Tupaia_belangeri
ENSFDAG00000004463	POLR1D	100	95.489	ENSUAMG00000011413	POLR1D	100	95.489	Ursus_americanus
ENSFDAG00000004463	POLR1D	93	95.161	ENSUMAG00000016968	POLR1D	97	95.161	Ursus_maritimus
ENSFDAG00000004463	POLR1D	100	95.489	ENSVVUG00000009216	POLR1D	100	95.489	Vulpes_vulpes
ENSFDAG00000004463	POLR1D	74	73.469	ENSXCOG00000011731	polr1d	75	73.469	Xiphophorus_couchianus
ENSFDAG00000004463	POLR1D	74	73.469	ENSXMAG00000017538	polr1d	75	73.469	Xiphophorus_maculatus