EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000005128 (Gene tree)
Gene ID: 104868296
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 22719 bases
Position: chrKN122588.1:599502-622220
Accession: 104868296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000016509	CPSF_A	PF03178.15	4.5e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000007751	DDB1-201	3769	XM_010633008	ENSFDAP00000016509	1140 (aa)	XP_010631310	UPI00054009EA

Gene Model

Click here to download ENSFDAG00000005128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000005128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000005128	DDB1	100	99.123	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSFDAG00000005128	DDB1	98	91.375	ENSAPOG00000005036	ddb1	99	91.327	Acanthochromis_polyacanthus
ENSFDAG00000005128	DDB1	100	99.211	ENSAMEG00000016518	DDB1	100	99.211	Ailuropoda_melanoleuca
ENSFDAG00000005128	DDB1	86	91.633	ENSACIG00000020624	ddb1	99	91.633	Amphilophus_citrinellus
ENSFDAG00000005128	DDB1	100	91.053	ENSAOCG00000003066	ddb1	100	91.053	Amphiprion_ocellaris
ENSFDAG00000005128	DDB1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSFDAG00000005128	DDB1	94	91.535	ENSATEG00000020571	ddb1	97	91.535	Anabas_testudineus
ENSFDAG00000005128	DDB1	98	96.089	ENSAPLG00000007174	DDB1	99	96.089	Anas_platyrhynchos
ENSFDAG00000005128	DDB1	100	96.842	ENSACAG00000017758	DDB1	100	96.842	Anolis_carolinensis
ENSFDAG00000005128	DDB1	100	99.123	ENSANAG00000021878	DDB1	100	99.123	Aotus_nancymaae
ENSFDAG00000005128	DDB1	100	91.404	ENSACLG00000012401	ddb1	100	91.404	Astatotilapia_calliptera
ENSFDAG00000005128	DDB1	100	99.035	ENSBTAG00000021569	DDB1	93	99.035	Bos_taurus
ENSFDAG00000005128	DDB1	100	36.955	WBGene00010890	ddb-1	100	36.869	Caenorhabditis_elegans
ENSFDAG00000005128	DDB1	100	99.123	ENSCJAG00000019319	DDB1	100	99.123	Callithrix_jacchus
ENSFDAG00000005128	DDB1	100	99.211	ENSCAFG00000016264	DDB1	100	99.211	Canis_familiaris
ENSFDAG00000005128	DDB1	94	98.977	ENSCAFG00020012722	DDB1	99	98.977	Canis_lupus_dingo
ENSFDAG00000005128	DDB1	100	99.035	ENSCHIG00000014969	DDB1	100	99.035	Capra_hircus
ENSFDAG00000005128	DDB1	100	98.947	ENSTSYG00000008027	DDB1	100	98.947	Carlito_syrichta
ENSFDAG00000005128	DDB1	98	99.196	ENSCAPG00000010786	DDB1	100	99.196	Cavia_aperea
ENSFDAG00000005128	DDB1	100	99.211	ENSCPOG00000009956	DDB1	100	99.211	Cavia_porcellus
ENSFDAG00000005128	DDB1	100	99.123	ENSCCAG00000035883	DDB1	100	99.123	Cebus_capucinus
ENSFDAG00000005128	DDB1	100	96.615	ENSCATG00000044495	DDB1	100	96.615	Cercocebus_atys
ENSFDAG00000005128	DDB1	100	99.386	ENSCLAG00000004126	DDB1	100	99.386	Chinchilla_lanigera
ENSFDAG00000005128	DDB1	100	99.123	ENSCSAG00000006392	DDB1	100	99.123	Chlorocebus_sabaeus
ENSFDAG00000005128	DDB1	88	92.424	ENSCHOG00000011377	DDB1	90	92.424	Choloepus_hoffmanni
ENSFDAG00000005128	DDB1	100	97.456	ENSCPBG00000017728	DDB1	100	97.456	Chrysemys_picta_bellii
ENSFDAG00000005128	DDB1	100	61.892	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSFDAG00000005128	DDB1	94	60.369	ENSCSAVG00000004783	-	100	60.369	Ciona_savignyi
ENSFDAG00000005128	DDB1	100	99.123	ENSCANG00000019948	DDB1	100	99.123	Colobus_angolensis_palliatus
ENSFDAG00000005128	DDB1	100	99.298	ENSCGRG00001016599	Ddb1	100	99.298	Cricetulus_griseus_chok1gshd
ENSFDAG00000005128	DDB1	100	99.298	ENSCGRG00000013427	Ddb1	100	99.298	Cricetulus_griseus_crigri
ENSFDAG00000005128	DDB1	93	91.046	ENSCSEG00000012499	ddb1	99	89.474	Cynoglossus_semilaevis
ENSFDAG00000005128	DDB1	94	91.240	ENSCVAG00000019531	ddb1	99	91.240	Cyprinodon_variegatus
ENSFDAG00000005128	DDB1	100	88.616	ENSDARG00000074431	ddb1	100	88.616	Danio_rerio
ENSFDAG00000005128	DDB1	94	98.884	ENSDNOG00000014884	DDB1	97	98.884	Dasypus_novemcinctus
ENSFDAG00000005128	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSFDAG00000005128	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSFDAG00000005128	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSFDAG00000005128	DDB1	78	84.702	ENSEBUG00000014593	ddb1	97	84.702	Eptatretus_burgeri
ENSFDAG00000005128	DDB1	100	99.035	ENSEASG00005008184	DDB1	100	99.035	Equus_asinus_asinus
ENSFDAG00000005128	DDB1	100	98.947	ENSECAG00000012136	DDB1	100	98.947	Equus_caballus
ENSFDAG00000005128	DDB1	85	96.801	ENSEEUG00000003194	DDB1	85	96.801	Erinaceus_europaeus
ENSFDAG00000005128	DDB1	100	91.140	ENSELUG00000023868	ddb1	100	91.140	Esox_lucius
ENSFDAG00000005128	DDB1	100	99.211	ENSFCAG00000029716	DDB1	100	99.211	Felis_catus
ENSFDAG00000005128	DDB1	100	96.500	ENSFALG00000011981	DDB1	100	96.500	Ficedula_albicollis
ENSFDAG00000005128	DDB1	90	91.373	ENSFHEG00000022133	ddb1	98	91.373	Fundulus_heteroclitus
ENSFDAG00000005128	DDB1	79	94.983	ENSGMOG00000019386	ddb1	94	94.983	Gadus_morhua
ENSFDAG00000005128	DDB1	100	96.667	ENSGALG00000042333	DDB1	100	96.667	Gallus_gallus
ENSFDAG00000005128	DDB1	94	91.053	ENSGAFG00000013142	ddb1	99	91.053	Gambusia_affinis
ENSFDAG00000005128	DDB1	96	90.376	ENSGACG00000017182	ddb1	100	90.376	Gasterosteus_aculeatus
ENSFDAG00000005128	DDB1	95	97.325	ENSGAGG00000014124	DDB1	100	97.325	Gopherus_agassizii
ENSFDAG00000005128	DDB1	100	99.123	ENSGGOG00000004052	DDB1	100	99.123	Gorilla_gorilla
ENSFDAG00000005128	DDB1	100	91.404	ENSHBUG00000008873	ddb1	100	91.404	Haplochromis_burtoni
ENSFDAG00000005128	DDB1	100	99.386	ENSHGLG00000018430	DDB1	100	99.386	Heterocephalus_glaber_female
ENSFDAG00000005128	DDB1	100	98.333	ENSHGLG00100014475	DDB1	100	98.333	Heterocephalus_glaber_male
ENSFDAG00000005128	DDB1	94	90.799	ENSHCOG00000018670	ddb1	98	90.799	Hippocampus_comes
ENSFDAG00000005128	DDB1	100	90.702	ENSIPUG00000005612	DDB1	100	90.702	Ictalurus_punctatus
ENSFDAG00000005128	DDB1	100	99.123	ENSSTOG00000007552	DDB1	100	99.123	Ictidomys_tridecemlineatus
ENSFDAG00000005128	DDB1	100	98.947	ENSJJAG00000017769	Ddb1	100	98.947	Jaculus_jaculus
ENSFDAG00000005128	DDB1	94	91.146	ENSKMAG00000002315	ddb1	99	91.146	Kryptolebias_marmoratus
ENSFDAG00000005128	DDB1	85	91.295	ENSLBEG00000017065	ddb1	99	91.295	Labrus_bergylta
ENSFDAG00000005128	DDB1	100	93.345	ENSLACG00000017611	DDB1	100	93.345	Latimeria_chalumnae
ENSFDAG00000005128	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSFDAG00000005128	DDB1	100	98.947	ENSLAFG00000011513	DDB1	100	98.947	Loxodonta_africana
ENSFDAG00000005128	DDB1	100	99.123	ENSMFAG00000042035	DDB1	100	99.123	Macaca_fascicularis
ENSFDAG00000005128	DDB1	99	99.116	ENSMMUG00000002691	DDB1	99	99.116	Macaca_mulatta
ENSFDAG00000005128	DDB1	100	99.123	ENSMNEG00000031559	DDB1	100	99.123	Macaca_nemestrina
ENSFDAG00000005128	DDB1	100	99.123	ENSMLEG00000044136	DDB1	100	99.123	Mandrillus_leucophaeus
ENSFDAG00000005128	DDB1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSFDAG00000005128	DDB1	100	91.316	ENSMZEG00005013835	ddb1	100	91.316	Maylandia_zebra
ENSFDAG00000005128	DDB1	94	95.996	ENSMGAG00000004990	DDB1	100	95.996	Meleagris_gallopavo
ENSFDAG00000005128	DDB1	100	99.298	ENSMAUG00000012926	Ddb1	100	99.298	Mesocricetus_auratus
ENSFDAG00000005128	DDB1	100	99.123	ENSMICG00000013703	DDB1	100	99.123	Microcebus_murinus
ENSFDAG00000005128	DDB1	100	99.035	ENSMOCG00000020499	Ddb1	100	99.035	Microtus_ochrogaster
ENSFDAG00000005128	DDB1	86	91.429	ENSMMOG00000001758	ddb1	99	91.429	Mola_mola
ENSFDAG00000005128	DDB1	100	88.841	ENSMODG00000020353	DDB1	100	88.841	Monodelphis_domestica
ENSFDAG00000005128	DDB1	100	91.404	ENSMALG00000014071	ddb1	100	91.404	Monopterus_albus
ENSFDAG00000005128	DDB1	100	99.211	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.211	Mus_caroli
ENSFDAG00000005128	DDB1	100	99.035	ENSMUSG00000024740	Ddb1	100	99.035	Mus_musculus
ENSFDAG00000005128	DDB1	100	99.211	MGP_PahariEiJ_G0014189	Ddb1	100	99.211	Mus_pahari
ENSFDAG00000005128	DDB1	100	99.123	MGP_SPRETEiJ_G0023609	Ddb1	100	99.123	Mus_spretus
ENSFDAG00000005128	DDB1	100	95.877	ENSMPUG00000014200	DDB1	100	95.877	Mustela_putorius_furo
ENSFDAG00000005128	DDB1	100	98.947	ENSMLUG00000013232	DDB1	100	98.947	Myotis_lucifugus
ENSFDAG00000005128	DDB1	100	99.123	ENSNGAG00000009384	Ddb1	100	99.123	Nannospalax_galili
ENSFDAG00000005128	DDB1	100	91.491	ENSNBRG00000019581	ddb1	100	91.491	Neolamprologus_brichardi
ENSFDAG00000005128	DDB1	100	96.007	ENSNLEG00000002022	DDB1	100	96.007	Nomascus_leucogenys
ENSFDAG00000005128	DDB1	90	99.648	ENSMEUG00000001099	DDB1	92	99.648	Notamacropus_eugenii
ENSFDAG00000005128	DDB1	90	90.398	ENSOPRG00000008254	DDB1	90	90.398	Ochotona_princeps
ENSFDAG00000005128	DDB1	100	99.035	ENSODEG00000002419	DDB1	100	99.035	Octodon_degus
ENSFDAG00000005128	DDB1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSFDAG00000005128	DDB1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSFDAG00000005128	DDB1	100	99.123	ENSOCUG00000001667	DDB1	100	99.123	Oryctolagus_cuniculus
ENSFDAG00000005128	DDB1	96	89.826	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSFDAG00000005128	DDB1	96	89.734	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSFDAG00000005128	DDB1	94	90.884	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSFDAG00000005128	DDB1	96	89.699	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSFDAG00000005128	DDB1	100	98.947	ENSOGAG00000016103	DDB1	100	98.947	Otolemur_garnettii
ENSFDAG00000005128	DDB1	99	99.020	ENSOARG00000011716	DDB1	98	99.020	Ovis_aries
ENSFDAG00000005128	DDB1	100	99.123	ENSPPAG00000035343	DDB1	100	99.123	Pan_paniscus
ENSFDAG00000005128	DDB1	100	99.211	ENSPPRG00000013300	DDB1	100	99.211	Panthera_pardus
ENSFDAG00000005128	DDB1	98	99.196	ENSPTIG00000006909	DDB1	98	99.196	Panthera_tigris_altaica
ENSFDAG00000005128	DDB1	100	99.123	ENSPTRG00000003737	DDB1	100	99.123	Pan_troglodytes
ENSFDAG00000005128	DDB1	100	99.123	ENSPANG00000000242	DDB1	100	99.123	Papio_anubis
ENSFDAG00000005128	DDB1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSFDAG00000005128	DDB1	98	96.619	ENSPSIG00000013275	DDB1	100	96.619	Pelodiscus_sinensis
ENSFDAG00000005128	DDB1	86	91.327	ENSPMGG00000021179	ddb1	99	91.327	Periophthalmus_magnuspinnatus
ENSFDAG00000005128	DDB1	100	99.298	ENSPEMG00000012241	Ddb1	100	99.298	Peromyscus_maniculatus_bairdii
ENSFDAG00000005128	DDB1	89	86.935	ENSPMAG00000008479	ddb1	100	86.935	Petromyzon_marinus
ENSFDAG00000005128	DDB1	100	98.860	ENSPCIG00000002643	DDB1	100	98.860	Phascolarctos_cinereus
ENSFDAG00000005128	DDB1	100	90.798	ENSPFOG00000002768	ddb1	100	90.798	Poecilia_formosa
ENSFDAG00000005128	DDB1	100	90.614	ENSPLAG00000017227	ddb1	100	90.614	Poecilia_latipinna
ENSFDAG00000005128	DDB1	100	90.614	ENSPMEG00000011398	ddb1	100	90.614	Poecilia_mexicana
ENSFDAG00000005128	DDB1	94	91.163	ENSPREG00000004440	ddb1	98	91.163	Poecilia_reticulata
ENSFDAG00000005128	DDB1	100	94.241	ENSPPYG00000003193	DDB1	100	94.241	Pongo_abelii
ENSFDAG00000005128	DDB1	85	98.955	ENSPCAG00000011040	DDB1	85	98.955	Procavia_capensis
ENSFDAG00000005128	DDB1	100	97.548	ENSPCOG00000015176	DDB1	100	97.548	Propithecus_coquereli
ENSFDAG00000005128	DDB1	100	99.035	ENSPVAG00000003847	DDB1	100	99.035	Pteropus_vampyrus
ENSFDAG00000005128	DDB1	94	91.333	ENSPNAG00000006635	ddb1	97	91.333	Pygocentrus_nattereri
ENSFDAG00000005128	DDB1	100	99.211	ENSRNOG00000020715	Ddb1	100	99.211	Rattus_norvegicus
ENSFDAG00000005128	DDB1	100	99.123	ENSRBIG00000033611	DDB1	100	99.123	Rhinopithecus_bieti
ENSFDAG00000005128	DDB1	100	99.123	ENSRROG00000041407	DDB1	100	99.123	Rhinopithecus_roxellana
ENSFDAG00000005128	DDB1	100	99.211	ENSSBOG00000019775	DDB1	100	99.211	Saimiri_boliviensis_boliviensis
ENSFDAG00000005128	DDB1	94	96.542	ENSSHAG00000011600	DDB1	100	96.542	Sarcophilus_harrisii
ENSFDAG00000005128	DDB1	94	91.357	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSFDAG00000005128	DDB1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSFDAG00000005128	DDB1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSFDAG00000005128	DDB1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSFDAG00000005128	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSFDAG00000005128	DDB1	100	97.368	ENSSPUG00000019338	DDB1	100	97.368	Sphenodon_punctatus
ENSFDAG00000005128	DDB1	94	91.442	ENSSPAG00000009888	ddb1	99	91.442	Stegastes_partitus
ENSFDAG00000005128	DDB1	100	98.158	ENSSSCG00000013094	DDB1	100	98.158	Sus_scrofa
ENSFDAG00000005128	DDB1	100	96.667	ENSTGUG00000006414	DDB1	100	96.667	Taeniopygia_guttata
ENSFDAG00000005128	DDB1	94	90.121	ENSTRUG00000016682	ddb1	98	90.121	Takifugu_rubripes
ENSFDAG00000005128	DDB1	88	84.930	ENSTNIG00000009565	ddb1	99	84.930	Tetraodon_nigroviridis
ENSFDAG00000005128	DDB1	92	94.125	ENSTTRG00000011055	DDB1	94	94.125	Tursiops_truncatus
ENSFDAG00000005128	DDB1	94	98.977	ENSUAMG00000017793	DDB1	93	98.977	Ursus_americanus
ENSFDAG00000005128	DDB1	94	98.977	ENSUMAG00000011788	DDB1	98	98.977	Ursus_maritimus
ENSFDAG00000005128	DDB1	90	99.020	ENSVPAG00000007963	DDB1	92	99.020	Vicugna_pacos
ENSFDAG00000005128	DDB1	100	99.123	ENSVVUG00000004987	DDB1	100	99.123	Vulpes_vulpes
ENSFDAG00000005128	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSFDAG00000005128	DDB1	86	91.122	ENSXCOG00000013956	ddb1	99	91.122	Xiphophorus_couchianus
ENSFDAG00000005128	DDB1	94	91.053	ENSXMAG00000000022	ddb1	99	91.053	Xiphophorus_maculatus