EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000005609 (Gene tree)
Gene ID: 104853830
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 12502 bases
Position: chrKN124857.1:67522-80023
Accession: 104853830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	1	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	2	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	3	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	4	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	5	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	6	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	7	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	8	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	9	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	10	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	11	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	12	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	13	14
ENSFDAP00000016952	zf-C2H2	PF00096.26	1e-63	14	14
ENSFDAP00000016952	zf-met	PF12874.7	2.8e-08	1	3
ENSFDAP00000016952	zf-met	PF12874.7	2.8e-08	2	3
ENSFDAP00000016952	zf-met	PF12874.7	2.8e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000008704	-	3974	XM_010612017	ENSFDAP00000016952	750 (aa)	XP_010610319	-

Gene Model

Click here to download ENSFDAG00000005609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000005609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000005609	-	64	34.708	ENSFDAG00000010005	ZFP64	73	35.000
ENSFDAG00000005609	-	72	84.000	ENSFDAG00000006075	-	100	84.000
ENSFDAG00000005609	-	67	36.275	ENSFDAG00000019359	-	78	36.275
ENSFDAG00000005609	-	99	41.532	ENSFDAG00000016582	ZNF398	90	40.562
ENSFDAG00000005609	-	77	36.735	ENSFDAG00000013867	ZNF646	81	34.862
ENSFDAG00000005609	-	69	42.202	ENSFDAG00000006720	WT1	54	42.202
ENSFDAG00000005609	-	84	53.698	ENSFDAG00000008687	-	97	53.698
ENSFDAG00000005609	-	67	49.289	ENSFDAG00000005159	-	53	49.289
ENSFDAG00000005609	-	66	46.043	ENSFDAG00000021361	PRDM5	79	39.535
ENSFDAG00000005609	-	99	47.018	ENSFDAG00000008114	ZNF81	98	47.018
ENSFDAG00000005609	-	66	38.806	ENSFDAG00000008733	SCRT1	61	38.806
ENSFDAG00000005609	-	54	40.000	ENSFDAG00000008730	OVOL2	73	40.000
ENSFDAG00000005609	-	60	43.333	ENSFDAG00000005614	PATZ1	51	33.735
ENSFDAG00000005609	-	99	54.733	ENSFDAG00000008549	ZNF2	94	54.733
ENSFDAG00000005609	-	66	41.228	ENSFDAG00000005851	SNAI1	54	41.228
ENSFDAG00000005609	-	70	38.406	ENSFDAG00000007103	ZNF236	65	38.406
ENSFDAG00000005609	-	70	36.226	ENSFDAG00000016841	GTF3A	81	36.177
ENSFDAG00000005609	-	52	39.535	ENSFDAG00000010852	-	91	39.535
ENSFDAG00000005609	-	66	42.727	ENSFDAG00000013872	ZIC1	59	42.727
ENSFDAG00000005609	-	67	43.284	ENSFDAG00000019296	-	100	43.284
ENSFDAG00000005609	-	69	30.044	ENSFDAG00000003974	ZNF574	93	30.469
ENSFDAG00000005609	-	60	40.000	ENSFDAG00000016958	SNAI2	53	40.000
ENSFDAG00000005609	-	79	34.542	ENSFDAG00000020159	ZNF319	92	34.542
ENSFDAG00000005609	-	72	34.000	ENSFDAG00000019879	ZNF526	83	34.000
ENSFDAG00000005609	-	66	42.727	ENSFDAG00000014929	ZIC3	60	42.727
ENSFDAG00000005609	-	90	50.272	ENSFDAG00000010369	-	96	50.272
ENSFDAG00000005609	-	99	45.674	ENSFDAG00000015590	ZNF235	99	45.674
ENSFDAG00000005609	-	70	32.258	ENSFDAG00000016560	ZNF521	97	32.258
ENSFDAG00000005609	-	99	41.667	ENSFDAG00000009594	-	96	43.058
ENSFDAG00000005609	-	99	49.024	ENSFDAG00000015190	-	99	49.024
ENSFDAG00000005609	-	99	81.242	ENSFDAG00000020138	-	99	81.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000005609	-	83	70.353	ENSCLAG00000001377	-	100	81.057	Chinchilla_lanigera
ENSFDAG00000005609	-	99	53.036	ENSCGRG00001010752	2610008E11Rik	94	53.036	Cricetulus_griseus_chok1gshd
ENSFDAG00000005609	-	99	53.036	ENSCGRG00000008922	2610008E11Rik	95	53.036	Cricetulus_griseus_crigri
ENSFDAG00000005609	-	91	77.279	ENSHGLG00000001150	-	100	87.079	Heterocephalus_glaber_female
ENSFDAG00000005609	-	91	77.279	ENSHGLG00100009889	-	99	87.483	Heterocephalus_glaber_male
ENSFDAG00000005609	-	98	84.146	ENSHGLG00100005328	-	99	84.146	Heterocephalus_glaber_male
ENSFDAG00000005609	-	99	56.484	ENSMAUG00000007597	2610008E11Rik	98	53.036	Mesocricetus_auratus
ENSFDAG00000005609	-	85	56.823	ENSNGAG00000014809	2610008E11Rik	93	56.823	Nannospalax_galili
ENSFDAG00000005609	-	99	53.157	ENSOCUG00000027634	-	95	52.273	Oryctolagus_cuniculus
ENSFDAG00000005609	-	93	60.526	ENSRNOG00000014331	Zfp810	99	60.526	Rattus_norvegicus