EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000005614 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 17607 bases
Position: chrKN123755.1:5119576-5137182
Accession: 104848087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000016948	zf-C2H2	PF00096.26	9.8e-21	1	4
ENSFDAP00000016948	zf-C2H2	PF00096.26	9.8e-21	2	4
ENSFDAP00000016948	zf-C2H2	PF00096.26	9.8e-21	3	4
ENSFDAP00000016948	zf-C2H2	PF00096.26	9.8e-21	4	4
ENSFDAP00000016923	zf-C2H2	PF00096.26	7.6e-17	1	3
ENSFDAP00000016923	zf-C2H2	PF00096.26	7.6e-17	2	3
ENSFDAP00000016923	zf-C2H2	PF00096.26	7.6e-17	3	3
ENSFDAP00000016948	zf-met	PF12874.7	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000008647	PATZ1-201	1542	-	ENSFDAP00000016923	513 (aa)	-	-
ENSFDAT00000008680	PATZ1-203	309	-	ENSFDAP00000016935	102 (aa)	-	UPI000BACF63F
ENSFDAT00000008699	PATZ1-204	1968	XM_010603822	ENSFDAP00000016948	655 (aa)	XP_010602124	-
ENSFDAT00000008670	PATZ1-202	210	-	ENSFDAP00000016944	70 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000005614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000005614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000005614	PATZ1	84	37.895	ENSFDAG00000011920	-	88	37.895
ENSFDAG00000005614	PATZ1	91	32.530	ENSFDAG00000002593	MYNN	84	32.530
ENSFDAG00000005614	PATZ1	50	43.939	ENSFDAG00000003974	ZNF574	50	33.333
ENSFDAG00000005614	PATZ1	70	30.481	ENSFDAG00000008006	ZBTB16	53	30.481
ENSFDAG00000005614	PATZ1	66	45.238	ENSFDAG00000018237	BCL6B	54	45.238
ENSFDAG00000005614	PATZ1	50	32.283	ENSFDAG00000008687	-	93	40.000
ENSFDAG00000005614	PATZ1	54	30.539	ENSFDAG00000020138	-	64	43.478
ENSFDAG00000005614	PATZ1	51	33.735	ENSFDAG00000005609	-	60	43.333
ENSFDAG00000005614	PATZ1	52	31.481	ENSFDAG00000007103	ZNF236	57	31.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000005614	PATZ1	100	98.051	ENSG00000100105	PATZ1	96	98.051	Homo_sapiens
ENSFDAG00000005614	PATZ1	100	50.498	ENSAPOG00000018447	patz1	97	55.197	Acanthochromis_polyacanthus
ENSFDAG00000005614	PATZ1	100	92.943	ENSAMEG00000007074	PATZ1	96	94.872	Ailuropoda_melanoleuca
ENSFDAG00000005614	PATZ1	100	55.835	ENSACIG00000016779	patz1	96	55.687	Amphilophus_citrinellus
ENSFDAG00000005614	PATZ1	100	54.545	ENSAPEG00000013354	patz1	97	54.401	Amphiprion_percula
ENSFDAG00000005614	PATZ1	100	54.971	ENSATEG00000011260	patz1	97	55.228	Anabas_testudineus
ENSFDAG00000005614	PATZ1	88	87.692	ENSAPLG00000003934	PATZ1	99	86.496	Anas_platyrhynchos
ENSFDAG00000005614	PATZ1	100	98.051	ENSANAG00000029603	PATZ1	96	98.051	Aotus_nancymaae
ENSFDAG00000005614	PATZ1	98	57.996	ENSAMXG00000002273	patz1	96	58.189	Astyanax_mexicanus
ENSFDAG00000005614	PATZ1	100	97.661	ENSBTAG00000005478	PATZ1	96	97.661	Bos_taurus
ENSFDAG00000005614	PATZ1	100	98.051	ENSCJAG00000010978	PATZ1	96	98.051	Callithrix_jacchus
ENSFDAG00000005614	PATZ1	100	92.760	ENSCAFG00000013087	PATZ1	96	95.023	Canis_familiaris
ENSFDAG00000005614	PATZ1	100	94.268	ENSCHIG00000020203	PATZ1	96	94.872	Capra_hircus
ENSFDAG00000005614	PATZ1	99	98.242	ENSTSYG00000033183	PATZ1	95	98.242	Carlito_syrichta
ENSFDAG00000005614	PATZ1	100	98.051	ENSCCAG00000028772	PATZ1	96	98.051	Cebus_capucinus
ENSFDAG00000005614	PATZ1	100	97.856	ENSCATG00000006101	PATZ1	96	97.856	Cercocebus_atys
ENSFDAG00000005614	PATZ1	100	86.576	ENSCPBG00000011277	PATZ1	96	85.671	Chrysemys_picta_bellii
ENSFDAG00000005614	PATZ1	100	97.661	ENSCANG00000024972	PATZ1	96	97.661	Colobus_angolensis_palliatus
ENSFDAG00000005614	PATZ1	100	94.932	ENSCGRG00001004071	Patz1	95	94.932	Cricetulus_griseus_chok1gshd
ENSFDAG00000005614	PATZ1	95	95.943	ENSCGRG00000004814	Patz1	100	95.943	Cricetulus_griseus_crigri
ENSFDAG00000005614	PATZ1	100	52.471	ENSCSEG00000001385	patz1	97	52.450	Cynoglossus_semilaevis
ENSFDAG00000005614	PATZ1	100	56.223	ENSCVAG00000007684	patz1	97	55.685	Cyprinodon_variegatus
ENSFDAG00000005614	PATZ1	99	52.180	ENSDARG00000076584	patz1	96	51.809	Danio_rerio
ENSFDAG00000005614	PATZ1	90	93.613	ENSDNOG00000003183	PATZ1	96	94.286	Dasypus_novemcinctus
ENSFDAG00000005614	PATZ1	100	97.856	ENSDORG00000023834	Patz1	96	97.856	Dipodomys_ordii
ENSFDAG00000005614	PATZ1	100	97.856	ENSECAG00000025030	PATZ1	96	97.856	Equus_caballus
ENSFDAG00000005614	PATZ1	100	51.667	ENSELUG00000002333	patz1	97	57.092	Esox_lucius
ENSFDAG00000005614	PATZ1	100	97.856	ENSFCAG00000030253	PATZ1	96	97.856	Felis_catus
ENSFDAG00000005614	PATZ1	89	87.648	ENSFALG00000007450	PATZ1	99	86.565	Ficedula_albicollis
ENSFDAG00000005614	PATZ1	100	54.124	ENSFHEG00000014755	patz1	96	54.046	Fundulus_heteroclitus
ENSFDAG00000005614	PATZ1	98	52.224	ENSGMOG00000001062	patz1	97	51.408	Gadus_morhua
ENSFDAG00000005614	PATZ1	100	85.202	ENSGALG00000006934	PATZ1	96	84.155	Gallus_gallus
ENSFDAG00000005614	PATZ1	100	51.220	ENSGAFG00000010053	patz1	96	51.220	Gambusia_affinis
ENSFDAG00000005614	PATZ1	88	87.671	ENSGAGG00000003214	PATZ1	100	86.473	Gopherus_agassizii
ENSFDAG00000005614	PATZ1	100	98.246	ENSGGOG00000017171	PATZ1	96	98.246	Gorilla_gorilla
ENSFDAG00000005614	PATZ1	100	51.594	ENSHCOG00000017644	patz1	89	51.304	Hippocampus_comes
ENSFDAG00000005614	PATZ1	99	50.938	ENSIPUG00000017653	patz1	96	50.505	Ictalurus_punctatus
ENSFDAG00000005614	PATZ1	100	97.076	ENSSTOG00000020707	PATZ1	96	97.076	Ictidomys_tridecemlineatus
ENSFDAG00000005614	PATZ1	100	95.962	ENSJJAG00000015259	Patz1	96	95.962	Jaculus_jaculus
ENSFDAG00000005614	PATZ1	100	54.720	ENSKMAG00000008157	patz1	96	54.985	Kryptolebias_marmoratus
ENSFDAG00000005614	PATZ1	100	94.419	ENSLAFG00000002317	PATZ1	96	94.419	Loxodonta_africana
ENSFDAG00000005614	PATZ1	100	97.661	ENSMFAG00000040968	PATZ1	96	97.661	Macaca_fascicularis
ENSFDAG00000005614	PATZ1	100	97.661	ENSMNEG00000037588	PATZ1	96	97.661	Macaca_nemestrina
ENSFDAG00000005614	PATZ1	100	97.856	ENSMLEG00000030938	PATZ1	96	97.856	Mandrillus_leucophaeus
ENSFDAG00000005614	PATZ1	100	54.020	ENSMAMG00000023652	patz1	97	54.161	Mastacembelus_armatus
ENSFDAG00000005614	PATZ1	88	83.788	ENSMGAG00000008439	PATZ1	100	82.594	Meleagris_gallopavo
ENSFDAG00000005614	PATZ1	100	96.881	ENSMAUG00000004129	Patz1	96	96.881	Mesocricetus_auratus
ENSFDAG00000005614	PATZ1	100	97.466	ENSMICG00000005430	PATZ1	96	97.466	Microcebus_murinus
ENSFDAG00000005614	PATZ1	100	96.881	ENSMOCG00000014488	Patz1	96	96.881	Microtus_ochrogaster
ENSFDAG00000005614	PATZ1	100	45.563	ENSMMOG00000021679	patz1	97	45.298	Mola_mola
ENSFDAG00000005614	PATZ1	100	54.307	ENSMALG00000021172	patz1	96	53.869	Monopterus_albus
ENSFDAG00000005614	PATZ1	100	96.881	MGP_CAROLIEiJ_G0016007	Patz1	96	96.881	Mus_caroli
ENSFDAG00000005614	PATZ1	100	97.076	ENSMUSG00000020453	Patz1	96	97.076	Mus_musculus
ENSFDAG00000005614	PATZ1	100	96.491	MGP_PahariEiJ_G0016884	Patz1	96	96.491	Mus_pahari
ENSFDAG00000005614	PATZ1	100	96.881	MGP_SPRETEiJ_G0016846	Patz1	96	96.881	Mus_spretus
ENSFDAG00000005614	PATZ1	100	94.872	ENSMLUG00000009942	PATZ1	96	94.872	Myotis_lucifugus
ENSFDAG00000005614	PATZ1	100	97.271	ENSNGAG00000010268	Patz1	96	97.271	Nannospalax_galili
ENSFDAG00000005614	PATZ1	100	55.766	ENSNBRG00000016032	patz1	97	55.620	Neolamprologus_brichardi
ENSFDAG00000005614	PATZ1	70	88.841	ENSMEUG00000016293	PATZ1	100	88.841	Notamacropus_eugenii
ENSFDAG00000005614	PATZ1	100	98.441	ENSODEG00000003589	PATZ1	96	98.441	Octodon_degus
ENSFDAG00000005614	PATZ1	100	52.217	ENSONIG00000004248	patz1	96	51.788	Oreochromis_niloticus
ENSFDAG00000005614	PATZ1	100	88.235	ENSOANG00000014654	PATZ1	96	89.173	Ornithorhynchus_anatinus
ENSFDAG00000005614	PATZ1	100	53.738	ENSORLG00020010937	patz1	97	53.173	Oryzias_latipes_hni
ENSFDAG00000005614	PATZ1	100	53.955	ENSORLG00015007396	patz1	97	53.814	Oryzias_latipes_hsok
ENSFDAG00000005614	PATZ1	99	58.145	ENSOMEG00000006636	patz1	96	50.938	Oryzias_melastigma
ENSFDAG00000005614	PATZ1	100	93.665	ENSOGAG00000027905	PATZ1	96	94.570	Otolemur_garnettii
ENSFDAG00000005614	PATZ1	100	98.246	ENSPPAG00000033227	PATZ1	96	98.246	Pan_paniscus
ENSFDAG00000005614	PATZ1	100	97.856	ENSPPRG00000001573	PATZ1	96	97.856	Panthera_pardus
ENSFDAG00000005614	PATZ1	89	95.408	ENSPTIG00000007937	PATZ1	90	95.400	Panthera_tigris_altaica
ENSFDAG00000005614	PATZ1	100	98.246	ENSPTRG00000014268	PATZ1	96	98.246	Pan_troglodytes
ENSFDAG00000005614	PATZ1	100	97.856	ENSPANG00000006821	PATZ1	96	97.856	Papio_anubis
ENSFDAG00000005614	PATZ1	100	59.621	ENSPKIG00000019584	patz1	97	59.475	Paramormyrops_kingsleyae
ENSFDAG00000005614	PATZ1	60	90.176	ENSPSIG00000011562	-	100	90.176	Pelodiscus_sinensis
ENSFDAG00000005614	PATZ1	62	77.778	ENSPSIG00000016553	-	91	77.053	Pelodiscus_sinensis
ENSFDAG00000005614	PATZ1	100	54.545	ENSPMGG00000010196	patz1	96	54.545	Periophthalmus_magnuspinnatus
ENSFDAG00000005614	PATZ1	100	97.076	ENSPEMG00000005321	Patz1	96	97.076	Peromyscus_maniculatus_bairdii
ENSFDAG00000005614	PATZ1	100	50.860	ENSPLAG00000010425	patz1	100	53.366	Poecilia_latipinna
ENSFDAG00000005614	PATZ1	100	50.933	ENSPMEG00000000255	patz1	97	50.000	Poecilia_mexicana
ENSFDAG00000005614	PATZ1	100	54.011	ENSPREG00000002440	patz1	97	54.011	Poecilia_reticulata
ENSFDAG00000005614	PATZ1	100	93.665	ENSPPYG00000011732	PATZ1	96	94.268	Pongo_abelii
ENSFDAG00000005614	PATZ1	100	97.856	ENSPCOG00000019729	PATZ1	96	97.856	Propithecus_coquereli
ENSFDAG00000005614	PATZ1	100	94.118	ENSPVAG00000001749	PATZ1	96	95.023	Pteropus_vampyrus
ENSFDAG00000005614	PATZ1	100	56.332	ENSPNYG00000013542	patz1	97	56.186	Pundamilia_nyererei
ENSFDAG00000005614	PATZ1	87	56.796	ENSPNAG00000017222	patz1	99	56.726	Pygocentrus_nattereri
ENSFDAG00000005614	PATZ1	100	97.661	ENSRBIG00000044231	PATZ1	96	97.661	Rhinopithecus_bieti
ENSFDAG00000005614	PATZ1	100	97.661	ENSRROG00000037155	PATZ1	96	97.661	Rhinopithecus_roxellana
ENSFDAG00000005614	PATZ1	100	98.051	ENSSBOG00000003894	PATZ1	96	98.051	Saimiri_boliviensis_boliviensis
ENSFDAG00000005614	PATZ1	57	86.538	ENSSFOG00015013244	patz1	75	73.881	Scleropages_formosus
ENSFDAG00000005614	PATZ1	100	85.285	ENSSPUG00000015298	PATZ1	95	84.132	Sphenodon_punctatus
ENSFDAG00000005614	PATZ1	88	94.854	ENSSSCG00000010027	PATZ1	100	97.917	Sus_scrofa
ENSFDAG00000005614	PATZ1	100	55.380	ENSTRUG00000015366	patz1	97	55.093	Takifugu_rubripes
ENSFDAG00000005614	PATZ1	100	92.760	ENSTTRG00000010279	PATZ1	96	95.023	Tursiops_truncatus
ENSFDAG00000005614	PATZ1	100	85.973	ENSUAMG00000015014	PATZ1	96	88.235	Ursus_americanus
ENSFDAG00000005614	PATZ1	100	70.331	ENSXETG00000004190	patz1	96	70.482	Xenopus_tropicalis
ENSFDAG00000005614	PATZ1	100	51.433	ENSXMAG00000015531	patz1	96	51.433	Xiphophorus_maculatus