EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000005839 (Gene tree)
Gene ID: 104872968
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 16347 bases
Position: chrKN123095.1:5916799-5933145
Accession: 104872968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000017231	PRP4	PF08799.11	3.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009225	PRPF4-201	3162	XM_010639377	ENSFDAP00000017231	521 (aa)	XP_010637679	A0A091DVE9

Gene Model

Click here to download ENSFDAG00000005839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000005839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000005839	PRPF4	56	30.000	ENSFDAG00000011606	POC1A	81	30.000
ENSFDAG00000005839	PRPF4	56	33.673	ENSFDAG00000007751	TBL3	66	33.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000005839	PRPF4	100	98.848	ENSG00000136875	PRPF4	100	98.848	Homo_sapiens
ENSFDAG00000005839	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSFDAG00000005839	PRPF4	100	99.040	ENSAMEG00000013048	PRPF4	98	99.040	Ailuropoda_melanoleuca
ENSFDAG00000005839	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSFDAG00000005839	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSFDAG00000005839	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSFDAG00000005839	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSFDAG00000005839	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	97	89.251	Anas_platyrhynchos
ENSFDAG00000005839	PRPF4	100	89.675	ENSACAG00000015110	PRPF4	100	89.675	Anolis_carolinensis
ENSFDAG00000005839	PRPF4	100	99.232	ENSANAG00000022464	PRPF4	96	99.232	Aotus_nancymaae
ENSFDAG00000005839	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSFDAG00000005839	PRPF4	97	62.572	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSFDAG00000005839	PRPF4	100	98.273	ENSBTAG00000004571	PRPF4	100	98.273	Bos_taurus
ENSFDAG00000005839	PRPF4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSFDAG00000005839	PRPF4	100	99.042	ENSCJAG00000017856	PRPF4	100	99.042	Callithrix_jacchus
ENSFDAG00000005839	PRPF4	100	99.040	ENSCAFG00000003224	PRPF4	97	99.040	Canis_familiaris
ENSFDAG00000005839	PRPF4	100	99.040	ENSCAFG00020022637	PRPF4	100	99.040	Canis_lupus_dingo
ENSFDAG00000005839	PRPF4	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSFDAG00000005839	PRPF4	100	99.040	ENSTSYG00000010366	PRPF4	100	99.040	Carlito_syrichta
ENSFDAG00000005839	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSFDAG00000005839	PRPF4	100	99.232	ENSCPOG00000010747	-	100	99.232	Cavia_porcellus
ENSFDAG00000005839	PRPF4	100	92.706	ENSCPOG00000014729	-	100	92.706	Cavia_porcellus
ENSFDAG00000005839	PRPF4	100	99.040	ENSCCAG00000028990	PRPF4	100	99.040	Cebus_capucinus
ENSFDAG00000005839	PRPF4	100	98.848	ENSCATG00000021552	PRPF4	100	98.848	Cercocebus_atys
ENSFDAG00000005839	PRPF4	100	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSFDAG00000005839	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSFDAG00000005839	PRPF4	99	90.680	ENSCPBG00000019136	PRPF4	74	90.680	Chrysemys_picta_bellii
ENSFDAG00000005839	PRPF4	96	58.858	ENSCING00000001299	-	97	58.218	Ciona_intestinalis
ENSFDAG00000005839	PRPF4	96	57.738	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSFDAG00000005839	PRPF4	100	99.040	ENSCANG00000003246	PRPF4	100	99.040	Colobus_angolensis_palliatus
ENSFDAG00000005839	PRPF4	100	98.848	ENSCGRG00001016992	Prpf4	100	98.848	Cricetulus_griseus_chok1gshd
ENSFDAG00000005839	PRPF4	100	98.848	ENSCGRG00000017560	Prpf4	100	98.848	Cricetulus_griseus_crigri
ENSFDAG00000005839	PRPF4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSFDAG00000005839	PRPF4	97	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSFDAG00000005839	PRPF4	100	98.467	ENSDNOG00000013203	PRPF4	100	98.467	Dasypus_novemcinctus
ENSFDAG00000005839	PRPF4	100	98.848	ENSDORG00000026275	Prpf4	100	98.848	Dipodomys_ordii
ENSFDAG00000005839	PRPF4	87	56.236	FBgn0036733	U4-U6-60K	99	50.182	Drosophila_melanogaster
ENSFDAG00000005839	PRPF4	100	96.941	ENSETEG00000020389	PRPF4	100	96.941	Echinops_telfairi
ENSFDAG00000005839	PRPF4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSFDAG00000005839	PRPF4	100	99.232	ENSEASG00005022678	PRPF4	100	99.232	Equus_asinus_asinus
ENSFDAG00000005839	PRPF4	100	99.344	ENSECAG00000007072	PRPF4	100	99.232	Equus_caballus
ENSFDAG00000005839	PRPF4	100	78.384	ENSEEUG00000007480	PRPF4	100	78.384	Erinaceus_europaeus
ENSFDAG00000005839	PRPF4	97	80.990	ENSELUG00000007510	prpf4	99	80.990	Esox_lucius
ENSFDAG00000005839	PRPF4	100	99.042	ENSFCAG00000005514	PRPF4	100	99.042	Felis_catus
ENSFDAG00000005839	PRPF4	98	88.565	ENSFALG00000005423	PRPF4	90	85.806	Ficedula_albicollis
ENSFDAG00000005839	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSFDAG00000005839	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	96	89.535	Gallus_gallus
ENSFDAG00000005839	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSFDAG00000005839	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSFDAG00000005839	PRPF4	99	90.485	ENSGAGG00000025029	PRPF4	95	90.485	Gopherus_agassizii
ENSFDAG00000005839	PRPF4	100	98.848	ENSGGOG00000006943	PRPF4	100	98.848	Gorilla_gorilla
ENSFDAG00000005839	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSFDAG00000005839	PRPF4	100	99.232	ENSHGLG00000015191	PRPF4	100	99.232	Heterocephalus_glaber_female
ENSFDAG00000005839	PRPF4	100	80.806	ENSHGLG00000003838	-	100	80.806	Heterocephalus_glaber_female
ENSFDAG00000005839	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSFDAG00000005839	PRPF4	100	80.806	ENSHGLG00100005571	-	100	80.806	Heterocephalus_glaber_male
ENSFDAG00000005839	PRPF4	97	79.010	ENSIPUG00000017956	PRPF4	99	79.010	Ictalurus_punctatus
ENSFDAG00000005839	PRPF4	100	98.656	ENSSTOG00000027833	PRPF4	100	98.656	Ictidomys_tridecemlineatus
ENSFDAG00000005839	PRPF4	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSFDAG00000005839	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSFDAG00000005839	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSFDAG00000005839	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	99	80.347	Latimeria_chalumnae
ENSFDAG00000005839	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSFDAG00000005839	PRPF4	100	98.276	ENSLAFG00000018225	PRPF4	100	98.276	Loxodonta_africana
ENSFDAG00000005839	PRPF4	100	98.656	ENSMFAG00000039397	PRPF4	100	98.656	Macaca_fascicularis
ENSFDAG00000005839	PRPF4	100	98.848	ENSMMUG00000005844	PRPF4	100	98.848	Macaca_mulatta
ENSFDAG00000005839	PRPF4	100	88.292	ENSMNEG00000033737	PRPF4	100	88.292	Macaca_nemestrina
ENSFDAG00000005839	PRPF4	100	98.848	ENSMLEG00000040284	PRPF4	100	98.848	Mandrillus_leucophaeus
ENSFDAG00000005839	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSFDAG00000005839	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSFDAG00000005839	PRPF4	99	88.462	ENSMGAG00000001796	PRPF4	97	88.462	Meleagris_gallopavo
ENSFDAG00000005839	PRPF4	100	98.273	ENSMAUG00000018022	Prpf4	100	98.273	Mesocricetus_auratus
ENSFDAG00000005839	PRPF4	100	98.848	ENSMICG00000015022	PRPF4	100	98.659	Microcebus_murinus
ENSFDAG00000005839	PRPF4	100	98.273	ENSMOCG00000018273	Prpf4	100	98.273	Microtus_ochrogaster
ENSFDAG00000005839	PRPF4	97	74.653	ENSMMOG00000021177	prpf4	99	74.653	Mola_mola
ENSFDAG00000005839	PRPF4	100	94.646	ENSMODG00000004444	-	100	94.646	Monodelphis_domestica
ENSFDAG00000005839	PRPF4	100	94.455	ENSMODG00000025096	-	97	94.455	Monodelphis_domestica
ENSFDAG00000005839	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSFDAG00000005839	PRPF4	100	98.656	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.656	Mus_caroli
ENSFDAG00000005839	PRPF4	100	98.656	ENSMUSG00000066148	Prpf4	100	98.656	Mus_musculus
ENSFDAG00000005839	PRPF4	100	98.464	MGP_PahariEiJ_G0028413	Prpf4	100	98.464	Mus_pahari
ENSFDAG00000005839	PRPF4	100	98.656	MGP_SPRETEiJ_G0027042	Prpf4	100	98.656	Mus_spretus
ENSFDAG00000005839	PRPF4	100	99.040	ENSMPUG00000007883	PRPF4	100	99.040	Mustela_putorius_furo
ENSFDAG00000005839	PRPF4	100	97.121	ENSMLUG00000008626	-	97	97.121	Myotis_lucifugus
ENSFDAG00000005839	PRPF4	100	99.040	ENSMLUG00000015309	-	97	99.040	Myotis_lucifugus
ENSFDAG00000005839	PRPF4	100	93.474	ENSNGAG00000000468	Prpf4	100	93.474	Nannospalax_galili
ENSFDAG00000005839	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSFDAG00000005839	PRPF4	100	99.232	ENSNLEG00000016647	PRPF4	100	99.232	Nomascus_leucogenys
ENSFDAG00000005839	PRPF4	99	94.358	ENSMEUG00000013256	PRPF4	100	94.358	Notamacropus_eugenii
ENSFDAG00000005839	PRPF4	100	98.276	ENSOPRG00000005302	PRPF4	100	98.276	Ochotona_princeps
ENSFDAG00000005839	PRPF4	100	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSFDAG00000005839	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSFDAG00000005839	PRPF4	100	99.040	ENSOCUG00000005046	PRPF4	100	99.040	Oryctolagus_cuniculus
ENSFDAG00000005839	PRPF4	96	74.900	ENSORLG00000019641	prpf4	98	75.200	Oryzias_latipes
ENSFDAG00000005839	PRPF4	96	74.900	ENSORLG00020019438	prpf4	98	75.200	Oryzias_latipes_hni
ENSFDAG00000005839	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSFDAG00000005839	PRPF4	100	94.242	ENSOGAG00000007802	PRPF4	98	94.242	Otolemur_garnettii
ENSFDAG00000005839	PRPF4	100	99.040	ENSOARG00000006319	PRPF4	97	99.040	Ovis_aries
ENSFDAG00000005839	PRPF4	100	98.848	ENSPPAG00000041797	PRPF4	100	98.848	Pan_paniscus
ENSFDAG00000005839	PRPF4	100	99.232	ENSPPRG00000014360	PRPF4	100	99.232	Panthera_pardus
ENSFDAG00000005839	PRPF4	100	99.232	ENSPTIG00000009574	PRPF4	100	99.232	Panthera_tigris_altaica
ENSFDAG00000005839	PRPF4	100	98.848	ENSPTRG00000021274	PRPF4	100	98.659	Pan_troglodytes
ENSFDAG00000005839	PRPF4	100	98.848	ENSPANG00000025776	PRPF4	96	98.848	Papio_anubis
ENSFDAG00000005839	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSFDAG00000005839	PRPF4	100	89.060	ENSPSIG00000010713	PRPF4	91	89.575	Pelodiscus_sinensis
ENSFDAG00000005839	PRPF4	99	58.425	ENSPMGG00000000997	prpf4	99	58.532	Periophthalmus_magnuspinnatus
ENSFDAG00000005839	PRPF4	100	98.848	ENSPEMG00000024115	Prpf4	100	98.848	Peromyscus_maniculatus_bairdii
ENSFDAG00000005839	PRPF4	99	94.358	ENSPCIG00000003821	PRPF4	99	94.358	Phascolarctos_cinereus
ENSFDAG00000005839	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSFDAG00000005839	PRPF4	82	69.659	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSFDAG00000005839	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSFDAG00000005839	PRPF4	98	98.635	ENSPCAG00000002561	PRPF4	99	98.635	Procavia_capensis
ENSFDAG00000005839	PRPF4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSFDAG00000005839	PRPF4	100	95.019	ENSPVAG00000004708	PRPF4	100	95.019	Pteropus_vampyrus
ENSFDAG00000005839	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSFDAG00000005839	PRPF4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSFDAG00000005839	PRPF4	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSFDAG00000005839	PRPF4	100	99.040	ENSRBIG00000040221	PRPF4	100	99.040	Rhinopithecus_bieti
ENSFDAG00000005839	PRPF4	100	99.040	ENSRROG00000040240	PRPF4	100	99.040	Rhinopithecus_roxellana
ENSFDAG00000005839	PRPF4	100	94.837	ENSSHAG00000017658	PRPF4	100	94.837	Sarcophilus_harrisii
ENSFDAG00000005839	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSFDAG00000005839	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSFDAG00000005839	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSFDAG00000005839	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSFDAG00000005839	PRPF4	100	90.211	ENSSPUG00000015582	PRPF4	100	90.211	Sphenodon_punctatus
ENSFDAG00000005839	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSFDAG00000005839	PRPF4	100	99.232	ENSSSCG00000024648	PRPF4	100	99.232	Sus_scrofa
ENSFDAG00000005839	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSFDAG00000005839	PRPF4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSFDAG00000005839	PRPF4	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSFDAG00000005839	PRPF4	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSFDAG00000005839	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSFDAG00000005839	PRPF4	64	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSFDAG00000005839	PRPF4	100	98.273	ENSUMAG00000019375	PRPF4	100	98.273	Ursus_maritimus
ENSFDAG00000005839	PRPF4	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSFDAG00000005839	PRPF4	100	97.905	ENSVVUG00000002476	PRPF4	100	97.905	Vulpes_vulpes
ENSFDAG00000005839	PRPF4	69	58.333	ENSXCOG00000006101	prpf4	93	59.113	Xiphophorus_couchianus
ENSFDAG00000005839	PRPF4	88	64.629	ENSXMAG00000002750	prpf4	98	65.209	Xiphophorus_maculatus