EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000006120 (Gene tree)
Gene ID: 104850438
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 2990 bases
Position: chrKN124097.1:622928-625917
Accession: 104850438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000017576	Exo_endo_phos	PF03372.23	2.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009908	APEX1-201	1459	XM_010607414	ENSFDAP00000017576	318 (aa)	XP_010605716	A0A091CWR4

Gene Model

Click here to download ENSFDAG00000006120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006120	APEX1	100	93.396	ENSG00000100823	APEX1	100	93.396	Homo_sapiens
ENSFDAG00000006120	APEX1	88	70.251	ENSAPOG00000017002	apex1	94	69.204	Acanthochromis_polyacanthus
ENSFDAG00000006120	APEX1	100	95.597	ENSAMEG00000005418	APEX1	100	95.597	Ailuropoda_melanoleuca
ENSFDAG00000006120	APEX1	87	71.942	ENSACIG00000010653	apex1	97	70.934	Amphilophus_citrinellus
ENSFDAG00000006120	APEX1	88	69.892	ENSAOCG00000009649	apex1	93	68.858	Amphiprion_ocellaris
ENSFDAG00000006120	APEX1	88	69.892	ENSAPEG00000021453	apex1	93	68.858	Amphiprion_percula
ENSFDAG00000006120	APEX1	86	72.000	ENSATEG00000002883	apex1	97	68.354	Anabas_testudineus
ENSFDAG00000006120	APEX1	100	70.497	ENSACAG00000008099	APEX1	100	70.497	Anolis_carolinensis
ENSFDAG00000006120	APEX1	100	93.711	ENSANAG00000030117	APEX1	100	93.711	Aotus_nancymaae
ENSFDAG00000006120	APEX1	87	72.101	ENSACLG00000018441	apex1	99	67.089	Astatotilapia_calliptera
ENSFDAG00000006120	APEX1	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSFDAG00000006120	APEX1	100	94.025	ENSBTAG00000002745	APEX1	100	94.025	Bos_taurus
ENSFDAG00000006120	APEX1	84	43.911	WBGene00001372	exo-3	93	43.911	Caenorhabditis_elegans
ENSFDAG00000006120	APEX1	100	94.340	ENSCJAG00000009726	APEX1	100	94.340	Callithrix_jacchus
ENSFDAG00000006120	APEX1	100	93.082	ENSCAFG00000032033	APEX1	100	93.082	Canis_familiaris
ENSFDAG00000006120	APEX1	100	93.082	ENSCAFG00020014377	-	100	93.082	Canis_lupus_dingo
ENSFDAG00000006120	APEX1	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSFDAG00000006120	APEX1	98	74.679	ENSCHIG00000014537	-	99	74.679	Capra_hircus
ENSFDAG00000006120	APEX1	100	93.396	ENSCHIG00000007298	-	100	93.396	Capra_hircus
ENSFDAG00000006120	APEX1	100	94.025	ENSTSYG00000034813	APEX1	100	94.025	Carlito_syrichta
ENSFDAG00000006120	APEX1	85	87.823	ENSCAPG00000016235	APEX1	91	96.610	Cavia_aperea
ENSFDAG00000006120	APEX1	100	95.912	ENSCPOG00000030909	APEX1	100	95.912	Cavia_porcellus
ENSFDAG00000006120	APEX1	100	81.132	ENSCCAG00000031931	-	100	81.132	Cebus_capucinus
ENSFDAG00000006120	APEX1	100	94.340	ENSCCAG00000033056	-	100	94.340	Cebus_capucinus
ENSFDAG00000006120	APEX1	100	93.082	ENSCATG00000015580	APEX1	100	93.082	Cercocebus_atys
ENSFDAG00000006120	APEX1	100	97.170	ENSCLAG00000001002	APEX1	100	97.170	Chinchilla_lanigera
ENSFDAG00000006120	APEX1	100	92.767	ENSCSAG00000016670	-	100	92.767	Chlorocebus_sabaeus
ENSFDAG00000006120	APEX1	100	92.767	ENSCSAG00000016685	-	100	92.767	Chlorocebus_sabaeus
ENSFDAG00000006120	APEX1	100	71.473	ENSCPBG00000009567	APEX1	100	71.473	Chrysemys_picta_bellii
ENSFDAG00000006120	APEX1	95	54.870	ENSCING00000008137	-	97	54.870	Ciona_intestinalis
ENSFDAG00000006120	APEX1	90	48.000	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSFDAG00000006120	APEX1	100	93.396	ENSCANG00000030726	APEX1	100	93.396	Colobus_angolensis_palliatus
ENSFDAG00000006120	APEX1	100	91.195	ENSCGRG00001017046	Apex1	100	91.195	Cricetulus_griseus_chok1gshd
ENSFDAG00000006120	APEX1	100	91.195	ENSCGRG00000008984	Apex1	100	91.195	Cricetulus_griseus_crigri
ENSFDAG00000006120	APEX1	99	64.669	ENSCSEG00000017499	apex1	99	64.669	Cynoglossus_semilaevis
ENSFDAG00000006120	APEX1	88	72.043	ENSCVAG00000022075	apex1	99	67.089	Cyprinodon_variegatus
ENSFDAG00000006120	APEX1	100	66.352	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSFDAG00000006120	APEX1	100	89.623	ENSDNOG00000042234	APEX1	95	89.623	Dasypus_novemcinctus
ENSFDAG00000006120	APEX1	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSFDAG00000006120	APEX1	100	93.082	ENSETEG00000004855	-	100	93.082	Echinops_telfairi
ENSFDAG00000006120	APEX1	75	64.017	ENSEBUG00000000622	-	92	64.017	Eptatretus_burgeri
ENSFDAG00000006120	APEX1	100	95.283	ENSEASG00005017489	APEX1	74	95.283	Equus_asinus_asinus
ENSFDAG00000006120	APEX1	100	95.283	ENSECAG00000022325	APEX1	82	95.283	Equus_caballus
ENSFDAG00000006120	APEX1	91	92.708	ENSEEUG00000012569	APEX1	100	92.708	Erinaceus_europaeus
ENSFDAG00000006120	APEX1	100	66.667	ENSELUG00000021706	apex1	100	66.667	Esox_lucius
ENSFDAG00000006120	APEX1	100	96.226	ENSFCAG00000030869	APEX1	100	96.226	Felis_catus
ENSFDAG00000006120	APEX1	99	68.671	ENSFHEG00000009031	apex1	83	68.671	Fundulus_heteroclitus
ENSFDAG00000006120	APEX1	99	61.950	ENSGMOG00000007943	apex1	99	61.950	Gadus_morhua
ENSFDAG00000006120	APEX1	88	73.118	ENSGAFG00000005311	apex1	99	68.038	Gambusia_affinis
ENSFDAG00000006120	APEX1	99	65.823	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSFDAG00000006120	APEX1	100	71.160	ENSGAGG00000014999	APEX1	100	71.160	Gopherus_agassizii
ENSFDAG00000006120	APEX1	100	93.711	ENSGGOG00000002128	APEX1	100	93.711	Gorilla_gorilla
ENSFDAG00000006120	APEX1	99	66.139	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSFDAG00000006120	APEX1	100	98.113	ENSHGLG00000002848	APEX1	100	98.113	Heterocephalus_glaber_female
ENSFDAG00000006120	APEX1	100	98.113	ENSHGLG00100017878	APEX1	100	98.113	Heterocephalus_glaber_male
ENSFDAG00000006120	APEX1	99	66.038	ENSHCOG00000009961	apex1	99	66.038	Hippocampus_comes
ENSFDAG00000006120	APEX1	100	68.966	ENSIPUG00000005799	apex1	100	68.966	Ictalurus_punctatus
ENSFDAG00000006120	APEX1	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSFDAG00000006120	APEX1	94	84.228	ENSJJAG00000020465	-	96	84.228	Jaculus_jaculus
ENSFDAG00000006120	APEX1	100	93.711	ENSJJAG00000012067	-	100	93.711	Jaculus_jaculus
ENSFDAG00000006120	APEX1	100	84.591	ENSJJAG00000003660	-	100	84.591	Jaculus_jaculus
ENSFDAG00000006120	APEX1	88	72.043	ENSKMAG00000021171	apex1	99	67.089	Kryptolebias_marmoratus
ENSFDAG00000006120	APEX1	88	68.817	ENSLBEG00000010248	apex1	99	65.300	Labrus_bergylta
ENSFDAG00000006120	APEX1	100	67.812	ENSLACG00000008617	APEX1	100	67.812	Latimeria_chalumnae
ENSFDAG00000006120	APEX1	100	66.770	ENSLOCG00000015516	apex1	99	66.770	Lepisosteus_oculatus
ENSFDAG00000006120	APEX1	100	92.138	ENSLAFG00000021872	APEX1	100	92.138	Loxodonta_africana
ENSFDAG00000006120	APEX1	100	93.082	ENSMFAG00000002565	APEX1	100	93.082	Macaca_fascicularis
ENSFDAG00000006120	APEX1	100	93.082	ENSMMUG00000048039	APEX1	100	93.082	Macaca_mulatta
ENSFDAG00000006120	APEX1	100	93.082	ENSMNEG00000036944	APEX1	100	93.082	Macaca_nemestrina
ENSFDAG00000006120	APEX1	100	93.082	ENSMLEG00000042125	APEX1	100	93.082	Mandrillus_leucophaeus
ENSFDAG00000006120	APEX1	88	72.043	ENSMAMG00000023526	apex1	99	67.823	Mastacembelus_armatus
ENSFDAG00000006120	APEX1	87	72.101	ENSMZEG00005014187	apex1	99	67.089	Maylandia_zebra
ENSFDAG00000006120	APEX1	100	91.509	ENSMAUG00000013994	Apex1	100	91.509	Mesocricetus_auratus
ENSFDAG00000006120	APEX1	100	94.654	ENSMICG00000043554	APEX1	100	94.654	Microcebus_murinus
ENSFDAG00000006120	APEX1	100	91.824	ENSMOCG00000013721	Apex1	100	91.824	Microtus_ochrogaster
ENSFDAG00000006120	APEX1	88	68.571	ENSMMOG00000010031	apex1	97	64.151	Mola_mola
ENSFDAG00000006120	APEX1	100	83.750	ENSMODG00000007125	APEX1	100	85.404	Monodelphis_domestica
ENSFDAG00000006120	APEX1	88	64.158	ENSMALG00000011699	apex1	79	62.799	Monopterus_albus
ENSFDAG00000006120	APEX1	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSFDAG00000006120	APEX1	100	94.025	ENSMUSG00000035960	Apex1	100	94.025	Mus_musculus
ENSFDAG00000006120	APEX1	100	93.396	MGP_PahariEiJ_G0030232	Apex1	100	93.396	Mus_pahari
ENSFDAG00000006120	APEX1	100	94.025	MGP_SPRETEiJ_G0020101	Apex1	100	94.025	Mus_spretus
ENSFDAG00000006120	APEX1	100	94.375	ENSMLUG00000028957	APEX1	100	94.375	Myotis_lucifugus
ENSFDAG00000006120	APEX1	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSFDAG00000006120	APEX1	100	93.396	ENSNGAG00000002725	-	100	93.396	Nannospalax_galili
ENSFDAG00000006120	APEX1	87	71.739	ENSNBRG00000005334	apex1	91	66.772	Neolamprologus_brichardi
ENSFDAG00000006120	APEX1	100	93.396	ENSNLEG00000010839	APEX1	100	93.396	Nomascus_leucogenys
ENSFDAG00000006120	APEX1	100	85.535	ENSMEUG00000014519	APEX1	100	85.535	Notamacropus_eugenii
ENSFDAG00000006120	APEX1	100	92.767	ENSOPRG00000014029	APEX1	100	92.767	Ochotona_princeps
ENSFDAG00000006120	APEX1	100	96.855	ENSODEG00000001703	-	100	96.855	Octodon_degus
ENSFDAG00000006120	APEX1	97	76.699	ENSODEG00000004777	-	99	76.699	Octodon_degus
ENSFDAG00000006120	APEX1	100	73.457	ENSODEG00000006583	-	100	73.457	Octodon_degus
ENSFDAG00000006120	APEX1	87	72.302	ENSONIG00000012089	apex1	99	67.405	Oreochromis_niloticus
ENSFDAG00000006120	APEX1	90	81.754	ENSOANG00000008836	APEX1	80	78.086	Ornithorhynchus_anatinus
ENSFDAG00000006120	APEX1	100	93.396	ENSOCUG00000005022	APEX1	100	93.396	Oryctolagus_cuniculus
ENSFDAG00000006120	APEX1	99	67.296	ENSORLG00000012378	apex1	99	68.239	Oryzias_latipes
ENSFDAG00000006120	APEX1	99	67.296	ENSORLG00020021371	apex1	99	68.239	Oryzias_latipes_hni
ENSFDAG00000006120	APEX1	99	67.296	ENSORLG00015020089	apex1	99	68.239	Oryzias_latipes_hsok
ENSFDAG00000006120	APEX1	99	67.296	ENSOMEG00000018876	apex1	99	68.239	Oryzias_melastigma
ENSFDAG00000006120	APEX1	100	94.025	ENSOGAG00000013335	-	100	94.025	Otolemur_garnettii
ENSFDAG00000006120	APEX1	98	83.333	ENSOGAG00000029355	-	100	83.333	Otolemur_garnettii
ENSFDAG00000006120	APEX1	100	92.767	ENSOARG00000019740	-	100	92.767	Ovis_aries
ENSFDAG00000006120	APEX1	97	89.935	ENSOARG00000001876	-	100	89.935	Ovis_aries
ENSFDAG00000006120	APEX1	99	78.797	ENSOARG00000014424	-	100	78.797	Ovis_aries
ENSFDAG00000006120	APEX1	100	93.711	ENSPPAG00000038760	APEX1	100	93.711	Pan_paniscus
ENSFDAG00000006120	APEX1	100	95.912	ENSPPRG00000011794	APEX1	100	95.912	Panthera_pardus
ENSFDAG00000006120	APEX1	100	96.226	ENSPTIG00000014829	APEX1	100	96.226	Panthera_tigris_altaica
ENSFDAG00000006120	APEX1	100	93.711	ENSPTRG00000006093	APEX1	100	93.711	Pan_troglodytes
ENSFDAG00000006120	APEX1	100	93.082	ENSPANG00000022757	APEX1	100	93.082	Papio_anubis
ENSFDAG00000006120	APEX1	87	68.953	ENSPKIG00000003504	apex1	100	64.596	Paramormyrops_kingsleyae
ENSFDAG00000006120	APEX1	81	65.759	ENSPMGG00000016596	apex1	75	65.759	Periophthalmus_magnuspinnatus
ENSFDAG00000006120	APEX1	100	93.396	ENSPEMG00000019097	Apex1	100	93.396	Peromyscus_maniculatus_bairdii
ENSFDAG00000006120	APEX1	94	66.333	ENSPMAG00000007275	-	99	66.333	Petromyzon_marinus
ENSFDAG00000006120	APEX1	100	83.072	ENSPCIG00000023274	APEX1	100	85.047	Phascolarctos_cinereus
ENSFDAG00000006120	APEX1	88	73.477	ENSPFOG00000004178	apex1	99	68.770	Poecilia_formosa
ENSFDAG00000006120	APEX1	88	73.118	ENSPLAG00000012779	apex1	99	68.770	Poecilia_latipinna
ENSFDAG00000006120	APEX1	88	73.477	ENSPMEG00000019623	apex1	99	68.770	Poecilia_mexicana
ENSFDAG00000006120	APEX1	88	72.760	ENSPREG00000014298	apex1	99	68.139	Poecilia_reticulata
ENSFDAG00000006120	APEX1	100	93.711	ENSPPYG00000005565	APEX1	100	93.711	Pongo_abelii
ENSFDAG00000006120	APEX1	100	90.252	ENSPCAG00000010376	APEX1	100	90.252	Procavia_capensis
ENSFDAG00000006120	APEX1	100	94.654	ENSPCOG00000021564	APEX1	100	94.654	Propithecus_coquereli
ENSFDAG00000006120	APEX1	100	94.375	ENSPVAG00000010736	APEX1	100	94.375	Pteropus_vampyrus
ENSFDAG00000006120	APEX1	87	72.101	ENSPNYG00000023940	apex1	99	67.089	Pundamilia_nyererei
ENSFDAG00000006120	APEX1	93	67.230	ENSPNAG00000020897	apex1	96	67.119	Pygocentrus_nattereri
ENSFDAG00000006120	APEX1	100	93.082	ENSRNOG00000009663	Apex1	100	93.082	Rattus_norvegicus
ENSFDAG00000006120	APEX1	100	93.082	ENSRBIG00000038325	APEX1	99	93.082	Rhinopithecus_bieti
ENSFDAG00000006120	APEX1	100	94.025	ENSSBOG00000018921	-	100	94.025	Saimiri_boliviensis_boliviensis
ENSFDAG00000006120	APEX1	100	78.931	ENSSBOG00000031372	-	100	78.931	Saimiri_boliviensis_boliviensis
ENSFDAG00000006120	APEX1	100	82.099	ENSSHAG00000013524	APEX1	100	83.436	Sarcophilus_harrisii
ENSFDAG00000006120	APEX1	100	63.208	ENSSFOG00015001948	apex1	100	62.893	Scleropages_formosus
ENSFDAG00000006120	APEX1	87	70.504	ENSSMAG00000013348	apex1	99	66.562	Scophthalmus_maximus
ENSFDAG00000006120	APEX1	99	65.823	ENSSDUG00000016377	apex1	99	65.823	Seriola_dumerili
ENSFDAG00000006120	APEX1	99	66.456	ENSSLDG00000023005	apex1	99	66.456	Seriola_lalandi_dorsalis
ENSFDAG00000006120	APEX1	95	72.093	ENSSPUG00000000531	APEX1	99	72.093	Sphenodon_punctatus
ENSFDAG00000006120	APEX1	88	70.609	ENSSPAG00000000458	apex1	96	68.601	Stegastes_partitus
ENSFDAG00000006120	APEX1	98	54.403	ENSSSCG00000039705	-	99	56.954	Sus_scrofa
ENSFDAG00000006120	APEX1	100	93.711	ENSSSCG00000040060	-	100	93.711	Sus_scrofa
ENSFDAG00000006120	APEX1	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSFDAG00000006120	APEX1	87	68.345	ENSTRUG00000004268	apex1	95	63.924	Takifugu_rubripes
ENSFDAG00000006120	APEX1	99	64.241	ENSTNIG00000005778	apex1	99	64.241	Tetraodon_nigroviridis
ENSFDAG00000006120	APEX1	100	90.566	ENSTBEG00000006405	APEX1	100	90.566	Tupaia_belangeri
ENSFDAG00000006120	APEX1	74	94.492	ENSTTRG00000007860	APEX1	100	94.492	Tursiops_truncatus
ENSFDAG00000006120	APEX1	100	95.283	ENSUAMG00000010457	APEX1	100	95.283	Ursus_americanus
ENSFDAG00000006120	APEX1	100	95.283	ENSUMAG00000009178	APEX1	100	95.283	Ursus_maritimus
ENSFDAG00000006120	APEX1	74	88.983	ENSVPAG00000005083	APEX1	100	88.983	Vicugna_pacos
ENSFDAG00000006120	APEX1	100	92.453	ENSVVUG00000009010	APEX1	100	92.453	Vulpes_vulpes
ENSFDAG00000006120	APEX1	100	67.290	ENSXETG00000024773	apex1	100	67.290	Xenopus_tropicalis
ENSFDAG00000006120	APEX1	88	73.118	ENSXCOG00000015233	apex1	99	68.354	Xiphophorus_couchianus
ENSFDAG00000006120	APEX1	93	68.730	ENSXMAG00000006195	apex1	99	68.354	Xiphophorus_maculatus