EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000006199 (Gene tree)
Gene ID: 104876171
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 41045 bases
Position: chrKN123497.1:1013878-1054922
Accession: 104876171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000017662	MMR_HSR1	PF01926.23	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000010048	SRL-201	1419	XM_010644068	ENSFDAP00000017662	472 (aa)	XP_010642370	-

Gene Model

Click here to download ENSFDAG00000006199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000006199	SRL	82	32.391	ENSFDAG00000015675	EHD2	69	32.552
ENSFDAG00000006199	SRL	77	33.973	ENSFDAG00000007697	EHD1	67	33.973
ENSFDAG00000006199	SRL	74	33.714	ENSFDAG00000017946	EHD3	67	33.875
ENSFDAG00000006199	SRL	54	37.008	ENSFDAG00000015044	EHD4	53	37.008

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006199	SRL	100	96.195	ENSG00000185739	SRL	100	98.376	Homo_sapiens
ENSFDAG00000006199	SRL	94	76.697	ENSAPOG00000012432	SRL	98	75.168	Acanthochromis_polyacanthus
ENSFDAG00000006199	SRL	100	81.568	ENSAPOG00000018093	srl	100	84.009	Acanthochromis_polyacanthus
ENSFDAG00000006199	SRL	98	96.970	ENSAMEG00000010862	SRL	52	96.970	Ailuropoda_melanoleuca
ENSFDAG00000006199	SRL	96	83.186	ENSACIG00000015799	srl	99	83.186	Amphilophus_citrinellus
ENSFDAG00000006199	SRL	94	75.000	ENSACIG00000015419	SRL	99	75.000	Amphilophus_citrinellus
ENSFDAG00000006199	SRL	97	74.348	ENSAOCG00000017049	SRL	99	74.617	Amphiprion_ocellaris
ENSFDAG00000006199	SRL	92	84.988	ENSAOCG00000007574	srl	99	84.988	Amphiprion_ocellaris
ENSFDAG00000006199	SRL	97	70.588	ENSAPEG00000006533	SRL	99	70.833	Amphiprion_percula
ENSFDAG00000006199	SRL	100	81.780	ENSAPEG00000006911	srl	96	83.407	Amphiprion_percula
ENSFDAG00000006199	SRL	100	81.568	ENSATEG00000024315	srl	97	82.675	Anabas_testudineus
ENSFDAG00000006199	SRL	94	73.846	ENSATEG00000009643	SRL	52	72.747	Anabas_testudineus
ENSFDAG00000006199	SRL	100	86.475	ENSACAG00000016380	SRL	85	89.655	Anolis_carolinensis
ENSFDAG00000006199	SRL	98	82.581	ENSACLG00000027685	srl	99	82.637	Astatotilapia_calliptera
ENSFDAG00000006199	SRL	94	72.967	ENSACLG00000024674	SRL	57	71.868	Astatotilapia_calliptera
ENSFDAG00000006199	SRL	99	80.679	ENSAMXG00000018789	srl	86	84.127	Astyanax_mexicanus
ENSFDAG00000006199	SRL	88	78.072	ENSAMXG00000038693	SRL	100	73.731	Astyanax_mexicanus
ENSFDAG00000006199	SRL	96	96.468	ENSBTAG00000001078	SRL	57	96.468	Bos_taurus
ENSFDAG00000006199	SRL	94	97.968	ENSCJAG00000019750	SRL	96	97.345	Callithrix_jacchus
ENSFDAG00000006199	SRL	97	97.598	ENSCAFG00000019233	SRL	84	98.009	Canis_familiaris
ENSFDAG00000006199	SRL	96	98.009	ENSCAFG00020025024	SRL	56	98.009	Canis_lupus_dingo
ENSFDAG00000006199	SRL	99	95.054	ENSCHIG00000017927	SRL	57	96.044	Capra_hircus
ENSFDAG00000006199	SRL	100	97.463	ENSTSYG00000007919	SRL	100	99.304	Carlito_syrichta
ENSFDAG00000006199	SRL	100	98.093	ENSCPOG00000012643	SRL	100	98.093	Cavia_porcellus
ENSFDAG00000006199	SRL	94	91.648	ENSCCAG00000032646	SRL	100	98.417	Cebus_capucinus
ENSFDAG00000006199	SRL	100	96.406	ENSCATG00000032227	-	100	96.406	Cercocebus_atys
ENSFDAG00000006199	SRL	100	98.305	ENSCLAG00000016242	SRL	100	98.305	Chinchilla_lanigera
ENSFDAG00000006199	SRL	82	97.403	ENSCHOG00000001618	SRL	52	97.403	Choloepus_hoffmanni
ENSFDAG00000006199	SRL	96	93.523	ENSCPBG00000026371	SRL	95	89.633	Chrysemys_picta_bellii
ENSFDAG00000006199	SRL	88	60.192	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSFDAG00000006199	SRL	100	96.406	ENSCANG00000035872	SRL	100	98.376	Colobus_angolensis_palliatus
ENSFDAG00000006199	SRL	100	98.305	ENSCGRG00001016630	Srl	100	98.305	Cricetulus_griseus_chok1gshd
ENSFDAG00000006199	SRL	100	98.305	ENSCGRG00000005458	Srl	100	98.305	Cricetulus_griseus_crigri
ENSFDAG00000006199	SRL	99	70.362	ENSCSEG00000011866	SRL	92	71.930	Cynoglossus_semilaevis
ENSFDAG00000006199	SRL	100	81.780	ENSCSEG00000016151	srl	97	82.418	Cynoglossus_semilaevis
ENSFDAG00000006199	SRL	94	75.221	ENSCVAG00000022465	SRL	60	74.336	Cyprinodon_variegatus
ENSFDAG00000006199	SRL	100	81.568	ENSCVAG00000003513	srl	96	84.163	Cyprinodon_variegatus
ENSFDAG00000006199	SRL	100	82.415	ENSDARG00000104587	srl	97	83.921	Danio_rerio
ENSFDAG00000006199	SRL	80	77.083	ENSDARG00000112959	CABZ01072309.1	100	77.083	Danio_rerio
ENSFDAG00000006199	SRL	97	96.711	ENSDNOG00000011643	SRL	55	96.711	Dasypus_novemcinctus
ENSFDAG00000006199	SRL	100	97.669	ENSDORG00000014807	Srl	100	97.669	Dipodomys_ordii
ENSFDAG00000006199	SRL	78	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSFDAG00000006199	SRL	96	96.909	ENSEASG00005000942	SRL	55	96.909	Equus_asinus_asinus
ENSFDAG00000006199	SRL	99	95.975	ENSECAG00000024219	SRL	95	97.118	Equus_caballus
ENSFDAG00000006199	SRL	100	77.823	ENSELUG00000015616	srl	97	78.723	Esox_lucius
ENSFDAG00000006199	SRL	100	94.926	ENSFCAG00000022075	SRL	96	97.345	Felis_catus
ENSFDAG00000006199	SRL	96	90.728	ENSFALG00000004328	SRL	64	91.131	Ficedula_albicollis
ENSFDAG00000006199	SRL	100	80.932	ENSFHEG00000011239	srl	97	81.978	Fundulus_heteroclitus
ENSFDAG00000006199	SRL	100	70.902	ENSFHEG00000011854	SRL	98	76.697	Fundulus_heteroclitus
ENSFDAG00000006199	SRL	93	81.236	ENSGMOG00000014954	srl	99	81.236	Gadus_morhua
ENSFDAG00000006199	SRL	99	88.936	ENSGALG00000038884	SRL	95	90.687	Gallus_gallus
ENSFDAG00000006199	SRL	100	80.932	ENSGAFG00000000010	srl	97	83.371	Gambusia_affinis
ENSFDAG00000006199	SRL	94	76.697	ENSGAFG00000016984	SRL	98	76.697	Gambusia_affinis
ENSFDAG00000006199	SRL	93	81.898	ENSGACG00000011332	srl	99	81.898	Gasterosteus_aculeatus
ENSFDAG00000006199	SRL	100	95.983	ENSGGOG00000011312	-	96	97.566	Gorilla_gorilla
ENSFDAG00000006199	SRL	98	82.581	ENSHBUG00000007581	srl	99	82.637	Haplochromis_burtoni
ENSFDAG00000006199	SRL	94	72.747	ENSHBUG00000015710	SRL	57	72.747	Haplochromis_burtoni
ENSFDAG00000006199	SRL	100	99.153	ENSHGLG00000015271	SRL	100	99.153	Heterocephalus_glaber_female
ENSFDAG00000006199	SRL	100	99.153	ENSHGLG00100019378	SRL	100	99.153	Heterocephalus_glaber_male
ENSFDAG00000006199	SRL	94	72.848	ENSHCOG00000001012	SRL	50	71.744	Hippocampus_comes
ENSFDAG00000006199	SRL	99	80.638	ENSHCOG00000008687	srl	98	83.484	Hippocampus_comes
ENSFDAG00000006199	SRL	100	80.085	ENSIPUG00000012513	srl	97	80.921	Ictalurus_punctatus
ENSFDAG00000006199	SRL	92	70.413	ENSIPUG00000011609	SRL	95	69.266	Ictalurus_punctatus
ENSFDAG00000006199	SRL	100	98.093	ENSSTOG00000021151	-	100	98.093	Ictidomys_tridecemlineatus
ENSFDAG00000006199	SRL	100	97.669	ENSJJAG00000016400	Srl	100	97.669	Jaculus_jaculus
ENSFDAG00000006199	SRL	93	76.417	ENSKMAG00000019537	SRL	100	76.417	Kryptolebias_marmoratus
ENSFDAG00000006199	SRL	98	81.385	ENSKMAG00000014115	srl	93	85.748	Kryptolebias_marmoratus
ENSFDAG00000006199	SRL	100	81.568	ENSLBEG00000026643	srl	96	82.781	Labrus_bergylta
ENSFDAG00000006199	SRL	97	74.292	ENSLBEG00000013811	SRL	99	74.179	Labrus_bergylta
ENSFDAG00000006199	SRL	96	85.841	ENSLACG00000002825	SRL	99	85.841	Latimeria_chalumnae
ENSFDAG00000006199	SRL	99	83.369	ENSLOCG00000002644	srl	96	84.956	Lepisosteus_oculatus
ENSFDAG00000006199	SRL	97	96.280	ENSLAFG00000006329	SRL	52	96.280	Loxodonta_africana
ENSFDAG00000006199	SRL	91	98.376	ENSMFAG00000037383	SRL	100	98.376	Macaca_fascicularis
ENSFDAG00000006199	SRL	97	96.732	ENSMNEG00000019236	-	97	96.732	Macaca_nemestrina
ENSFDAG00000006199	SRL	100	88.584	ENSMLEG00000032156	SRL	95	89.381	Mandrillus_leucophaeus
ENSFDAG00000006199	SRL	93	73.789	ENSMAMG00000013756	SRL	53	73.684	Mastacembelus_armatus
ENSFDAG00000006199	SRL	99	80.810	ENSMAMG00000023322	srl	94	84.163	Mastacembelus_armatus
ENSFDAG00000006199	SRL	98	82.581	ENSMZEG00005004548	srl	99	82.637	Maylandia_zebra
ENSFDAG00000006199	SRL	94	72.967	ENSMZEG00005004010	SRL	57	71.868	Maylandia_zebra
ENSFDAG00000006199	SRL	96	90.687	ENSMGAG00000009342	SRL	95	92.287	Meleagris_gallopavo
ENSFDAG00000006199	SRL	96	97.124	ENSMICG00000032307	SRL	96	97.124	Microcebus_murinus
ENSFDAG00000006199	SRL	100	97.458	ENSMOCG00000008208	Srl	100	97.458	Microtus_ochrogaster
ENSFDAG00000006199	SRL	93	73.187	ENSMMOG00000021572	SRL	99	73.187	Mola_mola
ENSFDAG00000006199	SRL	94	83.937	ENSMMOG00000013970	srl	98	83.937	Mola_mola
ENSFDAG00000006199	SRL	96	96.689	ENSMODG00000016380	-	51	96.689	Monodelphis_domestica
ENSFDAG00000006199	SRL	100	81.184	ENSMALG00000005039	srl	98	83.258	Monopterus_albus
ENSFDAG00000006199	SRL	89	76.134	ENSMALG00000000670	SRL	98	75.179	Monopterus_albus
ENSFDAG00000006199	SRL	100	97.246	MGP_CAROLIEiJ_G0020400	Srl	100	97.246	Mus_caroli
ENSFDAG00000006199	SRL	100	97.246	ENSMUSG00000022519	Srl	100	97.246	Mus_musculus
ENSFDAG00000006199	SRL	100	97.246	MGP_SPRETEiJ_G0021294	Srl	100	97.246	Mus_spretus
ENSFDAG00000006199	SRL	96	97.788	ENSMPUG00000015025	SRL	55	97.788	Mustela_putorius_furo
ENSFDAG00000006199	SRL	96	97.124	ENSMLUG00000030733	SRL	57	97.124	Myotis_lucifugus
ENSFDAG00000006199	SRL	100	97.246	ENSNGAG00000019741	Srl	100	97.246	Nannospalax_galili
ENSFDAG00000006199	SRL	98	82.581	ENSNBRG00000023775	srl	96	83.186	Neolamprologus_brichardi
ENSFDAG00000006199	SRL	94	72.967	ENSNBRG00000002422	SRL	62	68.632	Neolamprologus_brichardi
ENSFDAG00000006199	SRL	100	89.641	ENSNLEG00000029051	SRL	95	90.508	Nomascus_leucogenys
ENSFDAG00000006199	SRL	96	91.189	ENSOPRG00000000477	-	53	91.189	Ochotona_princeps
ENSFDAG00000006199	SRL	100	97.458	ENSODEG00000013256	SRL	100	97.458	Octodon_degus
ENSFDAG00000006199	SRL	98	81.996	ENSONIG00000005192	srl	96	82.965	Oreochromis_niloticus
ENSFDAG00000006199	SRL	97	96.507	ENSOCUG00000025140	SRL	50	96.507	Oryctolagus_cuniculus
ENSFDAG00000006199	SRL	100	80.508	ENSORLG00000008291	srl	92	85.309	Oryzias_latipes
ENSFDAG00000006199	SRL	96	74.279	ENSORLG00000015064	SRL	98	74.279	Oryzias_latipes
ENSFDAG00000006199	SRL	96	74.501	ENSORLG00020018173	SRL	98	74.501	Oryzias_latipes_hni
ENSFDAG00000006199	SRL	100	80.720	ENSORLG00020019784	srl	79	85.567	Oryzias_latipes_hni
ENSFDAG00000006199	SRL	96	74.723	ENSORLG00015019063	SRL	98	74.723	Oryzias_latipes_hsok
ENSFDAG00000006199	SRL	100	80.297	ENSORLG00015009342	srl	94	81.319	Oryzias_latipes_hsok
ENSFDAG00000006199	SRL	100	80.508	ENSOMEG00000010006	srl	98	83.409	Oryzias_melastigma
ENSFDAG00000006199	SRL	94	73.085	ENSOMEG00000005682	SRL	53	73.407	Oryzias_melastigma
ENSFDAG00000006199	SRL	96	96.696	ENSOGAG00000029266	SRL	55	96.696	Otolemur_garnettii
ENSFDAG00000006199	SRL	99	95.054	ENSOARG00000003074	SRL	57	96.674	Ovis_aries
ENSFDAG00000006199	SRL	96	97.566	ENSPPAG00000024919	-	100	98.376	Pan_paniscus
ENSFDAG00000006199	SRL	100	95.137	ENSPPRG00000010274	SRL	100	98.144	Panthera_pardus
ENSFDAG00000006199	SRL	100	95.137	ENSPTIG00000015162	SRL	100	98.144	Panthera_tigris_altaica
ENSFDAG00000006199	SRL	100	96.195	ENSPTRG00000007712	SRL	100	98.376	Pan_troglodytes
ENSFDAG00000006199	SRL	97	96.950	ENSPANG00000013804	SRL	98	96.950	Papio_anubis
ENSFDAG00000006199	SRL	100	74.576	ENSPKIG00000024974	SRL	88	76.923	Paramormyrops_kingsleyae
ENSFDAG00000006199	SRL	100	81.395	ENSPKIG00000006405	srl	93	84.615	Paramormyrops_kingsleyae
ENSFDAG00000006199	SRL	96	90.949	ENSPSIG00000008586	SRL	51	90.949	Pelodiscus_sinensis
ENSFDAG00000006199	SRL	97	82.353	ENSPMGG00000021081	srl	97	83.223	Periophthalmus_magnuspinnatus
ENSFDAG00000006199	SRL	94	73.756	ENSPMGG00000023505	-	99	73.034	Periophthalmus_magnuspinnatus
ENSFDAG00000006199	SRL	100	97.458	ENSPEMG00000015842	Srl	100	97.458	Peromyscus_maniculatus_bairdii
ENSFDAG00000006199	SRL	89	67.890	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSFDAG00000006199	SRL	96	96.009	ENSPCIG00000012128	SRL	98	96.009	Phascolarctos_cinereus
ENSFDAG00000006199	SRL	100	79.339	ENSPFOG00000011408	srl	94	81.798	Poecilia_formosa
ENSFDAG00000006199	SRL	94	76.244	ENSPLAG00000002932	SRL	98	75.113	Poecilia_latipinna
ENSFDAG00000006199	SRL	97	81.917	ENSPLAG00000008017	srl	97	83.596	Poecilia_latipinna
ENSFDAG00000006199	SRL	94	73.961	ENSPMEG00000005890	SRL	59	73.187	Poecilia_mexicana
ENSFDAG00000006199	SRL	100	81.144	ENSPMEG00000006745	srl	97	83.596	Poecilia_mexicana
ENSFDAG00000006199	SRL	100	80.720	ENSPREG00000007751	srl	99	83.371	Poecilia_reticulata
ENSFDAG00000006199	SRL	94	77.376	ENSPREG00000000315	SRL	98	76.244	Poecilia_reticulata
ENSFDAG00000006199	SRL	89	98.568	ENSPPYG00000007053	SRL	98	98.568	Pongo_abelii
ENSFDAG00000006199	SRL	96	96.247	ENSPCAG00000003378	-	51	96.247	Procavia_capensis
ENSFDAG00000006199	SRL	97	96.725	ENSPCOG00000023135	SRL	100	98.144	Propithecus_coquereli
ENSFDAG00000006199	SRL	96	98.009	ENSPVAG00000006586	SRL	56	98.009	Pteropus_vampyrus
ENSFDAG00000006199	SRL	94	72.967	ENSPNYG00000003423	SRL	57	71.868	Pundamilia_nyererei
ENSFDAG00000006199	SRL	98	82.581	ENSPNYG00000001200	srl	99	82.637	Pundamilia_nyererei
ENSFDAG00000006199	SRL	97	73.753	ENSPNAG00000007361	-	93	74.009	Pygocentrus_nattereri
ENSFDAG00000006199	SRL	100	79.237	ENSPNAG00000023106	srl	94	82.579	Pygocentrus_nattereri
ENSFDAG00000006199	SRL	97	97.162	ENSRNOG00000005269	Srl	51	97.162	Rattus_norvegicus
ENSFDAG00000006199	SRL	97	96.507	ENSRBIG00000042358	SRL	51	96.507	Rhinopithecus_bieti
ENSFDAG00000006199	SRL	94	97.968	ENSSBOG00000029273	SRL	96	97.345	Saimiri_boliviensis_boliviensis
ENSFDAG00000006199	SRL	97	96.053	ENSSHAG00000011715	-	51	96.896	Sarcophilus_harrisii
ENSFDAG00000006199	SRL	100	79.339	ENSSFOG00015009773	srl	97	83.480	Scleropages_formosus
ENSFDAG00000006199	SRL	94	76.697	ENSSFOG00015021327	SRL	51	75.109	Scleropages_formosus
ENSFDAG00000006199	SRL	100	81.184	ENSSMAG00000016274	srl	99	82.456	Scophthalmus_maximus
ENSFDAG00000006199	SRL	93	73.304	ENSSMAG00000002232	SRL	50	72.088	Scophthalmus_maximus
ENSFDAG00000006199	SRL	94	84.615	ENSSDUG00000010808	srl	97	84.615	Seriola_dumerili
ENSFDAG00000006199	SRL	94	75.056	ENSSDUG00000009161	SRL	98	75.056	Seriola_dumerili
ENSFDAG00000006199	SRL	96	83.444	ENSSLDG00000022024	srl	95	84.615	Seriola_lalandi_dorsalis
ENSFDAG00000006199	SRL	94	74.617	ENSSLDG00000014601	SRL	99	74.725	Seriola_lalandi_dorsalis
ENSFDAG00000006199	SRL	96	90.708	ENSSPUG00000016859	SRL	99	90.708	Sphenodon_punctatus
ENSFDAG00000006199	SRL	93	76.190	ENSSPAG00000014254	SRL	98	75.057	Stegastes_partitus
ENSFDAG00000006199	SRL	100	81.992	ENSSPAG00000019105	srl	96	83.444	Stegastes_partitus
ENSFDAG00000006199	SRL	96	96.264	ENSSSCG00000007949	SRL	99	97.098	Sus_scrofa
ENSFDAG00000006199	SRL	77	92.541	ENSTGUG00000016121	-	96	93.391	Taeniopygia_guttata
ENSFDAG00000006199	SRL	96	90.909	ENSTGUG00000003951	-	99	90.909	Taeniopygia_guttata
ENSFDAG00000006199	SRL	89	76.134	ENSTRUG00000013310	SRL	55	76.134	Takifugu_rubripes
ENSFDAG00000006199	SRL	100	81.568	ENSTRUG00000006005	srl	97	82.198	Takifugu_rubripes
ENSFDAG00000006199	SRL	96	82.159	ENSTNIG00000009739	srl	97	81.978	Tetraodon_nigroviridis
ENSFDAG00000006199	SRL	96	98.009	ENSUAMG00000005701	SRL	56	98.009	Ursus_americanus
ENSFDAG00000006199	SRL	96	98.230	ENSUMAG00000002574	SRL	56	98.230	Ursus_maritimus
ENSFDAG00000006199	SRL	96	97.797	ENSVVUG00000016331	-	50	97.797	Vulpes_vulpes
ENSFDAG00000006199	SRL	98	87.905	ENSXETG00000017313	srl	100	89.381	Xenopus_tropicalis
ENSFDAG00000006199	SRL	96	75.388	ENSXCOG00000014584	SRL	100	75.388	Xiphophorus_couchianus
ENSFDAG00000006199	SRL	89	85.273	ENSXCOG00000010424	srl	97	85.273	Xiphophorus_couchianus
ENSFDAG00000006199	SRL	100	80.932	ENSXMAG00000004625	srl	92	82.198	Xiphophorus_maculatus
ENSFDAG00000006199	SRL	94	74.286	ENSXMAG00000027598	SRL	62	73.846	Xiphophorus_maculatus