EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFDAG00000006317 (Gene tree)
Gene ID
104865536
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Fukomys_damarensis
Status
putative
Strand
Minus strand
Length
24290 bases
Position
chrKN122310.1:4865043-4889332
Accession
104865536
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFDAP00000004781CPSF73-100_CPF11718.84.5e-5411
ENSFDAP00000004781Beta-CaspPF10996.83.6e-3411
ENSFDAP00000004781Lactamase_BPF00753.279.4e-1911
ENSFDAP00000004781RMMBLPF07521.121.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFDAT00000018289CPSF3-2012651XM_010629075ENSFDAP00000004781689 (aa)XP_010627377UPI00053FE8B0
Gene Model
Click here to download ENSFDAG00000006317's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006317's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFDAG00000006317CPSF37137.849ENSFDAG00000009131INTS118237.849
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFDAG00000006317CPSF39997.361ENSG00000119203CPSF3100100.000Homo_sapiens
ENSFDAG00000006317CPSF37296.593ENSAPOG00000012241CPSF39096.579Acanthochromis_polyacanthus
ENSFDAG00000006317CPSF39985.125ENSAPOG00000022087cpsf39885.125Acanthochromis_polyacanthus
ENSFDAG00000006317CPSF39997.361ENSAMEG00000008493CPSF39997.361Ailuropoda_melanoleuca
ENSFDAG00000006317CPSF39182.962ENSACIG00000009846cpsf39982.962Amphilophus_citrinellus
ENSFDAG00000006317CPSF39186.169ENSACIG00000023663CPSF39986.169Amphilophus_citrinellus
ENSFDAG00000006317CPSF39985.272ENSAOCG00000022056cpsf39490.816Amphiprion_ocellaris
ENSFDAG00000006317CPSF39987.334ENSAOCG00000010077CPSF39887.334Amphiprion_ocellaris
ENSFDAG00000006317CPSF39987.334ENSAPEG00000021167CPSF39887.334Amphiprion_percula
ENSFDAG00000006317CPSF39985.420ENSAPEG00000019526cpsf39885.420Amphiprion_percula
ENSFDAG00000006317CPSF39982.916ENSATEG00000014525CPSF39882.916Anabas_testudineus
ENSFDAG00000006317CPSF39985.420ENSATEG00000003959cpsf39885.420Anabas_testudineus
ENSFDAG00000006317CPSF39794.179ENSAPLG00000006941CPSF39894.179Anas_platyrhynchos
ENSFDAG00000006317CPSF39291.956ENSACAG00000001759CPSF39991.956Anolis_carolinensis
ENSFDAG00000006317CPSF39990.909ENSANAG00000031254CPSF39991.291Aotus_nancymaae
ENSFDAG00000006317CPSF39785.714ENSACLG00000014484cpsf39985.714Astatotilapia_calliptera
ENSFDAG00000006317CPSF39186.010ENSACLG00000018846CPSF39986.010Astatotilapia_calliptera
ENSFDAG00000006317CPSF39987.187ENSAMXG00000004786cpsf39887.187Astyanax_mexicanus
ENSFDAG00000006317CPSF39997.507ENSBTAG00000019735CPSF39997.507Bos_taurus
ENSFDAG00000006317CPSF39058.898WBGene00013460cpsf-38958.898Caenorhabditis_elegans
ENSFDAG00000006317CPSF39996.921ENSCJAG00000006276CPSF39996.921Callithrix_jacchus
ENSFDAG00000006317CPSF39997.361ENSCAFG00000003375CPSF39597.361Canis_familiaris
ENSFDAG00000006317CPSF39098.061ENSCAFG00020026799CPSF310098.061Canis_lupus_dingo
ENSFDAG00000006317CPSF39997.507ENSCHIG00000013973CPSF39997.507Capra_hircus
ENSFDAG00000006317CPSF39997.214ENSTSYG00000002967CPSF39997.214Carlito_syrichta
ENSFDAG00000006317CPSF39798.647ENSCAPG00000013851CPSF39998.647Cavia_aperea
ENSFDAG00000006317CPSF39998.534ENSCPOG00000011299CPSF39998.534Cavia_porcellus
ENSFDAG00000006317CPSF39997.067ENSCCAG00000036730CPSF39997.067Cebus_capucinus
ENSFDAG00000006317CPSF39994.583ENSCATG00000014770CPSF39998.623Cercocebus_atys
ENSFDAG00000006317CPSF39998.240ENSCLAG00000002727CPSF39998.240Chinchilla_lanigera
ENSFDAG00000006317CPSF39989.443ENSCSAG00000007125CPSF39989.443Chlorocebus_sabaeus
ENSFDAG00000006317CPSF385100.000ENSCHOG00000000180CPSF38570.423Choloepus_hoffmanni
ENSFDAG00000006317CPSF39994.567ENSCPBG00000014074CPSF39994.567Chrysemys_picta_bellii
ENSFDAG00000006317CPSF39867.398ENSCING00000007214-9767.398Ciona_intestinalis
ENSFDAG00000006317CPSF39984.402ENSCANG00000034435CPSF39984.402Colobus_angolensis_palliatus
ENSFDAG00000006317CPSF39996.921ENSCGRG00001013134Cpsf39996.921Cricetulus_griseus_chok1gshd
ENSFDAG00000006317CPSF39996.921ENSCGRG00000018319Cpsf39996.921Cricetulus_griseus_crigri
ENSFDAG00000006317CPSF39986.471ENSCSEG00000002021CPSF39986.223Cynoglossus_semilaevis
ENSFDAG00000006317CPSF39987.629ENSCVAG00000015067CPSF39887.629Cyprinodon_variegatus
ENSFDAG00000006317CPSF39987.923ENSDARG00000027649cpsf39887.923Danio_rerio
ENSFDAG00000006317CPSF39995.900ENSDNOG00000008940CPSF39595.900Dasypus_novemcinctus
ENSFDAG00000006317CPSF39497.542ENSDORG00000014263Cpsf310097.542Dipodomys_ordii
ENSFDAG00000006317CPSF39866.863FBgn0261065Cpsf739866.863Drosophila_melanogaster
ENSFDAG00000006317CPSF39483.871ENSETEG00000003893CPSF310083.871Echinops_telfairi
ENSFDAG00000006317CPSF39878.479ENSEBUG00000009018cpsf39878.623Eptatretus_burgeri
ENSFDAG00000006317CPSF39997.361ENSEASG00005003970CPSF39997.361Equus_asinus_asinus
ENSFDAG00000006317CPSF39997.361ENSECAG00000019911CPSF39997.361Equus_caballus
ENSFDAG00000006317CPSF39981.672ENSEEUG00000015422CPSF39981.672Erinaceus_europaeus
ENSFDAG00000006317CPSF39987.225ENSELUG00000013775cpsf39987.225Esox_lucius
ENSFDAG00000006317CPSF39997.507ENSFCAG00000007852CPSF39997.507Felis_catus
ENSFDAG00000006317CPSF39493.953ENSFALG00000006572CPSF39993.953Ficedula_albicollis
ENSFDAG00000006317CPSF35968.293ENSFHEG00000012186CPSF39968.293Fundulus_heteroclitus
ENSFDAG00000006317CPSF39985.420ENSFHEG00000014774cpsf39885.420Fundulus_heteroclitus
ENSFDAG00000006317CPSF39986.303ENSGMOG00000003157cpsf39886.303Gadus_morhua
ENSFDAG00000006317CPSF39993.548ENSGALG00000016424CPSF310093.082Gallus_gallus
ENSFDAG00000006317CPSF39987.482ENSGAFG00000008016CPSF39887.482Gambusia_affinis
ENSFDAG00000006317CPSF39182.643ENSGAFG00000019449cpsf39982.643Gambusia_affinis
ENSFDAG00000006317CPSF36891.684ENSGAGG00000025583CPSF39391.684Gopherus_agassizii
ENSFDAG00000006317CPSF39994.978ENSGGOG00000001757CPSF39997.156Gorilla_gorilla
ENSFDAG00000006317CPSF35980.941ENSHBUG00000014332CPSF39980.941Haplochromis_burtoni
ENSFDAG00000006317CPSF39985.609ENSHBUG00000001188cpsf39985.609Haplochromis_burtoni
ENSFDAG00000006317CPSF39998.094ENSHGLG00000000666CPSF39998.094Heterocephalus_glaber_female
ENSFDAG00000006317CPSF39998.094ENSHGLG00100007765CPSF39998.094Heterocephalus_glaber_male
ENSFDAG00000006317CPSF39986.009ENSHCOG00000015957CPSF39786.009Hippocampus_comes
ENSFDAG00000006317CPSF39984.773ENSHCOG00000007251cpsf39984.773Hippocampus_comes
ENSFDAG00000006317CPSF39986.303ENSIPUG00000023488cpsf39886.303Ictalurus_punctatus
ENSFDAG00000006317CPSF39997.067ENSSTOG00000004476CPSF39997.067Ictidomys_tridecemlineatus
ENSFDAG00000006317CPSF39996.041ENSJJAG00000023415Cpsf39996.041Jaculus_jaculus
ENSFDAG00000006317CPSF39987.334ENSKMAG00000007317CPSF39887.334Kryptolebias_marmoratus
ENSFDAG00000006317CPSF39984.412ENSKMAG00000002806cpsf39884.412Kryptolebias_marmoratus
ENSFDAG00000006317CPSF39488.272ENSLBEG00000013492CPSF39888.272Labrus_bergylta
ENSFDAG00000006317CPSF35479.625ENSLBEG00000015018-9979.625Labrus_bergylta
ENSFDAG00000006317CPSF39979.039ENSLBEG00000020569cpsf39579.039Labrus_bergylta
ENSFDAG00000006317CPSF39982.916ENSLACG00000008308CPSF39882.916Latimeria_chalumnae
ENSFDAG00000006317CPSF39987.830ENSLOCG00000016823cpsf39887.830Lepisosteus_oculatus
ENSFDAG00000006317CPSF39895.870ENSLAFG00000009467CPSF39995.870Loxodonta_africana
ENSFDAG00000006317CPSF39997.214ENSMFAG00000001339CPSF39997.214Macaca_fascicularis
ENSFDAG00000006317CPSF39497.054ENSMMUG00000018038CPSF39997.054Macaca_mulatta
ENSFDAG00000006317CPSF39984.604ENSMNEG00000039447CPSF39984.604Macaca_nemestrina
ENSFDAG00000006317CPSF39997.361ENSMLEG00000026825CPSF39997.361Mandrillus_leucophaeus
ENSFDAG00000006317CPSF39184.628ENSMAMG00000008835CPSF39984.628Mastacembelus_armatus
ENSFDAG00000006317CPSF39985.420ENSMAMG00000003076cpsf39885.420Mastacembelus_armatus
ENSFDAG00000006317CPSF39988.218ENSMZEG00005006258CPSF39888.218Maylandia_zebra
ENSFDAG00000006317CPSF39985.609ENSMZEG00005014358cpsf39985.609Maylandia_zebra
ENSFDAG00000006317CPSF39793.835ENSMGAG00000013995CPSF39993.835Meleagris_gallopavo
ENSFDAG00000006317CPSF35493.583ENSMAUG00000000166Cpsf39993.583Mesocricetus_auratus
ENSFDAG00000006317CPSF39991.935ENSMICG00000002363CPSF39991.935Microcebus_murinus
ENSFDAG00000006317CPSF39992.669ENSMOCG00000020067Cpsf39992.669Microtus_ochrogaster
ENSFDAG00000006317CPSF39481.481ENSMMOG00000018212CPSF39881.481Mola_mola
ENSFDAG00000006317CPSF37971.779ENSMMOG00000011923CPSF38478.214Mola_mola
ENSFDAG00000006317CPSF39994.775ENSMODG00000014703CPSF39994.775Monodelphis_domestica
ENSFDAG00000006317CPSF39985.463ENSMALG00000016416cpsf39985.463Monopterus_albus
ENSFDAG00000006317CPSF39282.942ENSMALG00000011474CPSF39982.942Monopterus_albus
ENSFDAG00000006317CPSF39996.628MGP_CAROLIEiJ_G0017640Cpsf39996.628Mus_caroli
ENSFDAG00000006317CPSF39996.628ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSFDAG00000006317CPSF39996.481MGP_PahariEiJ_G0029397Cpsf39996.481Mus_pahari
ENSFDAG00000006317CPSF39996.628MGP_SPRETEiJ_G0018481Cpsf39996.628Mus_spretus
ENSFDAG00000006317CPSF39996.779ENSMPUG00000013213CPSF39996.779Mustela_putorius_furo
ENSFDAG00000006317CPSF39996.633ENSMLUG00000010636CPSF39996.633Myotis_lucifugus
ENSFDAG00000006317CPSF39996.921ENSNGAG00000019836Cpsf39996.921Nannospalax_galili
ENSFDAG00000006317CPSF39985.169ENSNBRG00000004770cpsf39985.169Neolamprologus_brichardi
ENSFDAG00000006317CPSF39186.010ENSNBRG00000010525CPSF39986.010Neolamprologus_brichardi
ENSFDAG00000006317CPSF39997.214ENSNLEG00000013359CPSF39997.214Nomascus_leucogenys
ENSFDAG00000006317CPSF39963.783ENSMEUG00000013117-9963.783Notamacropus_eugenii
ENSFDAG00000006317CPSF39987.701ENSOPRG00000008902CPSF39987.701Ochotona_princeps
ENSFDAG00000006317CPSF39997.801ENSODEG00000003129CPSF39997.801Octodon_degus
ENSFDAG00000006317CPSF39985.609ENSONIG00000018812cpsf39985.609Oreochromis_niloticus
ENSFDAG00000006317CPSF38294.484ENSOANG00000008577CPSF39994.484Ornithorhynchus_anatinus
ENSFDAG00000006317CPSF39996.921ENSOCUG00000003728CPSF39996.921Oryctolagus_cuniculus
ENSFDAG00000006317CPSF39983.260ENSORLG00000018854cpsf39983.260Oryzias_latipes
ENSFDAG00000006317CPSF39983.407ENSORLG00020013331cpsf39983.407Oryzias_latipes_hni
ENSFDAG00000006317CPSF39983.260ENSORLG00015011017cpsf39983.260Oryzias_latipes_hsok
ENSFDAG00000006317CPSF39983.407ENSOMEG00000010647cpsf39483.407Oryzias_melastigma
ENSFDAG00000006317CPSF39987.537ENSOGAG00000001680CPSF39987.537Otolemur_garnettii
ENSFDAG00000006317CPSF39997.507ENSOARG00000015073CPSF39997.507Ovis_aries
ENSFDAG00000006317CPSF39997.361ENSPPAG00000042457CPSF39997.361Pan_paniscus
ENSFDAG00000006317CPSF39997.214ENSPPRG00000016790CPSF39997.214Panthera_pardus
ENSFDAG00000006317CPSF39897.198ENSPTIG00000003920CPSF39997.198Panthera_tigris_altaica
ENSFDAG00000006317CPSF39997.361ENSPTRG00000011638CPSF39997.361Pan_troglodytes
ENSFDAG00000006317CPSF39997.067ENSPANG00000016798CPSF39997.067Papio_anubis
ENSFDAG00000006317CPSF39988.824ENSPKIG00000023646cpsf39988.527Paramormyrops_kingsleyae
ENSFDAG00000006317CPSF39992.500ENSPSIG00000016144CPSF39992.500Pelodiscus_sinensis
ENSFDAG00000006317CPSF35978.465ENSPMGG00000015311CPSF39978.465Periophthalmus_magnuspinnatus
ENSFDAG00000006317CPSF38285.166ENSPMGG00000006141-9985.166Periophthalmus_magnuspinnatus
ENSFDAG00000006317CPSF39996.334ENSPEMG00000017668Cpsf39996.334Peromyscus_maniculatus_bairdii
ENSFDAG00000006317CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSFDAG00000006317CPSF39795.789ENSPCIG00000009823CPSF39896.012Phascolarctos_cinereus
ENSFDAG00000006317CPSF39987.187ENSPFOG00000010418-9887.187Poecilia_formosa
ENSFDAG00000006317CPSF39984.288ENSPFOG00000015922cpsf39984.288Poecilia_formosa
ENSFDAG00000006317CPSF35979.506ENSPLAG00000021300-9979.506Poecilia_latipinna
ENSFDAG00000006317CPSF39984.288ENSPLAG00000000882cpsf39984.288Poecilia_latipinna
ENSFDAG00000006317CPSF39984.435ENSPMEG00000018309cpsf39984.435Poecilia_mexicana
ENSFDAG00000006317CPSF39182.166ENSPREG00000014875cpsf39982.166Poecilia_reticulata
ENSFDAG00000006317CPSF39982.180ENSPREG00000004482CPSF39882.180Poecilia_reticulata
ENSFDAG00000006317CPSF39992.815ENSPPYG00000012666CPSF39992.815Pongo_abelii
ENSFDAG00000006317CPSF39462.980ENSPCAG00000015042CPSF310062.980Procavia_capensis
ENSFDAG00000006317CPSF38988.215ENSPCOG00000023016CPSF39988.215Propithecus_coquereli
ENSFDAG00000006317CPSF39997.072ENSPVAG00000005324CPSF39997.072Pteropus_vampyrus
ENSFDAG00000006317CPSF39985.609ENSPNYG00000004405cpsf39985.609Pundamilia_nyererei
ENSFDAG00000006317CPSF37890.959ENSPNYG00000021047CPSF39090.959Pundamilia_nyererei
ENSFDAG00000006317CPSF39987.040ENSPNAG00000023060cpsf39887.040Pygocentrus_nattereri
ENSFDAG00000006317CPSF39996.628ENSRNOG00000052418Cpsf39996.628Rattus_norvegicus
ENSFDAG00000006317CPSF39991.349ENSRBIG00000041615CPSF39992.558Rhinopithecus_bieti
ENSFDAG00000006317CPSF39997.361ENSRROG00000033792CPSF39997.361Rhinopithecus_roxellana
ENSFDAG00000006317CPSF39340.537YLR277CYSH19540.537Saccharomyces_cerevisiae
ENSFDAG00000006317CPSF39990.988ENSSBOG00000027263CPSF39990.988Saimiri_boliviensis_boliviensis
ENSFDAG00000006317CPSF39996.041ENSSHAG00000007024CPSF39996.041Sarcophilus_harrisii
ENSFDAG00000006317CPSF39988.563ENSSFOG00015002108cpsf39988.563Scleropages_formosus
ENSFDAG00000006317CPSF39486.903ENSSMAG00000020534CPSF39586.903Scophthalmus_maximus
ENSFDAG00000006317CPSF39987.629ENSSDUG00000018498CPSF39887.629Seriola_dumerili
ENSFDAG00000006317CPSF39985.029ENSSDUG00000002828cpsf39785.029Seriola_dumerili
ENSFDAG00000006317CPSF39987.629ENSSLDG00000005234CPSF39887.629Seriola_lalandi_dorsalis
ENSFDAG00000006317CPSF39985.029ENSSLDG00000008469cpsf39785.029Seriola_lalandi_dorsalis
ENSFDAG00000006317CPSF39979.765ENSSARG00000005186CPSF39979.765Sorex_araneus
ENSFDAG00000006317CPSF39791.031ENSSPUG00000015525CPSF39791.031Sphenodon_punctatus
ENSFDAG00000006317CPSF39987.334ENSSPAG00000002906CPSF39887.334Stegastes_partitus
ENSFDAG00000006317CPSF39985.420ENSSPAG00000018579cpsf39885.420Stegastes_partitus
ENSFDAG00000006317CPSF39997.507ENSSSCG00000020799CPSF39997.507Sus_scrofa
ENSFDAG00000006317CPSF39994.109ENSTGUG00000013016CPSF39994.109Taeniopygia_guttata
ENSFDAG00000006317CPSF35971.990ENSTRUG00000013905CPSF39971.990Takifugu_rubripes
ENSFDAG00000006317CPSF39984.457ENSTRUG00000007030cpsf39784.457Takifugu_rubripes
ENSFDAG00000006317CPSF38493.425ENSTBEG00000002707CPSF38493.425Tupaia_belangeri
ENSFDAG00000006317CPSF38791.848ENSTTRG00000000861CPSF38791.848Tursiops_truncatus
ENSFDAG00000006317CPSF39597.565ENSUAMG00000007535CPSF39497.565Ursus_americanus
ENSFDAG00000006317CPSF39497.209ENSUMAG00000003676CPSF39997.209Ursus_maritimus
ENSFDAG00000006317CPSF39294.637ENSVPAG00000008041CPSF310094.637Vicugna_pacos
ENSFDAG00000006317CPSF39997.361ENSVVUG00000002194CPSF39997.361Vulpes_vulpes
ENSFDAG00000006317CPSF39989.165ENSXETG00000008263cpsf39989.165Xenopus_tropicalis
ENSFDAG00000006317CPSF35478.167ENSXCOG00000000957-8778.167Xiphophorus_couchianus
ENSFDAG00000006317CPSF39984.457ENSXCOG00000019695cpsf39984.457Xiphophorus_couchianus
ENSFDAG00000006317CPSF39984.141ENSXMAG00000009784cpsf39984.141Xiphophorus_maculatus
ENSFDAG00000006317CPSF39987.187ENSXMAG00000027291CPSF39887.187Xiphophorus_maculatus

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