EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000006342 (Gene tree)
Gene ID: 104872749
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 15520 bases
Position: chrKN123067.1:640578-656097
Accession: 104872749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000005074	TRM13	PF05206.14	7.5e-92	1	1
ENSFDAP00000005074	zf-U11-48K	PF05253.12	2e-09	1	1
ENSFDAP00000005074	zf-TRM13_CCCH	PF11722.8	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018558	TRMT13-201	1449	XM_010639064	ENSFDAP00000005074	483 (aa)	XP_010637366	-

Gene Model

Click here to download ENSFDAG00000006342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006342	TRMT13	99	90.336	ENSG00000122435	TRMT13	99	90.336	Homo_sapiens
ENSFDAG00000006342	TRMT13	95	47.515	ENSAPOG00000015131	trmt13	99	47.992	Acanthochromis_polyacanthus
ENSFDAG00000006342	TRMT13	99	88.025	ENSAMEG00000008917	TRMT13	99	88.025	Ailuropoda_melanoleuca
ENSFDAG00000006342	TRMT13	98	50.309	ENSACIG00000005804	trmt13	96	49.482	Amphilophus_citrinellus
ENSFDAG00000006342	TRMT13	95	48.394	ENSAOCG00000023585	trmt13	99	48.394	Amphiprion_ocellaris
ENSFDAG00000006342	TRMT13	95	48.310	ENSAPEG00000004025	trmt13	99	48.310	Amphiprion_percula
ENSFDAG00000006342	TRMT13	95	50.851	ENSATEG00000006597	trmt13	96	50.426	Anabas_testudineus
ENSFDAG00000006342	TRMT13	87	66.901	ENSAPLG00000014924	TRMT13	99	66.901	Anas_platyrhynchos
ENSFDAG00000006342	TRMT13	97	62.208	ENSACAG00000003498	TRMT13	99	62.208	Anolis_carolinensis
ENSFDAG00000006342	TRMT13	99	90.966	ENSANAG00000019525	TRMT13	100	90.826	Aotus_nancymaae
ENSFDAG00000006342	TRMT13	96	52.966	ENSACLG00000020018	trmt13	99	52.966	Astatotilapia_calliptera
ENSFDAG00000006342	TRMT13	95	54.915	ENSAMXG00000017963	trmt13	98	55.342	Astyanax_mexicanus
ENSFDAG00000006342	TRMT13	99	88.655	ENSBTAG00000015781	TRMT13	99	88.655	Bos_taurus
ENSFDAG00000006342	TRMT13	99	90.126	ENSCJAG00000000200	TRMT13	99	90.826	Callithrix_jacchus
ENSFDAG00000006342	TRMT13	65	88.571	ENSCAFG00000020021	TRMT13	99	88.571	Canis_familiaris
ENSFDAG00000006342	TRMT13	57	91.273	ENSCAFG00020011572	TRMT13	95	91.273	Canis_lupus_dingo
ENSFDAG00000006342	TRMT13	98	89.474	ENSCHIG00000015395	TRMT13	99	89.474	Capra_hircus
ENSFDAG00000006342	TRMT13	96	80.860	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSFDAG00000006342	TRMT13	75	73.003	ENSCAPG00000009085	TRMT13	100	73.554	Cavia_aperea
ENSFDAG00000006342	TRMT13	98	94.316	ENSCPOG00000000694	TRMT13	99	94.316	Cavia_porcellus
ENSFDAG00000006342	TRMT13	99	90.756	ENSCCAG00000023772	TRMT13	100	89.908	Cebus_capucinus
ENSFDAG00000006342	TRMT13	99	90.756	ENSCATG00000033556	TRMT13	100	90.826	Cercocebus_atys
ENSFDAG00000006342	TRMT13	87	87.678	ENSCLAG00000008220	TRMT13	99	88.389	Chinchilla_lanigera
ENSFDAG00000006342	TRMT13	99	90.966	ENSCSAG00000001506	TRMT13	99	90.966	Chlorocebus_sabaeus
ENSFDAG00000006342	TRMT13	98	68.842	ENSCPBG00000026671	TRMT13	99	68.842	Chrysemys_picta_bellii
ENSFDAG00000006342	TRMT13	99	91.176	ENSCANG00000034659	TRMT13	100	91.743	Colobus_angolensis_palliatus
ENSFDAG00000006342	TRMT13	98	85.684	ENSCGRG00001021601	Trmt13	99	85.684	Cricetulus_griseus_chok1gshd
ENSFDAG00000006342	TRMT13	53	82.745	ENSCGRG00000000093	-	98	82.745	Cricetulus_griseus_crigri
ENSFDAG00000006342	TRMT13	97	47.447	ENSCSEG00000000591	trmt13	99	47.447	Cynoglossus_semilaevis
ENSFDAG00000006342	TRMT13	95	48.632	ENSCVAG00000017342	trmt13	93	49.156	Cyprinodon_variegatus
ENSFDAG00000006342	TRMT13	95	57.204	ENSDARG00000102846	trmt13	96	57.204	Danio_rerio
ENSFDAG00000006342	TRMT13	56	88.768	ENSDNOG00000001710	TRMT13	84	88.768	Dasypus_novemcinctus
ENSFDAG00000006342	TRMT13	99	88.445	ENSDORG00000015808	Trmt13	99	88.445	Dipodomys_ordii
ENSFDAG00000006342	TRMT13	95	31.303	FBgn0037435	CG18048	94	31.303	Drosophila_melanogaster
ENSFDAG00000006342	TRMT13	98	74.530	ENSETEG00000005819	TRMT13	99	74.530	Echinops_telfairi
ENSFDAG00000006342	TRMT13	94	46.336	ENSEBUG00000014444	trmt13	96	46.336	Eptatretus_burgeri
ENSFDAG00000006342	TRMT13	98	90.947	ENSEASG00005015918	TRMT13	99	90.947	Equus_asinus_asinus
ENSFDAG00000006342	TRMT13	98	90.526	ENSECAG00000022626	TRMT13	99	90.526	Equus_caballus
ENSFDAG00000006342	TRMT13	78	79.430	ENSEEUG00000000294	TRMT13	78	79.430	Erinaceus_europaeus
ENSFDAG00000006342	TRMT13	95	55.342	ENSELUG00000003803	trmt13	98	55.579	Esox_lucius
ENSFDAG00000006342	TRMT13	99	90.966	ENSFCAG00000030618	TRMT13	100	94.495	Felis_catus
ENSFDAG00000006342	TRMT13	98	63.694	ENSFALG00000002424	TRMT13	98	63.694	Ficedula_albicollis
ENSFDAG00000006342	TRMT13	77	52.344	ENSFHEG00000022954	trmt13	98	51.238	Fundulus_heteroclitus
ENSFDAG00000006342	TRMT13	94	48.791	ENSGMOG00000013223	trmt13	100	49.231	Gadus_morhua
ENSFDAG00000006342	TRMT13	96	65.733	ENSGALG00000005290	TRMT13	98	65.745	Gallus_gallus
ENSFDAG00000006342	TRMT13	75	51.613	ENSGAFG00000001577	trmt13	81	51.613	Gambusia_affinis
ENSFDAG00000006342	TRMT13	98	50.418	ENSGACG00000013428	trmt13	100	51.046	Gasterosteus_aculeatus
ENSFDAG00000006342	TRMT13	98	70.168	ENSGAGG00000023303	TRMT13	99	73.091	Gopherus_agassizii
ENSFDAG00000006342	TRMT13	99	90.126	ENSGGOG00000005616	TRMT13	99	90.126	Gorilla_gorilla
ENSFDAG00000006342	TRMT13	96	53.390	ENSHBUG00000007754	trmt13	99	53.390	Haplochromis_burtoni
ENSFDAG00000006342	TRMT13	99	96.058	ENSHGLG00000002164	TRMT13	99	96.058	Heterocephalus_glaber_female
ENSFDAG00000006342	TRMT13	99	96.058	ENSHGLG00100001618	TRMT13	99	96.058	Heterocephalus_glaber_male
ENSFDAG00000006342	TRMT13	98	46.203	ENSHCOG00000020553	trmt13	98	46.203	Hippocampus_comes
ENSFDAG00000006342	TRMT13	98	56.051	ENSIPUG00000024787	trmt13	99	56.476	Ictalurus_punctatus
ENSFDAG00000006342	TRMT13	99	92.662	ENSSTOG00000013483	TRMT13	99	92.662	Ictidomys_tridecemlineatus
ENSFDAG00000006342	TRMT13	99	86.555	ENSJJAG00000018012	Trmt13	99	86.555	Jaculus_jaculus
ENSFDAG00000006342	TRMT13	64	49.367	ENSKMAG00000007639	trmt13	92	49.367	Kryptolebias_marmoratus
ENSFDAG00000006342	TRMT13	96	50.000	ENSLBEG00000020238	trmt13	99	50.000	Labrus_bergylta
ENSFDAG00000006342	TRMT13	96	61.915	ENSLACG00000013153	TRMT13	99	61.347	Latimeria_chalumnae
ENSFDAG00000006342	TRMT13	97	57.505	ENSLOCG00000000418	trmt13	99	57.537	Lepisosteus_oculatus
ENSFDAG00000006342	TRMT13	76	85.326	ENSLAFG00000002383	TRMT13	99	85.326	Loxodonta_africana
ENSFDAG00000006342	TRMT13	99	90.756	ENSMFAG00000034681	TRMT13	100	91.743	Macaca_fascicularis
ENSFDAG00000006342	TRMT13	99	90.756	ENSMMUG00000004243	TRMT13	100	91.743	Macaca_mulatta
ENSFDAG00000006342	TRMT13	99	90.756	ENSMNEG00000036102	TRMT13	100	91.743	Macaca_nemestrina
ENSFDAG00000006342	TRMT13	99	91.176	ENSMLEG00000034258	TRMT13	100	92.661	Mandrillus_leucophaeus
ENSFDAG00000006342	TRMT13	96	50.000	ENSMAMG00000016597	trmt13	97	50.000	Mastacembelus_armatus
ENSFDAG00000006342	TRMT13	96	52.754	ENSMZEG00005020959	trmt13	99	52.754	Maylandia_zebra
ENSFDAG00000006342	TRMT13	88	67.139	ENSMGAG00000006970	TRMT13	99	67.139	Meleagris_gallopavo
ENSFDAG00000006342	TRMT13	99	84.728	ENSMAUG00000010448	Trmt13	99	84.728	Mesocricetus_auratus
ENSFDAG00000006342	TRMT13	99	91.597	ENSMICG00000005283	TRMT13	100	93.578	Microcebus_murinus
ENSFDAG00000006342	TRMT13	99	81.705	ENSMOCG00000019914	Trmt13	100	81.705	Microtus_ochrogaster
ENSFDAG00000006342	TRMT13	54	51.698	ENSMMOG00000007762	trmt13	89	51.698	Mola_mola
ENSFDAG00000006342	TRMT13	99	76.715	ENSMODG00000003646	TRMT13	99	76.715	Monodelphis_domestica
ENSFDAG00000006342	TRMT13	99	48.963	ENSMALG00000020965	trmt13	99	48.963	Monopterus_albus
ENSFDAG00000006342	TRMT13	99	86.013	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.262	Mus_caroli
ENSFDAG00000006342	TRMT13	99	85.595	ENSMUSG00000033439	Trmt13	94	92.262	Mus_musculus
ENSFDAG00000006342	TRMT13	99	86.639	MGP_PahariEiJ_G0027014	Trmt13	93	92.771	Mus_pahari
ENSFDAG00000006342	TRMT13	99	85.804	MGP_SPRETEiJ_G0026518	Trmt13	94	92.262	Mus_spretus
ENSFDAG00000006342	TRMT13	78	86.702	ENSMPUG00000002078	-	99	86.702	Mustela_putorius_furo
ENSFDAG00000006342	TRMT13	98	79.114	ENSMLUG00000002124	TRMT13	99	79.114	Myotis_lucifugus
ENSFDAG00000006342	TRMT13	98	47.423	ENSNBRG00000006783	trmt13	97	49.786	Neolamprologus_brichardi
ENSFDAG00000006342	TRMT13	99	90.126	ENSNLEG00000035917	TRMT13	99	90.126	Nomascus_leucogenys
ENSFDAG00000006342	TRMT13	51	72.984	ENSMEUG00000013346	-	100	72.984	Notamacropus_eugenii
ENSFDAG00000006342	TRMT13	66	90.809	ENSOPRG00000012048	TRMT13	66	90.809	Ochotona_princeps
ENSFDAG00000006342	TRMT13	96	53.178	ENSONIG00000004574	trmt13	99	53.178	Oreochromis_niloticus
ENSFDAG00000006342	TRMT13	89	72.494	ENSOANG00000012057	TRMT13	99	72.494	Ornithorhynchus_anatinus
ENSFDAG00000006342	TRMT13	99	89.099	ENSOCUG00000023095	TRMT13	99	89.099	Oryctolagus_cuniculus
ENSFDAG00000006342	TRMT13	97	46.667	ENSORLG00000003320	trmt13	99	47.292	Oryzias_latipes
ENSFDAG00000006342	TRMT13	96	47.660	ENSORLG00020005972	trmt13	98	47.009	Oryzias_latipes_hni
ENSFDAG00000006342	TRMT13	97	50.833	ENSORLG00015002270	trmt13	99	50.833	Oryzias_latipes_hsok
ENSFDAG00000006342	TRMT13	97	51.042	ENSOMEG00000006724	trmt13	95	51.368	Oryzias_melastigma
ENSFDAG00000006342	TRMT13	98	91.755	ENSOGAG00000005618	TRMT13	96	91.807	Otolemur_garnettii
ENSFDAG00000006342	TRMT13	98	89.474	ENSOARG00000017983	TRMT13	99	89.474	Ovis_aries
ENSFDAG00000006342	TRMT13	99	89.706	ENSPPAG00000043736	TRMT13	99	89.706	Pan_paniscus
ENSFDAG00000006342	TRMT13	99	90.966	ENSPPRG00000003424	TRMT13	100	94.495	Panthera_pardus
ENSFDAG00000006342	TRMT13	99	90.966	ENSPTIG00000018598	TRMT13	100	94.495	Panthera_tigris_altaica
ENSFDAG00000006342	TRMT13	99	89.706	ENSPTRG00000001001	TRMT13	99	89.706	Pan_troglodytes
ENSFDAG00000006342	TRMT13	99	91.176	ENSPANG00000007598	TRMT13	100	91.743	Papio_anubis
ENSFDAG00000006342	TRMT13	95	55.652	ENSPKIG00000001514	trmt13	98	55.652	Paramormyrops_kingsleyae
ENSFDAG00000006342	TRMT13	86	69.544	ENSPSIG00000012703	TRMT13	99	69.544	Pelodiscus_sinensis
ENSFDAG00000006342	TRMT13	98	50.105	ENSPMGG00000013298	trmt13	96	50.105	Periophthalmus_magnuspinnatus
ENSFDAG00000006342	TRMT13	99	84.519	ENSPEMG00000000275	Trmt13	99	84.519	Peromyscus_maniculatus_bairdii
ENSFDAG00000006342	TRMT13	94	45.781	ENSPMAG00000000823	trmt13	100	44.969	Petromyzon_marinus
ENSFDAG00000006342	TRMT13	98	76.681	ENSPCIG00000007699	TRMT13	99	77.311	Phascolarctos_cinereus
ENSFDAG00000006342	TRMT13	96	49.028	ENSPFOG00000008675	trmt13	96	49.028	Poecilia_formosa
ENSFDAG00000006342	TRMT13	95	48.723	ENSPLAG00000009709	trmt13	99	48.723	Poecilia_latipinna
ENSFDAG00000006342	TRMT13	95	47.660	ENSPMEG00000022954	trmt13	99	47.660	Poecilia_mexicana
ENSFDAG00000006342	TRMT13	76	50.923	ENSPREG00000005645	trmt13	91	49.822	Poecilia_reticulata
ENSFDAG00000006342	TRMT13	99	90.126	ENSPPYG00000001120	TRMT13	99	90.126	Pongo_abelii
ENSFDAG00000006342	TRMT13	99	86.458	ENSPCAG00000002340	TRMT13	99	86.458	Procavia_capensis
ENSFDAG00000006342	TRMT13	99	91.176	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSFDAG00000006342	TRMT13	98	89.895	ENSPVAG00000017430	TRMT13	99	89.895	Pteropus_vampyrus
ENSFDAG00000006342	TRMT13	96	51.483	ENSPNYG00000013690	trmt13	99	51.483	Pundamilia_nyererei
ENSFDAG00000006342	TRMT13	98	54.737	ENSPNAG00000022130	trmt13	100	54.737	Pygocentrus_nattereri
ENSFDAG00000006342	TRMT13	99	85.595	ENSRNOG00000015140	Trmt13	97	85.595	Rattus_norvegicus
ENSFDAG00000006342	TRMT13	99	91.176	ENSRBIG00000037686	TRMT13	100	91.743	Rhinopithecus_bieti
ENSFDAG00000006342	TRMT13	99	91.176	ENSRROG00000044057	TRMT13	100	91.743	Rhinopithecus_roxellana
ENSFDAG00000006342	TRMT13	99	90.546	ENSSBOG00000026541	TRMT13	100	90.826	Saimiri_boliviensis_boliviensis
ENSFDAG00000006342	TRMT13	89	77.315	ENSSHAG00000005213	TRMT13	96	77.315	Sarcophilus_harrisii
ENSFDAG00000006342	TRMT13	96	54.043	ENSSFOG00015017560	trmt13	98	54.194	Scleropages_formosus
ENSFDAG00000006342	TRMT13	97	50.103	ENSSMAG00000014592	trmt13	98	50.103	Scophthalmus_maximus
ENSFDAG00000006342	TRMT13	97	48.980	ENSSDUG00000015508	trmt13	98	49.091	Seriola_dumerili
ENSFDAG00000006342	TRMT13	97	50.000	ENSSLDG00000019060	trmt13	98	50.000	Seriola_lalandi_dorsalis
ENSFDAG00000006342	TRMT13	99	75.417	ENSSARG00000010344	TRMT13	99	75.417	Sorex_araneus
ENSFDAG00000006342	TRMT13	95	68.490	ENSSPUG00000016339	TRMT13	99	68.490	Sphenodon_punctatus
ENSFDAG00000006342	TRMT13	94	52.052	ENSSPAG00000011922	trmt13	98	52.137	Stegastes_partitus
ENSFDAG00000006342	TRMT13	99	89.916	ENSSSCG00000006869	TRMT13	99	89.916	Sus_scrofa
ENSFDAG00000006342	TRMT13	95	66.157	ENSTGUG00000005253	TRMT13	98	66.157	Taeniopygia_guttata
ENSFDAG00000006342	TRMT13	95	49.260	ENSTRUG00000008400	trmt13	99	49.061	Takifugu_rubripes
ENSFDAG00000006342	TRMT13	85	73.236	ENSTBEG00000008911	TRMT13	99	73.236	Tupaia_belangeri
ENSFDAG00000006342	TRMT13	51	97.368	ENSTTRG00000015302	-	60	97.368	Tursiops_truncatus
ENSFDAG00000006342	TRMT13	99	82.983	ENSUAMG00000017251	TRMT13	99	82.983	Ursus_americanus
ENSFDAG00000006342	TRMT13	99	88.235	ENSUMAG00000007901	TRMT13	99	88.525	Ursus_maritimus
ENSFDAG00000006342	TRMT13	89	72.196	ENSVPAG00000001034	TRMT13	99	72.196	Vicugna_pacos
ENSFDAG00000006342	TRMT13	99	89.004	ENSVVUG00000021996	TRMT13	100	89.004	Vulpes_vulpes
ENSFDAG00000006342	TRMT13	98	55.626	ENSXETG00000013204	trmt13	99	55.626	Xenopus_tropicalis
ENSFDAG00000006342	TRMT13	95	47.669	ENSXMAG00000010765	trmt13	99	47.669	Xiphophorus_maculatus