EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000006406 (Gene tree)
Gene ID: 104861985
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 67258 bases
Position: chrKN122084.1:1676384-1743641
Accession: 104861985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000006601	La	PF05383.17	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000029414	-	2539	XM_010623674	ENSFDAP00000006601	723 (aa)	XP_010621976	UPI00053FC76A

Gene Model

Click here to download ENSFDAG00000006406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000006406	-	99	38.472	ENSFDAG00000006158	LARP4B	90	37.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006406	-	100	86.188	ENSG00000161813	LARP4	100	88.800	Homo_sapiens
ENSFDAG00000006406	-	99	45.872	ENSAPOG00000021331	larp4ab	99	45.538	Acanthochromis_polyacanthus
ENSFDAG00000006406	-	99	51.299	ENSAPOG00000007142	larp4aa	95	50.259	Acanthochromis_polyacanthus
ENSFDAG00000006406	-	99	86.685	ENSAMEG00000001275	LARP4	100	86.685	Ailuropoda_melanoleuca
ENSFDAG00000006406	-	53	62.051	ENSACIG00000001198	larp4aa	77	82.014	Amphilophus_citrinellus
ENSFDAG00000006406	-	99	45.310	ENSAOCG00000006387	larp4ab	99	44.841	Amphiprion_ocellaris
ENSFDAG00000006406	-	51	60.858	ENSAPEG00000015441	larp4ab	98	60.858	Amphiprion_percula
ENSFDAG00000006406	-	99	49.413	ENSATEG00000020715	larp4aa	95	48.240	Anabas_testudineus
ENSFDAG00000006406	-	99	43.918	ENSATEG00000001018	larp4ab	99	44.747	Anabas_testudineus
ENSFDAG00000006406	-	99	69.357	ENSAPLG00000013661	LARP4	99	68.947	Anas_platyrhynchos
ENSFDAG00000006406	-	100	64.626	ENSACAG00000017133	LARP4	97	64.674	Anolis_carolinensis
ENSFDAG00000006406	-	100	84.405	ENSANAG00000029342	LARP4	100	87.361	Aotus_nancymaae
ENSFDAG00000006406	-	53	61.954	ENSACLG00000002575	larp4aa	95	48.454	Astatotilapia_calliptera
ENSFDAG00000006406	-	51	55.875	ENSACLG00000000777	larp4ab	99	55.875	Astatotilapia_calliptera
ENSFDAG00000006406	-	99	46.433	ENSAMXG00000001515	larp4ab	95	47.532	Astyanax_mexicanus
ENSFDAG00000006406	-	99	50.128	ENSAMXG00000036493	larp4aa	94	50.256	Astyanax_mexicanus
ENSFDAG00000006406	-	100	85.170	ENSBTAG00000017164	LARP4	100	85.170	Bos_taurus
ENSFDAG00000006406	-	100	85.103	ENSCJAG00000021131	LARP4	100	88.476	Callithrix_jacchus
ENSFDAG00000006406	-	100	86.740	ENSCAFG00000008174	LARP4	100	86.722	Canis_familiaris
ENSFDAG00000006406	-	99	87.344	ENSCAFG00020014554	LARP4	100	86.981	Canis_lupus_dingo
ENSFDAG00000006406	-	100	84.898	ENSCHIG00000025965	LARP4	100	84.898	Capra_hircus
ENSFDAG00000006406	-	100	87.448	ENSTSYG00000004342	LARP4	100	87.448	Carlito_syrichta
ENSFDAG00000006406	-	98	71.629	ENSCAPG00000012942	LARP4	100	71.067	Cavia_aperea
ENSFDAG00000006406	-	100	85.477	ENSCPOG00000020519	LARP4	100	85.477	Cavia_porcellus
ENSFDAG00000006406	-	100	84.669	ENSCCAG00000024439	LARP4	100	87.732	Cebus_capucinus
ENSFDAG00000006406	-	99	84.840	ENSCATG00000044528	LARP4	100	84.840	Cercocebus_atys
ENSFDAG00000006406	-	99	90.305	ENSCLAG00000001829	LARP4	100	90.305	Chinchilla_lanigera
ENSFDAG00000006406	-	57	85.821	ENSCHOG00000010490	-	58	85.821	Choloepus_hoffmanni
ENSFDAG00000006406	-	100	70.708	ENSCPBG00000019407	LARP4	91	70.436	Chrysemys_picta_bellii
ENSFDAG00000006406	-	100	86.897	ENSCANG00000029159	-	100	89.591	Colobus_angolensis_palliatus
ENSFDAG00000006406	-	100	77.486	ENSCANG00000033097	-	100	79.699	Colobus_angolensis_palliatus
ENSFDAG00000006406	-	100	83.978	ENSCGRG00001010818	Larp4	100	83.978	Cricetulus_griseus_chok1gshd
ENSFDAG00000006406	-	99	83.844	ENSCGRG00000009382	Larp4	100	83.844	Cricetulus_griseus_crigri
ENSFDAG00000006406	-	58	53.950	ENSCSEG00000003240	larp4ab	94	43.644	Cynoglossus_semilaevis
ENSFDAG00000006406	-	99	49.481	ENSCVAG00000005488	larp4aa	95	48.182	Cyprinodon_variegatus
ENSFDAG00000006406	-	99	47.970	ENSDARG00000078401	larp4aa	95	48.153	Danio_rerio
ENSFDAG00000006406	-	100	47.898	ENSDARG00000074979	larp4ab	85	77.483	Danio_rerio
ENSFDAG00000006406	-	100	84.690	ENSDNOG00000038525	LARP4	100	84.690	Dasypus_novemcinctus
ENSFDAG00000006406	-	100	86.030	ENSDORG00000004013	Larp4	100	86.030	Dipodomys_ordii
ENSFDAG00000006406	-	72	75.472	ENSETEG00000011683	LARP4	73	75.472	Echinops_telfairi
ENSFDAG00000006406	-	76	40.436	ENSEBUG00000004426	LARP4	62	49.185	Eptatretus_burgeri
ENSFDAG00000006406	-	73	41.113	ENSEBUG00000010394	LARP4	89	37.755	Eptatretus_burgeri
ENSFDAG00000006406	-	99	85.457	ENSEASG00005004356	LARP4	100	90.517	Equus_asinus_asinus
ENSFDAG00000006406	-	100	88.138	ENSECAG00000012479	LARP4	100	88.138	Equus_caballus
ENSFDAG00000006406	-	76	95.726	ENSEEUG00000000316	LARP4	76	95.726	Erinaceus_europaeus
ENSFDAG00000006406	-	99	46.325	ENSELUG00000018650	larp4ab	85	74.043	Esox_lucius
ENSFDAG00000006406	-	99	44.863	ENSELUG00000000395	larp4aa	85	60.950	Esox_lucius
ENSFDAG00000006406	-	100	87.724	ENSFCAG00000031897	LARP4	97	90.909	Felis_catus
ENSFDAG00000006406	-	86	66.614	ENSFALG00000002114	LARP4	98	67.752	Ficedula_albicollis
ENSFDAG00000006406	-	99	44.195	ENSFHEG00000013854	larp4ab	99	43.536	Fundulus_heteroclitus
ENSFDAG00000006406	-	99	48.787	ENSFHEG00000004338	larp4aa	95	48.977	Fundulus_heteroclitus
ENSFDAG00000006406	-	99	49.025	ENSGMOG00000008246	larp4aa	95	48.172	Gadus_morhua
ENSFDAG00000006406	-	95	68.286	ENSGALG00000042122	LARP4	93	67.857	Gallus_gallus
ENSFDAG00000006406	-	99	44.238	ENSGAFG00000021777	larp4ab	99	43.709	Gambusia_affinis
ENSFDAG00000006406	-	99	49.801	ENSGACG00000008381	larp4aa	99	63.757	Gasterosteus_aculeatus
ENSFDAG00000006406	-	99	45.635	ENSGACG00000000680	larp4ab	99	45.897	Gasterosteus_aculeatus
ENSFDAG00000006406	-	100	69.619	ENSGAGG00000006969	LARP4	100	69.346	Gopherus_agassizii
ENSFDAG00000006406	-	99	80.913	ENSGGOG00000015230	LARP4	99	89.218	Gorilla_gorilla
ENSFDAG00000006406	-	53	61.954	ENSHBUG00000023074	larp4aa	95	48.752	Haplochromis_burtoni
ENSFDAG00000006406	-	85	85.761	ENSHGLG00000013875	-	100	84.628	Heterocephalus_glaber_female
ENSFDAG00000006406	-	63	71.082	ENSHGLG00000010979	-	93	78.685	Heterocephalus_glaber_female
ENSFDAG00000006406	-	91	92.133	ENSHGLG00000005513	-	100	92.133	Heterocephalus_glaber_female
ENSFDAG00000006406	-	63	71.082	ENSHGLG00100002832	-	93	78.685	Heterocephalus_glaber_male
ENSFDAG00000006406	-	99	86.584	ENSHGLG00100011678	-	100	85.615	Heterocephalus_glaber_male
ENSFDAG00000006406	-	100	92.297	ENSHGLG00100016984	-	100	92.297	Heterocephalus_glaber_male
ENSFDAG00000006406	-	99	42.246	ENSHCOG00000020857	larp4ab	99	42.112	Hippocampus_comes
ENSFDAG00000006406	-	99	48.450	ENSHCOG00000015951	larp4aa	95	48.249	Hippocampus_comes
ENSFDAG00000006406	-	100	46.237	ENSIPUG00000021659	larp4ab	100	46.185	Ictalurus_punctatus
ENSFDAG00000006406	-	99	48.597	ENSIPUG00000007514	larp4aa	95	49.045	Ictalurus_punctatus
ENSFDAG00000006406	-	100	87.569	ENSSTOG00000003553	LARP4	100	87.569	Ictidomys_tridecemlineatus
ENSFDAG00000006406	-	52	66.842	ENSJJAG00000014649	-	95	85.238	Jaculus_jaculus
ENSFDAG00000006406	-	99	45.778	ENSKMAG00000018556	larp4ab	99	45.418	Kryptolebias_marmoratus
ENSFDAG00000006406	-	99	44.271	ENSLBEG00000019306	larp4ab	100	44.416	Labrus_bergylta
ENSFDAG00000006406	-	99	48.412	ENSLBEG00000014537	larp4aa	94	47.903	Labrus_bergylta
ENSFDAG00000006406	-	99	58.255	ENSLACG00000019090	LARP4	99	57.450	Latimeria_chalumnae
ENSFDAG00000006406	-	99	52.375	ENSLOCG00000007113	larp4ab	95	52.639	Lepisosteus_oculatus
ENSFDAG00000006406	-	100	85.773	ENSLAFG00000005160	LARP4	100	85.773	Loxodonta_africana
ENSFDAG00000006406	-	99	86.842	ENSMFAG00000043681	LARP4	100	89.963	Macaca_fascicularis
ENSFDAG00000006406	-	100	86.457	ENSMMUG00000008172	LARP4	100	89.963	Macaca_mulatta
ENSFDAG00000006406	-	93	87.164	ENSMNEG00000034602	LARP4	100	85.344	Macaca_nemestrina
ENSFDAG00000006406	-	87	69.554	ENSMNEG00000037799	-	99	72.043	Macaca_nemestrina
ENSFDAG00000006406	-	100	87.034	ENSMLEG00000039661	LARP4	100	89.591	Mandrillus_leucophaeus
ENSFDAG00000006406	-	99	44.502	ENSMAMG00000002616	larp4ab	99	44.502	Mastacembelus_armatus
ENSFDAG00000006406	-	99	49.035	ENSMAMG00000011206	larp4aa	95	49.035	Mastacembelus_armatus
ENSFDAG00000006406	-	99	47.680	ENSMZEG00005001813	larp4aa	95	48.454	Maylandia_zebra
ENSFDAG00000006406	-	51	55.875	ENSMZEG00005007771	larp4ab	99	55.875	Maylandia_zebra
ENSFDAG00000006406	-	95	68.188	ENSMGAG00000010598	LARP4	93	67.760	Meleagris_gallopavo
ENSFDAG00000006406	-	87	87.322	ENSMICG00000012388	-	99	87.322	Microcebus_murinus
ENSFDAG00000006406	-	99	81.755	ENSMICG00000030156	-	99	81.755	Microcebus_murinus
ENSFDAG00000006406	-	100	83.149	ENSMOCG00000020635	Larp4	100	83.149	Microtus_ochrogaster
ENSFDAG00000006406	-	99	48.370	ENSMMOG00000004785	larp4aa	95	47.849	Mola_mola
ENSFDAG00000006406	-	100	43.433	ENSMMOG00000021861	larp4ab	94	53.439	Mola_mola
ENSFDAG00000006406	-	95	73.706	MGP_CAROLIEiJ_G0020281	Larp4	85	89.091	Mus_caroli
ENSFDAG00000006406	-	100	84.807	ENSMUSG00000023025	Larp4	100	84.894	Mus_musculus
ENSFDAG00000006406	-	100	85.221	MGP_PahariEiJ_G0020284	Larp4	100	85.221	Mus_pahari
ENSFDAG00000006406	-	99	87.204	ENSMPUG00000008706	LARP4	96	87.204	Mustela_putorius_furo
ENSFDAG00000006406	-	100	83.356	ENSMLUG00000012513	-	100	83.356	Myotis_lucifugus
ENSFDAG00000006406	-	100	83.425	ENSNGAG00000001577	-	100	83.425	Nannospalax_galili
ENSFDAG00000006406	-	99	47.059	ENSNBRG00000011292	larp4aa	95	47.570	Neolamprologus_brichardi
ENSFDAG00000006406	-	51	55.497	ENSNBRG00000015675	larp4ab	99	55.497	Neolamprologus_brichardi
ENSFDAG00000006406	-	100	86.878	ENSNLEG00000017798	LARP4	100	88.848	Nomascus_leucogenys
ENSFDAG00000006406	-	67	74.059	ENSOPRG00000004592	-	80	74.059	Ochotona_princeps
ENSFDAG00000006406	-	99	86.471	ENSODEG00000009770	LARP4	100	86.471	Octodon_degus
ENSFDAG00000006406	-	100	43.857	ENSONIG00000019124	larp4ab	100	43.915	Oreochromis_niloticus
ENSFDAG00000006406	-	100	48.512	ENSONIG00000011895	larp4aa	99	48.182	Oreochromis_niloticus
ENSFDAG00000006406	-	73	71.402	ENSOANG00000004373	LARP4	97	70.849	Ornithorhynchus_anatinus
ENSFDAG00000006406	-	100	85.241	ENSOCUG00000021417	-	100	85.241	Oryctolagus_cuniculus
ENSFDAG00000006406	-	100	83.884	ENSOCUG00000026872	-	99	83.884	Oryctolagus_cuniculus
ENSFDAG00000006406	-	99	49.740	ENSORLG00000006758	larp4aa	95	49.219	Oryzias_latipes
ENSFDAG00000006406	-	99	49.544	ENSORLG00020010258	larp4aa	95	49.022	Oryzias_latipes_hni
ENSFDAG00000006406	-	99	49.869	ENSORLG00015002292	larp4aa	95	49.347	Oryzias_latipes_hsok
ENSFDAG00000006406	-	99	50.134	ENSOMEG00000019749	larp4aa	97	66.120	Oryzias_melastigma
ENSFDAG00000006406	-	71	85.659	ENSOGAG00000001415	LARP4	99	85.659	Otolemur_garnettii
ENSFDAG00000006406	-	100	84.332	ENSOARG00000017702	LARP4	99	84.332	Ovis_aries
ENSFDAG00000006406	-	63	69.757	ENSPPAG00000039122	-	96	74.453	Pan_paniscus
ENSFDAG00000006406	-	90	87.982	ENSPPAG00000035100	LARP4	97	89.305	Pan_paniscus
ENSFDAG00000006406	-	100	87.724	ENSPPRG00000004522	LARP4	97	90.909	Panthera_pardus
ENSFDAG00000006406	-	100	87.724	ENSPTIG00000015617	LARP4	97	90.909	Panthera_tigris_altaica
ENSFDAG00000006406	-	100	86.345	ENSPTRG00000004935	LARP4	100	88.476	Pan_troglodytes
ENSFDAG00000006406	-	63	69.316	ENSPTRG00000045907	-	98	76.152	Pan_troglodytes
ENSFDAG00000006406	-	100	86.320	ENSPANG00000022964	LARP4	100	89.591	Papio_anubis
ENSFDAG00000006406	-	99	49.551	ENSPKIG00000005950	larp4ab	100	47.118	Paramormyrops_kingsleyae
ENSFDAG00000006406	-	99	69.093	ENSPSIG00000015867	LARP4	99	68.681	Pelodiscus_sinensis
ENSFDAG00000006406	-	51	55.348	ENSPMGG00000002719	larp4ab	98	55.882	Periophthalmus_magnuspinnatus
ENSFDAG00000006406	-	99	78.345	ENSPEMG00000018433	Larp4	94	83.766	Peromyscus_maniculatus_bairdii
ENSFDAG00000006406	-	100	73.842	ENSPCIG00000000384	LARP4	100	74.251	Phascolarctos_cinereus
ENSFDAG00000006406	-	99	49.361	ENSPFOG00000013148	larp4aa	99	47.594	Poecilia_formosa
ENSFDAG00000006406	-	99	44.118	ENSPFOG00000009764	larp4ab	99	43.867	Poecilia_formosa
ENSFDAG00000006406	-	99	49.488	ENSPLAG00000013626	larp4aa	95	49.617	Poecilia_latipinna
ENSFDAG00000006406	-	99	44.161	ENSPLAG00000008502	larp4ab	99	43.867	Poecilia_latipinna
ENSFDAG00000006406	-	99	48.662	ENSPMEG00000014271	larp4aa	95	49.045	Poecilia_mexicana
ENSFDAG00000006406	-	99	43.792	ENSPMEG00000002720	larp4ab	99	43.925	Poecilia_mexicana
ENSFDAG00000006406	-	99	49.552	ENSPREG00000022597	larp4aa	95	50.000	Poecilia_reticulata
ENSFDAG00000006406	-	51	58.886	ENSPREG00000016263	larp4ab	97	58.886	Poecilia_reticulata
ENSFDAG00000006406	-	71	87.209	ENSPPYG00000004512	-	100	87.209	Pongo_abelii
ENSFDAG00000006406	-	93	77.164	ENSPCAG00000003671	LARP4	99	77.164	Procavia_capensis
ENSFDAG00000006406	-	88	88.472	ENSPCOG00000026291	LARP4	98	89.963	Propithecus_coquereli
ENSFDAG00000006406	-	93	77.015	ENSPVAG00000016840	LARP4	91	76.866	Pteropus_vampyrus
ENSFDAG00000006406	-	53	61.954	ENSPNYG00000022265	larp4aa	95	48.454	Pundamilia_nyererei
ENSFDAG00000006406	-	96	48.707	ENSPNAG00000024770	larp4aa	94	49.252	Pygocentrus_nattereri
ENSFDAG00000006406	-	100	47.698	ENSPNAG00000014478	larp4ab	100	48.338	Pygocentrus_nattereri
ENSFDAG00000006406	-	90	88.390	ENSRBIG00000038857	-	100	88.390	Rhinopithecus_bieti
ENSFDAG00000006406	-	89	78.478	ENSRBIG00000036890	-	100	76.786	Rhinopithecus_bieti
ENSFDAG00000006406	-	100	77.624	ENSRROG00000025487	-	100	77.624	Rhinopithecus_roxellana
ENSFDAG00000006406	-	99	86.008	ENSRROG00000042764	-	99	89.569	Rhinopithecus_roxellana
ENSFDAG00000006406	-	100	84.138	ENSSBOG00000026650	LARP4	100	86.989	Saimiri_boliviensis_boliviensis
ENSFDAG00000006406	-	100	50.197	ENSSFOG00015003868	larp4aa	100	49.476	Scleropages_formosus
ENSFDAG00000006406	-	99	49.801	ENSSFOG00015014096	larp4ab	100	49.740	Scleropages_formosus
ENSFDAG00000006406	-	99	50.000	ENSSMAG00000019473	larp4aa	95	49.487	Scophthalmus_maximus
ENSFDAG00000006406	-	99	45.893	ENSSMAG00000002838	larp4ab	99	46.718	Scophthalmus_maximus
ENSFDAG00000006406	-	99	46.479	ENSSDUG00000006655	larp4ab	99	46.607	Seriola_dumerili
ENSFDAG00000006406	-	99	46.164	ENSSLDG00000001791	larp4ab	99	46.164	Seriola_lalandi_dorsalis
ENSFDAG00000006406	-	99	79.172	ENSSARG00000012469	LARP4	100	79.172	Sorex_araneus
ENSFDAG00000006406	-	95	66.335	ENSSPUG00000016552	LARP4	93	66.619	Sphenodon_punctatus
ENSFDAG00000006406	-	99	49.340	ENSSPAG00000007222	larp4aa	98	65.499	Stegastes_partitus
ENSFDAG00000006406	-	99	46.094	ENSSPAG00000002172	larp4ab	99	44.980	Stegastes_partitus
ENSFDAG00000006406	-	100	86.777	ENSSSCG00000028516	LARP4	100	86.777	Sus_scrofa
ENSFDAG00000006406	-	100	67.305	ENSTGUG00000003479	LARP4	100	67.715	Taeniopygia_guttata
ENSFDAG00000006406	-	70	53.626	ENSTRUG00000007206	larp4ab	99	45.479	Takifugu_rubripes
ENSFDAG00000006406	-	50	60.497	ENSTRUG00000015939	larp4aa	100	60.497	Takifugu_rubripes
ENSFDAG00000006406	-	99	45.087	ENSTNIG00000014571	larp4ab	99	44.804	Tetraodon_nigroviridis
ENSFDAG00000006406	-	99	48.748	ENSTNIG00000015109	larp4aa	50	61.818	Tetraodon_nigroviridis
ENSFDAG00000006406	-	99	75.276	ENSTBEG00000005167	LARP4	100	75.276	Tupaia_belangeri
ENSFDAG00000006406	-	100	84.384	ENSTTRG00000003764	LARP4	99	84.384	Tursiops_truncatus
ENSFDAG00000006406	-	72	87.452	ENSUAMG00000013764	LARP4	99	89.342	Ursus_americanus
ENSFDAG00000006406	-	100	86.878	ENSUMAG00000008473	LARP4	100	86.878	Ursus_maritimus
ENSFDAG00000006406	-	100	84.918	ENSVPAG00000010136	LARP4	100	84.918	Vicugna_pacos
ENSFDAG00000006406	-	100	86.740	ENSVVUG00000024717	LARP4	97	90.212	Vulpes_vulpes
ENSFDAG00000006406	-	93	59.249	ENSXETG00000007283	larp4	100	57.803	Xenopus_tropicalis
ENSFDAG00000006406	-	51	58.995	ENSXCOG00000019635	larp4ab	96	58.995	Xiphophorus_couchianus
ENSFDAG00000006406	-	99	44.855	ENSXMAG00000002156	larp4ab	99	44.327	Xiphophorus_maculatus
ENSFDAG00000006406	-	99	49.870	ENSXMAG00000010519	larp4aa	95	49.225	Xiphophorus_maculatus