EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000006445 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 2727 bases
Position: chrKN123095.1:5830951-5833677
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007185	DND1_DSRM	PF14709.7	3e-26	1	1
ENSFDAP00000007185	RRM_1	PF00076.22	4.9e-36	1	3
ENSFDAP00000007185	RRM_1	PF00076.22	4.9e-36	2	3
ENSFDAP00000007185	RRM_1	PF00076.22	4.9e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000020411	-	1518	-	ENSFDAP00000007185	505 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000006445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000006445	-	64	51.220	ENSFDAG00000017441	-	73	49.716
ENSFDAG00000006445	-	92	52.510	ENSFDAG00000019371	A1CF	87	52.703
ENSFDAG00000006445	-	59	54.667	ENSFDAG00000005861	SYNCRIP	53	54.000
ENSFDAG00000006445	-	61	55.769	ENSFDAG00000016898	-	54	51.695
ENSFDAG00000006445	-	96	86.653	ENSFDAG00000019281	-	94	84.722
ENSFDAG00000006445	-	62	66.987	ENSFDAG00000016326	RBM47	60	66.987

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006445	-	95	92.050	ENSG00000151962	RBM46	100	94.737	Homo_sapiens
ENSFDAG00000006445	-	90	64.454	ENSAPOG00000009209	rbm46	90	64.454	Acanthochromis_polyacanthus
ENSFDAG00000006445	-	97	86.796	ENSAMEG00000013290	RBM46	97	86.796	Ailuropoda_melanoleuca
ENSFDAG00000006445	-	90	59.870	ENSACIG00000014500	rbm46	88	60.087	Amphilophus_citrinellus
ENSFDAG00000006445	-	88	64.944	ENSAOCG00000001892	-	86	64.944	Amphiprion_ocellaris
ENSFDAG00000006445	-	88	64.944	ENSAPEG00000017762	rbm46	96	64.944	Amphiprion_percula
ENSFDAG00000006445	-	90	63.496	ENSATEG00000010775	rbm46	91	60.788	Anabas_testudineus
ENSFDAG00000006445	-	92	82.869	ENSAPLG00000005116	RBM46	100	82.869	Anas_platyrhynchos
ENSFDAG00000006445	-	99	82.143	ENSACAG00000015599	RBM46	94	82.143	Anolis_carolinensis
ENSFDAG00000006445	-	95	90.586	ENSANAG00000029193	RBM46	99	91.006	Aotus_nancymaae
ENSFDAG00000006445	-	90	63.067	ENSACLG00000016153	rbm46	81	62.716	Astatotilapia_calliptera
ENSFDAG00000006445	-	89	66.519	ENSAMXG00000009397	rbm46	98	66.519	Astyanax_mexicanus
ENSFDAG00000006445	-	88	62.821	ENSAMXG00000020892	-	87	62.821	Astyanax_mexicanus
ENSFDAG00000006445	-	95	91.423	ENSBTAG00000001696	RBM46	99	91.423	Bos_taurus
ENSFDAG00000006445	-	95	90.586	ENSCJAG00000001768	RBM46	99	91.006	Callithrix_jacchus
ENSFDAG00000006445	-	95	92.678	ENSCAFG00000008473	RBM46	99	92.678	Canis_familiaris
ENSFDAG00000006445	-	99	88.294	ENSCAFG00020002468	RBM46	95	92.735	Canis_lupus_dingo
ENSFDAG00000006445	-	95	91.423	ENSCHIG00000000502	RBM46	99	91.423	Capra_hircus
ENSFDAG00000006445	-	95	91.213	ENSTSYG00000010435	RBM46	99	91.649	Carlito_syrichta
ENSFDAG00000006445	-	73	90.296	ENSCAPG00000011841	-	99	90.296	Cavia_aperea
ENSFDAG00000006445	-	95	91.841	ENSCAPG00000011928	-	99	91.841	Cavia_aperea
ENSFDAG00000006445	-	96	82.081	ENSCPOG00000019272	-	96	82.081	Cavia_porcellus
ENSFDAG00000006445	-	95	91.841	ENSCPOG00000010284	-	99	92.077	Cavia_porcellus
ENSFDAG00000006445	-	95	89.495	ENSCPOG00000020396	-	99	89.157	Cavia_porcellus
ENSFDAG00000006445	-	94	76.632	ENSCCAG00000001323	-	99	76.632	Cebus_capucinus
ENSFDAG00000006445	-	95	92.050	ENSCCAG00000027619	-	99	92.077	Cebus_capucinus
ENSFDAG00000006445	-	95	91.841	ENSCATG00000040148	RBM46	99	91.863	Cercocebus_atys
ENSFDAG00000006445	-	97	88.824	ENSCLAG00000011886	-	98	88.824	Chinchilla_lanigera
ENSFDAG00000006445	-	95	91.632	ENSCLAG00000005846	-	99	91.649	Chinchilla_lanigera
ENSFDAG00000006445	-	97	86.214	ENSCSAG00000003263	RBM46	97	86.214	Chlorocebus_sabaeus
ENSFDAG00000006445	-	97	85.243	ENSCHOG00000003429	RBM46	97	85.631	Choloepus_hoffmanni
ENSFDAG00000006445	-	88	88.539	ENSCPBG00000009314	RBM46	97	88.539	Chrysemys_picta_bellii
ENSFDAG00000006445	-	95	91.423	ENSCANG00000039065	RBM46	99	91.649	Colobus_angolensis_palliatus
ENSFDAG00000006445	-	95	92.050	ENSCGRG00001016714	Rbm46	99	92.291	Cricetulus_griseus_chok1gshd
ENSFDAG00000006445	-	95	92.050	ENSCGRG00000011738	Rbm46	99	92.291	Cricetulus_griseus_crigri
ENSFDAG00000006445	-	89	57.837	ENSCSEG00000005530	rbm46	96	57.837	Cynoglossus_semilaevis
ENSFDAG00000006445	-	93	61.064	ENSCVAG00000021013	rbm46	96	61.064	Cyprinodon_variegatus
ENSFDAG00000006445	-	93	64.211	ENSDARG00000079452	rbm46	91	64.211	Danio_rerio
ENSFDAG00000006445	-	97	86.408	ENSDNOG00000016195	RBM46	97	86.408	Dasypus_novemcinctus
ENSFDAG00000006445	-	95	92.259	ENSDORG00000006405	Rbm46	99	92.505	Dipodomys_ordii
ENSFDAG00000006445	-	97	84.660	ENSETEG00000014902	RBM46	97	84.660	Echinops_telfairi
ENSFDAG00000006445	-	99	86.706	ENSEASG00005015821	RBM46	94	86.706	Equus_asinus_asinus
ENSFDAG00000006445	-	95	91.004	ENSECAG00000007649	RBM46	99	91.004	Equus_caballus
ENSFDAG00000006445	-	97	83.301	ENSEEUG00000011824	RBM46	97	83.301	Erinaceus_europaeus
ENSFDAG00000006445	-	75	68.229	ENSELUG00000008166	rbm46	98	66.497	Esox_lucius
ENSFDAG00000006445	-	99	88.294	ENSFCAG00000029812	RBM46	99	92.505	Felis_catus
ENSFDAG00000006445	-	94	80.252	ENSFALG00000013157	RBM46	94	80.252	Ficedula_albicollis
ENSFDAG00000006445	-	78	60.914	ENSFHEG00000013257	rbm46	87	60.914	Fundulus_heteroclitus
ENSFDAG00000006445	-	93	76.221	ENSGALG00000009278	RBM46	99	76.221	Gallus_gallus
ENSFDAG00000006445	-	57	77.700	ENSGAFG00000020245	rbm46	67	77.700	Gambusia_affinis
ENSFDAG00000006445	-	93	88.889	ENSGAGG00000002019	RBM46	89	88.889	Gopherus_agassizii
ENSFDAG00000006445	-	95	92.259	ENSGGOG00000001876	RBM46	99	92.291	Gorilla_gorilla
ENSFDAG00000006445	-	88	60.090	ENSHBUG00000009609	rbm46	91	65.238	Haplochromis_burtoni
ENSFDAG00000006445	-	86	89.838	ENSHGLG00000002463	-	99	89.838	Heterocephalus_glaber_female
ENSFDAG00000006445	-	97	75.600	ENSHGLG00000010742	-	98	75.200	Heterocephalus_glaber_female
ENSFDAG00000006445	-	96	74.134	ENSHGLG00000002940	-	93	74.134	Heterocephalus_glaber_female
ENSFDAG00000006445	-	95	89.540	ENSHGLG00100012752	-	99	89.722	Heterocephalus_glaber_male
ENSFDAG00000006445	-	97	75.600	ENSHGLG00100004977	-	98	75.200	Heterocephalus_glaber_male
ENSFDAG00000006445	-	96	70.935	ENSHGLG00100018987	-	93	70.935	Heterocephalus_glaber_male
ENSFDAG00000006445	-	89	51.339	ENSHCOG00000012998	rbm46	88	51.810	Hippocampus_comes
ENSFDAG00000006445	-	91	64.718	ENSIPUG00000024038	rbm46	96	64.375	Ictalurus_punctatus
ENSFDAG00000006445	-	95	92.887	ENSSTOG00000007918	RBM46	99	92.934	Ictidomys_tridecemlineatus
ENSFDAG00000006445	-	95	90.605	ENSJJAG00000003902	Rbm46	99	90.792	Jaculus_jaculus
ENSFDAG00000006445	-	92	63.002	ENSKMAG00000015127	rbm46	88	62.162	Kryptolebias_marmoratus
ENSFDAG00000006445	-	99	79.802	ENSLACG00000002062	RBM46	94	79.802	Latimeria_chalumnae
ENSFDAG00000006445	-	91	73.810	ENSLOCG00000008298	rbm46	99	73.810	Lepisosteus_oculatus
ENSFDAG00000006445	-	92	92.719	ENSLAFG00000015448	RBM46	99	92.719	Loxodonta_africana
ENSFDAG00000006445	-	95	92.259	ENSMFAG00000043485	RBM46	99	92.291	Macaca_fascicularis
ENSFDAG00000006445	-	95	92.259	ENSMMUG00000021147	RBM46	99	92.259	Macaca_mulatta
ENSFDAG00000006445	-	95	92.259	ENSMNEG00000002787	RBM46	99	92.291	Macaca_nemestrina
ENSFDAG00000006445	-	95	91.632	ENSMLEG00000029756	RBM46	99	91.649	Mandrillus_leucophaeus
ENSFDAG00000006445	-	88	65.772	ENSMAMG00000009093	rbm46	98	61.078	Mastacembelus_armatus
ENSFDAG00000006445	-	91	62.473	ENSMZEG00005027849	rbm46	94	62.313	Maylandia_zebra
ENSFDAG00000006445	-	93	76.972	ENSMGAG00000001457	RBM46	99	76.972	Meleagris_gallopavo
ENSFDAG00000006445	-	95	92.050	ENSMAUG00000009911	Rbm46	99	92.291	Mesocricetus_auratus
ENSFDAG00000006445	-	95	92.050	ENSMICG00000042747	RBM46	99	92.077	Microcebus_murinus
ENSFDAG00000006445	-	95	92.259	ENSMOCG00000001188	Rbm46	99	92.505	Microtus_ochrogaster
ENSFDAG00000006445	-	90	62.227	ENSMMOG00000011214	rbm46	86	62.227	Mola_mola
ENSFDAG00000006445	-	93	91.489	ENSMODG00000001302	RBM46	81	91.489	Monodelphis_domestica
ENSFDAG00000006445	-	87	60.000	ENSMALG00000006185	rbm46	93	60.000	Monopterus_albus
ENSFDAG00000006445	-	95	92.259	MGP_CAROLIEiJ_G0025101	Rbm46	99	92.505	Mus_caroli
ENSFDAG00000006445	-	95	91.841	ENSMUSG00000033882	Rbm46	99	92.077	Mus_musculus
ENSFDAG00000006445	-	95	91.841	MGP_PahariEiJ_G0026544	Rbm46	99	92.077	Mus_pahari
ENSFDAG00000006445	-	95	91.632	MGP_SPRETEiJ_G0026043	Rbm46	99	91.863	Mus_spretus
ENSFDAG00000006445	-	95	92.887	ENSMPUG00000005670	RBM46	99	92.887	Mustela_putorius_furo
ENSFDAG00000006445	-	97	85.853	ENSMLUG00000003221	RBM46	97	85.853	Myotis_lucifugus
ENSFDAG00000006445	-	95	91.213	ENSNGAG00000004231	Rbm46	99	91.435	Nannospalax_galili
ENSFDAG00000006445	-	88	63.453	ENSNBRG00000000273	rbm46	84	63.453	Neolamprologus_brichardi
ENSFDAG00000006445	-	95	92.050	ENSNLEG00000006184	RBM46	99	92.077	Nomascus_leucogenys
ENSFDAG00000006445	-	82	91.827	ENSMEUG00000013328	RBM46	99	91.707	Notamacropus_eugenii
ENSFDAG00000006445	-	56	92.226	ENSOPRG00000007136	RBM46	100	93.286	Ochotona_princeps
ENSFDAG00000006445	-	95	90.188	ENSODEG00000000735	-	99	90.188	Octodon_degus
ENSFDAG00000006445	-	97	89.357	ENSODEG00000018002	-	97	89.357	Octodon_degus
ENSFDAG00000006445	-	88	64.444	ENSONIG00000014096	rbm46	96	64.444	Oreochromis_niloticus
ENSFDAG00000006445	-	95	83.128	ENSOANG00000002141	RBM46	97	84.355	Ornithorhynchus_anatinus
ENSFDAG00000006445	-	97	86.796	ENSOCUG00000017859	RBM46	97	86.796	Oryctolagus_cuniculus
ENSFDAG00000006445	-	92	60.000	ENSORLG00000002429	rbm46	90	61.233	Oryzias_latipes
ENSFDAG00000006445	-	92	60.338	ENSORLG00020022154	rbm46	85	60.465	Oryzias_latipes_hni
ENSFDAG00000006445	-	92	60.377	ENSORLG00015020234	rbm46	94	60.504	Oryzias_latipes_hsok
ENSFDAG00000006445	-	88	60.659	ENSOMEG00000022580	rbm46	86	59.657	Oryzias_melastigma
ENSFDAG00000006445	-	97	86.796	ENSOGAG00000005647	RBM46	97	86.796	Otolemur_garnettii
ENSFDAG00000006445	-	95	91.632	ENSOARG00000016406	RBM46	99	91.632	Ovis_aries
ENSFDAG00000006445	-	95	92.259	ENSPPAG00000043236	RBM46	99	92.291	Pan_paniscus
ENSFDAG00000006445	-	95	92.067	ENSPPRG00000009416	RBM46	99	92.291	Panthera_pardus
ENSFDAG00000006445	-	95	92.067	ENSPTIG00000017449	RBM46	99	92.291	Panthera_tigris_altaica
ENSFDAG00000006445	-	95	92.259	ENSPTRG00000016538	RBM46	99	92.291	Pan_troglodytes
ENSFDAG00000006445	-	95	92.259	ENSPANG00000004186	RBM46	99	92.291	Papio_anubis
ENSFDAG00000006445	-	90	69.316	ENSPKIG00000015334	rbm46	79	69.316	Paramormyrops_kingsleyae
ENSFDAG00000006445	-	96	87.037	ENSPSIG00000006429	RBM46	99	87.037	Pelodiscus_sinensis
ENSFDAG00000006445	-	88	79.026	ENSPMGG00000019872	rbm46	92	79.026	Periophthalmus_magnuspinnatus
ENSFDAG00000006445	-	95	92.050	ENSPEMG00000013899	Rbm46	99	92.291	Peromyscus_maniculatus_bairdii
ENSFDAG00000006445	-	95	91.841	ENSPCIG00000029626	RBM46	99	91.841	Phascolarctos_cinereus
ENSFDAG00000006445	-	79	76.271	ENSPFOG00000001079	rbm46	75	76.271	Poecilia_formosa
ENSFDAG00000006445	-	92	61.392	ENSPLAG00000004541	rbm46	83	61.392	Poecilia_latipinna
ENSFDAG00000006445	-	92	61.392	ENSPMEG00000015724	rbm46	94	61.834	Poecilia_mexicana
ENSFDAG00000006445	-	90	63.596	ENSPREG00000014464	rbm46	95	63.596	Poecilia_reticulata
ENSFDAG00000006445	-	99	87.698	ENSPPYG00000015144	RBM46	94	87.698	Pongo_abelii
ENSFDAG00000006445	-	96	84.189	ENSPCAG00000003110	RBM46	91	85.010	Procavia_capensis
ENSFDAG00000006445	-	95	91.632	ENSPCOG00000024347	RBM46	99	91.649	Propithecus_coquereli
ENSFDAG00000006445	-	99	88.095	ENSPVAG00000008376	RBM46	94	88.095	Pteropus_vampyrus
ENSFDAG00000006445	-	89	67.026	ENSPNAG00000025312	rbm46	88	66.738	Pygocentrus_nattereri
ENSFDAG00000006445	-	97	86.602	ENSRNOG00000025823	Rbm46	97	86.602	Rattus_norvegicus
ENSFDAG00000006445	-	95	90.795	ENSRBIG00000032583	RBM46	99	91.006	Rhinopithecus_bieti
ENSFDAG00000006445	-	95	91.004	ENSRROG00000044288	RBM46	99	91.221	Rhinopithecus_roxellana
ENSFDAG00000006445	-	95	91.841	ENSSBOG00000033028	RBM46	99	91.863	Saimiri_boliviensis_boliviensis
ENSFDAG00000006445	-	97	85.825	ENSSHAG00000012596	RBM46	97	85.825	Sarcophilus_harrisii
ENSFDAG00000006445	-	89	71.715	ENSSFOG00015000087	rbm46	86	70.732	Scleropages_formosus
ENSFDAG00000006445	-	89	61.863	ENSSMAG00000017042	rbm46	94	61.863	Scophthalmus_maximus
ENSFDAG00000006445	-	90	64.551	ENSSDUG00000020645	rbm46	86	65.410	Seriola_dumerili
ENSFDAG00000006445	-	97	87.184	ENSSARG00000006520	RBM46	97	87.184	Sorex_araneus
ENSFDAG00000006445	-	95	85.565	ENSSPUG00000004773	-	99	85.565	Sphenodon_punctatus
ENSFDAG00000006445	-	99	83.235	ENSSPUG00000012525	-	94	83.235	Sphenodon_punctatus
ENSFDAG00000006445	-	91	61.522	ENSSPAG00000013697	rbm46	96	61.522	Stegastes_partitus
ENSFDAG00000006445	-	95	92.484	ENSSSCG00000008994	RBM46	99	92.484	Sus_scrofa
ENSFDAG00000006445	-	92	80.086	ENSTGUG00000005307	RBM46	100	80.086	Taeniopygia_guttata
ENSFDAG00000006445	-	91	62.527	ENSTRUG00000004237	rbm46	92	62.527	Takifugu_rubripes
ENSFDAG00000006445	-	90	60.907	ENSTNIG00000008714	rbm46	85	60.907	Tetraodon_nigroviridis
ENSFDAG00000006445	-	96	87.269	ENSTBEG00000013949	RBM46	91	87.269	Tupaia_belangeri
ENSFDAG00000006445	-	97	84.854	ENSTTRG00000001239	RBM46	97	84.854	Tursiops_truncatus
ENSFDAG00000006445	-	95	92.887	ENSUAMG00000026593	RBM46	99	92.887	Ursus_americanus
ENSFDAG00000006445	-	95	92.678	ENSUMAG00000016442	RBM46	99	92.678	Ursus_maritimus
ENSFDAG00000006445	-	95	92.887	ENSVVUG00000024957	RBM46	99	92.934	Vulpes_vulpes
ENSFDAG00000006445	-	73	68.564	ENSXETG00000032067	-	100	68.022	Xenopus_tropicalis
ENSFDAG00000006445	-	93	74.573	ENSXETG00000022412	-	87	74.573	Xenopus_tropicalis
ENSFDAG00000006445	-	93	54.545	ENSXETG00000032344	-	88	54.545	Xenopus_tropicalis
ENSFDAG00000006445	-	88	63.181	ENSXMAG00000008237	rbm46	89	63.181	Xiphophorus_maculatus