EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000006451 (Gene tree)
Gene ID: 104868584
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 70434 bases
Position: chrKN122604.1:336822-407255
Accession: 104868584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007172	PRP1_N	PF06424.12	2e-48	1	1
ENSFDAP00000007179	PRP1_N	PF06424.12	7.2e-48	1	1
ENSFDAP00000007183	PRP1_N	PF06424.12	5.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000029520	PRPF6-203	2862	-	ENSFDAP00000007172	953 (aa)	-	-
ENSFDAT00000020397	PRPF6-201	7126	-	ENSFDAP00000007183	882 (aa)	-	-
ENSFDAT00000020413	PRPF6-202	2802	XM_010633424	ENSFDAP00000007179	933 (aa)	XP_010631726	-

Gene Model

Click here to download ENSFDAG00000006451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006451	PRPF6	100	97.959	ENSG00000101161	PRPF6	100	96.599	Homo_sapiens
ENSFDAG00000006451	PRPF6	100	92.857	ENSAPOG00000010395	prpf6	96	92.136	Acanthochromis_polyacanthus
ENSFDAG00000006451	PRPF6	100	98.639	ENSAMEG00000001916	PRPF6	99	97.346	Ailuropoda_melanoleuca
ENSFDAG00000006451	PRPF6	100	91.392	ENSACIG00000019862	prpf6	96	91.817	Amphilophus_citrinellus
ENSFDAG00000006451	PRPF6	100	92.744	ENSAOCG00000012988	prpf6	96	92.030	Amphiprion_ocellaris
ENSFDAG00000006451	PRPF6	100	85.828	ENSAPEG00000008301	prpf6	100	85.547	Amphiprion_percula
ENSFDAG00000006451	PRPF6	100	91.073	ENSATEG00000005581	prpf6	96	91.498	Anabas_testudineus
ENSFDAG00000006451	PRPF6	100	98.073	ENSACAG00000006464	PRPF6	95	96.706	Anolis_carolinensis
ENSFDAG00000006451	PRPF6	100	98.073	ENSANAG00000012661	PRPF6	100	97.173	Aotus_nancymaae
ENSFDAG00000006451	PRPF6	100	92.404	ENSACLG00000025875	prpf6	96	91.711	Astatotilapia_calliptera
ENSFDAG00000006451	PRPF6	100	92.630	ENSAMXG00000001929	prpf6	96	92.021	Astyanax_mexicanus
ENSFDAG00000006451	PRPF6	100	98.299	ENSBTAG00000011656	PRPF6	100	96.918	Bos_taurus
ENSFDAG00000006451	PRPF6	100	98.073	ENSCJAG00000010616	PRPF6	100	96.706	Callithrix_jacchus
ENSFDAG00000006451	PRPF6	100	98.526	ENSCAFG00000013165	PRPF6	100	97.131	Canis_familiaris
ENSFDAG00000006451	PRPF6	100	98.526	ENSCAFG00020002050	PRPF6	100	97.131	Canis_lupus_dingo
ENSFDAG00000006451	PRPF6	100	98.299	ENSCHIG00000018187	PRPF6	100	96.918	Capra_hircus
ENSFDAG00000006451	PRPF6	100	98.753	ENSTSYG00000007814	PRPF6	100	97.343	Carlito_syrichta
ENSFDAG00000006451	PRPF6	100	98.639	ENSCAPG00000015077	PRPF6	100	98.691	Cavia_aperea
ENSFDAG00000006451	PRPF6	100	100.000	ENSCPOG00000007518	PRPF6	100	98.512	Cavia_porcellus
ENSFDAG00000006451	PRPF6	100	94.671	ENSCCAG00000024564	PRPF6	100	93.518	Cebus_capucinus
ENSFDAG00000006451	PRPF6	100	97.846	ENSCATG00000037473	PRPF6	100	96.493	Cercocebus_atys
ENSFDAG00000006451	PRPF6	100	95.692	ENSCLAG00000003854	PRPF6	100	94.474	Chinchilla_lanigera
ENSFDAG00000006451	PRPF6	100	92.455	ENSCSAG00000016742	PRPF6	100	91.447	Chlorocebus_sabaeus
ENSFDAG00000006451	PRPF6	90	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSFDAG00000006451	PRPF6	100	98.299	ENSCPBG00000013964	PRPF6	96	96.918	Chrysemys_picta_bellii
ENSFDAG00000006451	PRPF6	100	72.778	ENSCING00000008817	-	99	72.410	Ciona_intestinalis
ENSFDAG00000006451	PRPF6	100	97.846	ENSCANG00000038230	PRPF6	100	96.493	Colobus_angolensis_palliatus
ENSFDAG00000006451	PRPF6	100	99.546	ENSCGRG00001022666	Prpf6	100	98.087	Cricetulus_griseus_chok1gshd
ENSFDAG00000006451	PRPF6	100	86.621	ENSCSEG00000018561	prpf6	100	86.291	Cynoglossus_semilaevis
ENSFDAG00000006451	PRPF6	100	92.744	ENSCVAG00000010550	prpf6	96	92.030	Cyprinodon_variegatus
ENSFDAG00000006451	PRPF6	100	91.180	ENSDARG00000091367	prpf6	99	91.605	Danio_rerio
ENSFDAG00000006451	PRPF6	100	97.619	ENSDNOG00000040544	PRPF6	100	96.281	Dasypus_novemcinctus
ENSFDAG00000006451	PRPF6	97	98.598	ENSDORG00000005406	Prpf6	100	98.598	Dipodomys_ordii
ENSFDAG00000006451	PRPF6	98	72.822	FBgn0036828	CG6841	98	71.245	Drosophila_melanogaster
ENSFDAG00000006451	PRPF6	84	100.000	ENSETEG00000004447	PRPF6	81	100.000	Echinops_telfairi
ENSFDAG00000006451	PRPF6	100	86.554	ENSEBUG00000008835	prpf6	99	85.684	Eptatretus_burgeri
ENSFDAG00000006451	PRPF6	100	98.526	ENSEASG00005023115	PRPF6	100	97.131	Equus_asinus_asinus
ENSFDAG00000006451	PRPF6	100	93.991	ENSECAG00000013983	PRPF6	100	92.880	Equus_caballus
ENSFDAG00000006451	PRPF6	93	95.843	ENSEEUG00000000180	PRPF6	79	95.843	Erinaceus_europaeus
ENSFDAG00000006451	PRPF6	100	91.497	ENSELUG00000001945	prpf6	93	90.223	Esox_lucius
ENSFDAG00000006451	PRPF6	100	98.526	ENSFCAG00000001183	PRPF6	100	97.131	Felis_catus
ENSFDAG00000006451	PRPF6	99	91.581	ENSFALG00000006046	-	97	89.457	Ficedula_albicollis
ENSFDAG00000006451	PRPF6	100	98.186	ENSFALG00000010326	-	97	96.812	Ficedula_albicollis
ENSFDAG00000006451	PRPF6	100	93.424	ENSFHEG00000000560	prpf6	96	92.242	Fundulus_heteroclitus
ENSFDAG00000006451	PRPF6	100	88.952	ENSGMOG00000015622	prpf6	99	88.055	Gadus_morhua
ENSFDAG00000006451	PRPF6	100	97.959	ENSGALG00000006001	PRPF6	100	96.599	Gallus_gallus
ENSFDAG00000006451	PRPF6	100	87.982	ENSGAFG00000021109	prpf6	96	87.566	Gambusia_affinis
ENSFDAG00000006451	PRPF6	100	91.156	ENSGACG00000002576	prpf6	99	90.117	Gasterosteus_aculeatus
ENSFDAG00000006451	PRPF6	100	98.186	ENSGAGG00000008653	PRPF6	96	96.812	Gopherus_agassizii
ENSFDAG00000006451	PRPF6	100	97.959	ENSGGOG00000016876	PRPF6	100	96.599	Gorilla_gorilla
ENSFDAG00000006451	PRPF6	100	92.404	ENSHBUG00000004496	prpf6	96	91.711	Haplochromis_burtoni
ENSFDAG00000006451	PRPF6	100	99.773	ENSHGLG00000009222	PRPF6	100	98.300	Heterocephalus_glaber_female
ENSFDAG00000006451	PRPF6	100	99.773	ENSHGLG00100016600	PRPF6	100	99.782	Heterocephalus_glaber_male
ENSFDAG00000006451	PRPF6	100	91.156	ENSHCOG00000011513	prpf6	96	90.542	Hippocampus_comes
ENSFDAG00000006451	PRPF6	100	92.136	ENSIPUG00000004912	prpf6	96	92.136	Ictalurus_punctatus
ENSFDAG00000006451	PRPF6	100	96.829	ENSSTOG00000002922	PRPF6	100	95.541	Ictidomys_tridecemlineatus
ENSFDAG00000006451	PRPF6	100	99.773	ENSJJAG00000000836	Prpf6	100	98.300	Jaculus_jaculus
ENSFDAG00000006451	PRPF6	100	91.073	ENSKMAG00000017800	prpf6	96	91.498	Kryptolebias_marmoratus
ENSFDAG00000006451	PRPF6	100	91.837	ENSLBEG00000012582	prpf6	96	90.755	Labrus_bergylta
ENSFDAG00000006451	PRPF6	100	94.558	ENSLOCG00000004827	prpf6	96	92.455	Lepisosteus_oculatus
ENSFDAG00000006451	PRPF6	100	97.732	ENSLAFG00000005272	PRPF6	100	96.387	Loxodonta_africana
ENSFDAG00000006451	PRPF6	100	97.846	ENSMFAG00000037542	PRPF6	100	96.493	Macaca_fascicularis
ENSFDAG00000006451	PRPF6	97	99.653	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSFDAG00000006451	PRPF6	100	82.599	ENSMNEG00000045555	PRPF6	100	82.203	Macaca_nemestrina
ENSFDAG00000006451	PRPF6	100	92.517	ENSMAMG00000010718	prpf6	96	91.817	Mastacembelus_armatus
ENSFDAG00000006451	PRPF6	100	91.846	ENSMZEG00005015261	-	99	91.189	Maylandia_zebra
ENSFDAG00000006451	PRPF6	100	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSFDAG00000006451	PRPF6	100	98.186	ENSMGAG00000006634	PRPF6	100	98.255	Meleagris_gallopavo
ENSFDAG00000006451	PRPF6	100	99.660	ENSMAUG00000013969	Prpf6	100	98.193	Mesocricetus_auratus
ENSFDAG00000006451	PRPF6	93	98.297	ENSMICG00000017793	PRPF6	99	98.297	Microcebus_murinus
ENSFDAG00000006451	PRPF6	100	99.546	ENSMOCG00000001701	Prpf6	100	98.087	Microtus_ochrogaster
ENSFDAG00000006451	PRPF6	100	90.542	ENSMMOG00000020419	prpf6	100	90.967	Mola_mola
ENSFDAG00000006451	PRPF6	99	98.936	ENSMODG00000017051	PRPF6	99	97.287	Monodelphis_domestica
ENSFDAG00000006451	PRPF6	100	92.630	ENSMALG00000000089	prpf6	98	92.912	Monopterus_albus
ENSFDAG00000006451	PRPF6	100	92.517	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSFDAG00000006451	PRPF6	100	99.660	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSFDAG00000006451	PRPF6	100	99.660	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSFDAG00000006451	PRPF6	100	99.660	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSFDAG00000006451	PRPF6	97	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSFDAG00000006451	PRPF6	100	99.887	ENSNGAG00000003365	Prpf6	100	98.406	Nannospalax_galili
ENSFDAG00000006451	PRPF6	100	92.517	ENSNBRG00000015025	prpf6	96	91.817	Neolamprologus_brichardi
ENSFDAG00000006451	PRPF6	100	97.846	ENSNLEG00000010208	PRPF6	100	96.493	Nomascus_leucogenys
ENSFDAG00000006451	PRPF6	100	89.130	ENSMEUG00000009824	-	90	89.130	Notamacropus_eugenii
ENSFDAG00000006451	PRPF6	100	93.311	ENSODEG00000004841	PRPF6	100	92.242	Octodon_degus
ENSFDAG00000006451	PRPF6	100	92.404	ENSONIG00000017406	prpf6	96	91.711	Oreochromis_niloticus
ENSFDAG00000006451	PRPF6	100	98.526	ENSOANG00000004920	PRPF6	100	97.131	Ornithorhynchus_anatinus
ENSFDAG00000006451	PRPF6	100	97.619	ENSOCUG00000014151	PRPF6	98	97.710	Oryctolagus_cuniculus
ENSFDAG00000006451	PRPF6	100	92.177	ENSORLG00000009592	prpf6	96	91.180	Oryzias_latipes
ENSFDAG00000006451	PRPF6	100	92.290	ENSORLG00020001458	prpf6	96	91.286	Oryzias_latipes_hni
ENSFDAG00000006451	PRPF6	100	92.290	ENSORLG00015018762	prpf6	96	91.286	Oryzias_latipes_hsok
ENSFDAG00000006451	PRPF6	100	92.177	ENSOMEG00000012174	prpf6	96	91.605	Oryzias_melastigma
ENSFDAG00000006451	PRPF6	100	90.713	ENSOGAG00000007573	PRPF6	100	89.809	Otolemur_garnettii
ENSFDAG00000006451	PRPF6	100	98.299	ENSOARG00000008776	PRPF6	99	97.332	Ovis_aries
ENSFDAG00000006451	PRPF6	100	97.959	ENSPPAG00000008686	PRPF6	100	96.599	Pan_paniscus
ENSFDAG00000006451	PRPF6	100	98.413	ENSPPRG00000008497	PRPF6	100	97.024	Panthera_pardus
ENSFDAG00000006451	PRPF6	100	98.413	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSFDAG00000006451	PRPF6	100	97.959	ENSPTRG00000013765	PRPF6	100	96.599	Pan_troglodytes
ENSFDAG00000006451	PRPF6	100	97.279	ENSPANG00000024135	PRPF6	100	95.962	Papio_anubis
ENSFDAG00000006451	PRPF6	100	94.104	ENSPKIG00000005627	prpf6	99	93.411	Paramormyrops_kingsleyae
ENSFDAG00000006451	PRPF6	100	98.526	ENSPSIG00000007717	PRPF6	100	98.526	Pelodiscus_sinensis
ENSFDAG00000006451	PRPF6	100	89.160	ENSPMGG00000008925	prpf6	96	89.373	Periophthalmus_magnuspinnatus
ENSFDAG00000006451	PRPF6	100	99.546	ENSPEMG00000016036	Prpf6	100	98.087	Peromyscus_maniculatus_bairdii
ENSFDAG00000006451	PRPF6	100	87.783	ENSPMAG00000006144	prpf6	99	86.915	Petromyzon_marinus
ENSFDAG00000006451	PRPF6	100	98.639	ENSPCIG00000017909	PRPF6	100	97.237	Phascolarctos_cinereus
ENSFDAG00000006451	PRPF6	100	92.971	ENSPFOG00000006431	prpf6	96	92.242	Poecilia_formosa
ENSFDAG00000006451	PRPF6	100	92.857	ENSPLAG00000005974	prpf6	96	92.136	Poecilia_latipinna
ENSFDAG00000006451	PRPF6	100	93.084	ENSPMEG00000009977	prpf6	96	92.349	Poecilia_mexicana
ENSFDAG00000006451	PRPF6	100	92.971	ENSPREG00000017993	prpf6	92	92.349	Poecilia_reticulata
ENSFDAG00000006451	PRPF6	100	97.392	ENSPPYG00000011256	PRPF6	100	96.068	Pongo_abelii
ENSFDAG00000006451	PRPF6	97	99.653	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSFDAG00000006451	PRPF6	100	98.186	ENSPCOG00000016881	PRPF6	100	96.812	Propithecus_coquereli
ENSFDAG00000006451	PRPF6	100	91.950	ENSPVAG00000014316	PRPF6	100	90.967	Pteropus_vampyrus
ENSFDAG00000006451	PRPF6	100	74.858	ENSPNYG00000001939	prpf6	70	90.048	Pundamilia_nyererei
ENSFDAG00000006451	PRPF6	100	91.923	ENSPNAG00000015606	prpf6	96	92.349	Pygocentrus_nattereri
ENSFDAG00000006451	PRPF6	100	99.546	ENSRNOG00000051498	Prpf6	100	98.087	Rattus_norvegicus
ENSFDAG00000006451	PRPF6	100	97.846	ENSRBIG00000043613	PRPF6	100	96.493	Rhinopithecus_bieti
ENSFDAG00000006451	PRPF6	97	98.270	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSFDAG00000006451	PRPF6	97	93.772	ENSSBOG00000020632	PRPF6	93	93.772	Saimiri_boliviensis_boliviensis
ENSFDAG00000006451	PRPF6	100	98.639	ENSSHAG00000016810	PRPF6	100	97.237	Sarcophilus_harrisii
ENSFDAG00000006451	PRPF6	100	94.331	ENSSFOG00015020859	prpf6	99	94.880	Scleropages_formosus
ENSFDAG00000006451	PRPF6	100	91.723	ENSSMAG00000008112	prpf6	96	90.648	Scophthalmus_maximus
ENSFDAG00000006451	PRPF6	100	92.404	ENSSDUG00000016142	prpf6	96	91.711	Seriola_dumerili
ENSFDAG00000006451	PRPF6	100	92.404	ENSSLDG00000025283	prpf6	100	88.310	Seriola_lalandi_dorsalis
ENSFDAG00000006451	PRPF6	100	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSFDAG00000006451	PRPF6	100	92.404	ENSSPAG00000015850	prpf6	96	91.711	Stegastes_partitus
ENSFDAG00000006451	PRPF6	100	98.413	ENSSSCG00000029119	PRPF6	100	98.413	Sus_scrofa
ENSFDAG00000006451	PRPF6	100	98.299	ENSTGUG00000007221	PRPF6	99	96.918	Taeniopygia_guttata
ENSFDAG00000006451	PRPF6	100	90.223	ENSTRUG00000002920	prpf6	96	90.648	Takifugu_rubripes
ENSFDAG00000006451	PRPF6	100	84.038	ENSTNIG00000017873	prpf6	100	84.461	Tetraodon_nigroviridis
ENSFDAG00000006451	PRPF6	90	98.630	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSFDAG00000006451	PRPF6	100	97.846	ENSTTRG00000013068	PRPF6	100	96.493	Tursiops_truncatus
ENSFDAG00000006451	PRPF6	100	97.166	ENSUMAG00000021631	PRPF6	99	96.757	Ursus_maritimus
ENSFDAG00000006451	PRPF6	100	98.526	ENSVVUG00000014948	PRPF6	100	97.131	Vulpes_vulpes
ENSFDAG00000006451	PRPF6	100	95.351	ENSXETG00000012054	prpf6	97	94.798	Xenopus_tropicalis
ENSFDAG00000006451	PRPF6	100	93.084	ENSXCOG00000008082	prpf6	96	92.349	Xiphophorus_couchianus
ENSFDAG00000006451	PRPF6	100	93.084	ENSXMAG00000015581	prpf6	96	92.349	Xiphophorus_maculatus