EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000006538 (Gene tree)
Gene ID: 104848618
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 56524 bases
Position: chrKN123769.1:542013-598536
Accession: 104848618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009052	Rif1_N	PF12231.8	5.7e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022075	RIF1-201	8778	XM_010604661	ENSFDAP00000009052	2455 (aa)	XP_010602963	UPI00053F9C6F

Gene Model

Click here to download ENSFDAG00000006538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006538	RIF1	99	76.039	ENSG00000080345	RIF1	97	88.078	Homo_sapiens
ENSFDAG00000006538	RIF1	99	75.202	ENSAMEG00000008461	RIF1	100	75.202	Ailuropoda_melanoleuca
ENSFDAG00000006538	RIF1	68	50.427	ENSACIG00000017765	rif1	73	50.353	Amphilophus_citrinellus
ENSFDAG00000006538	RIF1	65	48.875	ENSAOCG00000017231	rif1	66	48.706	Amphiprion_ocellaris
ENSFDAG00000006538	RIF1	63	54.424	ENSAPEG00000013228	rif1	64	54.254	Amphiprion_percula
ENSFDAG00000006538	RIF1	64	47.953	ENSATEG00000022887	rif1	66	47.850	Anabas_testudineus
ENSFDAG00000006538	RIF1	87	61.183	ENSAPLG00000007092	RIF1	95	61.183	Anas_platyrhynchos
ENSFDAG00000006538	RIF1	84	58.982	ENSACAG00000003714	RIF1	90	58.982	Anolis_carolinensis
ENSFDAG00000006538	RIF1	99	75.020	ENSANAG00000024840	RIF1	99	75.020	Aotus_nancymaae
ENSFDAG00000006538	RIF1	78	51.675	ENSAMXG00000010910	rif1	66	51.675	Astyanax_mexicanus
ENSFDAG00000006538	RIF1	93	73.044	ENSBTAG00000021020	RIF1	99	73.216	Bos_taurus
ENSFDAG00000006538	RIF1	99	74.324	ENSCJAG00000003138	RIF1	99	74.390	Callithrix_jacchus
ENSFDAG00000006538	RIF1	99	73.761	ENSCAFG00000005670	RIF1	97	73.903	Canis_familiaris
ENSFDAG00000006538	RIF1	99	73.393	ENSCAFG00020016401	RIF1	99	73.535	Canis_lupus_dingo
ENSFDAG00000006538	RIF1	99	73.185	ENSCHIG00000020327	RIF1	99	73.244	Capra_hircus
ENSFDAG00000006538	RIF1	99	70.979	ENSTSYG00000008861	RIF1	100	71.020	Carlito_syrichta
ENSFDAG00000006538	RIF1	82	80.796	ENSCAPG00000008957	RIF1	96	80.184	Cavia_aperea
ENSFDAG00000006538	RIF1	99	79.724	ENSCPOG00000037898	RIF1	99	79.764	Cavia_porcellus
ENSFDAG00000006538	RIF1	99	73.314	ENSCCAG00000024760	RIF1	99	73.395	Cebus_capucinus
ENSFDAG00000006538	RIF1	99	75.333	ENSCATG00000033353	RIF1	99	75.333	Cercocebus_atys
ENSFDAG00000006538	RIF1	96	82.891	ENSCLAG00000001517	RIF1	99	82.891	Chinchilla_lanigera
ENSFDAG00000006538	RIF1	99	75.242	ENSCSAG00000016089	RIF1	99	75.242	Chlorocebus_sabaeus
ENSFDAG00000006538	RIF1	96	73.478	ENSCHOG00000007187	RIF1	97	73.478	Choloepus_hoffmanni
ENSFDAG00000006538	RIF1	90	68.839	ENSCPBG00000025885	RIF1	96	69.688	Chrysemys_picta_bellii
ENSFDAG00000006538	RIF1	99	74.062	ENSCANG00000028962	RIF1	100	74.747	Colobus_angolensis_palliatus
ENSFDAG00000006538	RIF1	99	69.228	ENSCGRG00001024589	Rif1	100	69.563	Cricetulus_griseus_chok1gshd
ENSFDAG00000006538	RIF1	98	70.545	ENSCGRG00000010713	Rif1	100	70.885	Cricetulus_griseus_crigri
ENSFDAG00000006538	RIF1	62	54.264	ENSCSEG00000003945	rif1	66	54.264	Cynoglossus_semilaevis
ENSFDAG00000006538	RIF1	64	47.816	ENSCVAG00000022479	rif1	68	47.637	Cyprinodon_variegatus
ENSFDAG00000006538	RIF1	51	50.352	ENSDARG00000062650	rif1	52	50.275	Danio_rerio
ENSFDAG00000006538	RIF1	99	72.864	ENSDNOG00000011194	RIF1	97	72.864	Dasypus_novemcinctus
ENSFDAG00000006538	RIF1	94	70.758	ENSETEG00000012421	RIF1	91	70.758	Echinops_telfairi
ENSFDAG00000006538	RIF1	95	91.857	ENSEASG00005023434	RIF1	99	91.857	Equus_asinus_asinus
ENSFDAG00000006538	RIF1	96	88.066	ENSECAG00000012679	RIF1	99	88.066	Equus_caballus
ENSFDAG00000006538	RIF1	64	50.958	ENSELUG00000006826	rif1	56	50.919	Esox_lucius
ENSFDAG00000006538	RIF1	99	74.023	ENSFCAG00000029742	RIF1	99	74.035	Felis_catus
ENSFDAG00000006538	RIF1	77	65.372	ENSFALG00000013874	RIF1	90	65.372	Ficedula_albicollis
ENSFDAG00000006538	RIF1	63	50.041	ENSFHEG00000013721	rif1	65	49.675	Fundulus_heteroclitus
ENSFDAG00000006538	RIF1	56	50.123	ENSGMOG00000003517	rif1	83	50.205	Gadus_morhua
ENSFDAG00000006538	RIF1	81	61.273	ENSGALG00000012484	RIF1	94	61.273	Gallus_gallus
ENSFDAG00000006538	RIF1	66	50.525	ENSGAFG00000017196	rif1	69	53.568	Gambusia_affinis
ENSFDAG00000006538	RIF1	59	53.469	ENSGACG00000008579	rif1	64	53.226	Gasterosteus_aculeatus
ENSFDAG00000006538	RIF1	89	68.466	ENSGAGG00000012595	RIF1	97	69.318	Gopherus_agassizii
ENSFDAG00000006538	RIF1	89	88.857	ENSGGOG00000040178	RIF1	96	88.857	Gorilla_gorilla
ENSFDAG00000006538	RIF1	62	53.600	ENSHBUG00000007125	rif1	67	53.600	Haplochromis_burtoni
ENSFDAG00000006538	RIF1	94	89.836	ENSHGLG00100009807	RIF1	99	89.836	Heterocephalus_glaber_male
ENSFDAG00000006538	RIF1	64	48.736	ENSHCOG00000015943	rif1	60	48.916	Hippocampus_comes
ENSFDAG00000006538	RIF1	64	52.297	ENSIPUG00000021703	rif1	65	52.181	Ictalurus_punctatus
ENSFDAG00000006538	RIF1	99	75.382	ENSSTOG00000020712	RIF1	99	75.392	Ictidomys_tridecemlineatus
ENSFDAG00000006538	RIF1	99	68.195	ENSJJAG00000023000	Rif1	100	68.195	Jaculus_jaculus
ENSFDAG00000006538	RIF1	63	50.795	ENSLBEG00000023196	rif1	59	50.396	Labrus_bergylta
ENSFDAG00000006538	RIF1	63	53.468	ENSLOCG00000002657	rif1	82	50.485	Lepisosteus_oculatus
ENSFDAG00000006538	RIF1	99	73.808	ENSLAFG00000009796	RIF1	100	73.797	Loxodonta_africana
ENSFDAG00000006538	RIF1	99	75.333	ENSMFAG00000032233	RIF1	99	75.333	Macaca_fascicularis
ENSFDAG00000006538	RIF1	99	75.333	ENSMMUG00000008611	RIF1	99	75.333	Macaca_mulatta
ENSFDAG00000006538	RIF1	99	75.252	ENSMNEG00000031616	RIF1	99	75.252	Macaca_nemestrina
ENSFDAG00000006538	RIF1	99	75.293	ENSMLEG00000042945	RIF1	99	75.293	Mandrillus_leucophaeus
ENSFDAG00000006538	RIF1	65	50.267	ENSMZEG00005020920	rif1	71	50.077	Maylandia_zebra
ENSFDAG00000006538	RIF1	84	62.356	ENSMGAG00000012732	RIF1	92	62.356	Meleagris_gallopavo
ENSFDAG00000006538	RIF1	97	89.136	ENSMAUG00000013158	Rif1	100	89.136	Mesocricetus_auratus
ENSFDAG00000006538	RIF1	99	76.914	ENSMICG00000046127	RIF1	99	77.035	Microcebus_murinus
ENSFDAG00000006538	RIF1	99	68.427	ENSMOCG00000009381	Rif1	100	68.427	Microtus_ochrogaster
ENSFDAG00000006538	RIF1	67	49.287	ENSMMOG00000006519	rif1	68	49.199	Mola_mola
ENSFDAG00000006538	RIF1	99	58.579	ENSMODG00000003703	RIF1	99	58.578	Monodelphis_domestica
ENSFDAG00000006538	RIF1	58	52.527	ENSMALG00000016759	rif1	66	52.823	Monopterus_albus
ENSFDAG00000006538	RIF1	99	68.588	MGP_CAROLIEiJ_G0023555	Rif1	100	68.669	Mus_caroli
ENSFDAG00000006538	RIF1	99	69.119	ENSMUSG00000036202	Rif1	100	69.200	Mus_musculus
ENSFDAG00000006538	RIF1	99	68.263	MGP_PahariEiJ_G0025006	Rif1	100	68.263	Mus_pahari
ENSFDAG00000006538	RIF1	99	68.950	MGP_SPRETEiJ_G0024476	Rif1	100	69.234	Mus_spretus
ENSFDAG00000006538	RIF1	99	74.053	ENSMPUG00000000371	RIF1	99	74.053	Mustela_putorius_furo
ENSFDAG00000006538	RIF1	89	71.948	ENSMLUG00000003376	RIF1	100	71.615	Myotis_lucifugus
ENSFDAG00000006538	RIF1	99	71.562	ENSNGAG00000009268	Rif1	99	71.684	Nannospalax_galili
ENSFDAG00000006538	RIF1	62	50.804	ENSNBRG00000014257	rif1	70	49.084	Neolamprologus_brichardi
ENSFDAG00000006538	RIF1	99	73.724	ENSNLEG00000010955	RIF1	99	73.765	Nomascus_leucogenys
ENSFDAG00000006538	RIF1	80	76.233	ENSMEUG00000007601	-	87	76.233	Notamacropus_eugenii
ENSFDAG00000006538	RIF1	99	81.189	ENSODEG00000003950	RIF1	99	81.189	Octodon_degus
ENSFDAG00000006538	RIF1	67	49.924	ENSONIG00000013657	rif1	69	49.846	Oreochromis_niloticus
ENSFDAG00000006538	RIF1	57	70.768	ENSOANG00000006078	-	59	70.768	Ornithorhynchus_anatinus
ENSFDAG00000006538	RIF1	99	73.128	ENSOCUG00000017435	RIF1	99	72.955	Oryctolagus_cuniculus
ENSFDAG00000006538	RIF1	63	47.809	ENSORLG00020001302	rif1	67	47.945	Oryzias_latipes_hni
ENSFDAG00000006538	RIF1	63	48.051	ENSORLG00015000009	rif1	67	48.190	Oryzias_latipes_hsok
ENSFDAG00000006538	RIF1	62	48.032	ENSOMEG00000021513	rif1	66	47.910	Oryzias_melastigma
ENSFDAG00000006538	RIF1	99	73.950	ENSOGAG00000006141	RIF1	99	73.950	Otolemur_garnettii
ENSFDAG00000006538	RIF1	99	73.640	ENSOARG00000008930	RIF1	99	73.701	Ovis_aries
ENSFDAG00000006538	RIF1	99	75.685	ENSPPAG00000023754	RIF1	99	75.726	Pan_paniscus
ENSFDAG00000006538	RIF1	99	73.833	ENSPPRG00000003618	RIF1	99	73.873	Panthera_pardus
ENSFDAG00000006538	RIF1	99	73.913	ENSPTIG00000020652	RIF1	99	73.925	Panthera_tigris_altaica
ENSFDAG00000006538	RIF1	99	75.685	ENSPTRG00000012534	RIF1	99	75.726	Pan_troglodytes
ENSFDAG00000006538	RIF1	99	75.131	ENSPANG00000008525	RIF1	99	75.131	Papio_anubis
ENSFDAG00000006538	RIF1	63	59.118	ENSPMGG00000016141	rif1	73	59.118	Periophthalmus_magnuspinnatus
ENSFDAG00000006538	RIF1	98	71.034	ENSPEMG00000000446	Rif1	99	71.034	Peromyscus_maniculatus_bairdii
ENSFDAG00000006538	RIF1	99	58.333	ENSPCIG00000009185	RIF1	99	58.494	Phascolarctos_cinereus
ENSFDAG00000006538	RIF1	56	51.490	ENSPFOG00000000554	-	65	51.490	Poecilia_formosa
ENSFDAG00000006538	RIF1	63	51.371	ENSPFOG00000017804	rif1	67	51.305	Poecilia_formosa
ENSFDAG00000006538	RIF1	63	50.805	ENSPLAG00000017945	rif1	70	50.651	Poecilia_latipinna
ENSFDAG00000006538	RIF1	53	49.459	ENSPMEG00000006897	-	64	49.459	Poecilia_mexicana
ENSFDAG00000006538	RIF1	64	50.711	ENSPREG00000018052	rif1	69	52.348	Poecilia_reticulata
ENSFDAG00000006538	RIF1	99	75.787	ENSPPYG00000012846	RIF1	99	75.827	Pongo_abelii
ENSFDAG00000006538	RIF1	78	80.583	ENSPCAG00000009032	RIF1	79	80.583	Procavia_capensis
ENSFDAG00000006538	RIF1	99	76.914	ENSPCOG00000027888	RIF1	99	77.035	Propithecus_coquereli
ENSFDAG00000006538	RIF1	92	86.410	ENSPVAG00000014276	RIF1	95	86.410	Pteropus_vampyrus
ENSFDAG00000006538	RIF1	67	48.805	ENSPNYG00000012940	rif1	72	48.602	Pundamilia_nyererei
ENSFDAG00000006538	RIF1	65	51.551	ENSPNAG00000016685	rif1	51	51.551	Pygocentrus_nattereri
ENSFDAG00000006538	RIF1	99	68.257	ENSRNOG00000054901	Rif1	100	68.472	Rattus_norvegicus
ENSFDAG00000006538	RIF1	99	74.485	ENSRBIG00000003704	RIF1	99	74.526	Rhinopithecus_bieti
ENSFDAG00000006538	RIF1	99	75.545	ENSRROG00000028206	RIF1	99	75.545	Rhinopithecus_roxellana
ENSFDAG00000006538	RIF1	96	82.796	ENSSBOG00000029530	RIF1	99	82.796	Saimiri_boliviensis_boliviensis
ENSFDAG00000006538	RIF1	99	57.656	ENSSHAG00000018552	RIF1	100	56.848	Sarcophilus_harrisii
ENSFDAG00000006538	RIF1	62	53.339	ENSSFOG00015021539	rif1	73	50.949	Scleropages_formosus
ENSFDAG00000006538	RIF1	63	50.966	ENSSDUG00000015632	rif1	68	50.688	Seriola_dumerili
ENSFDAG00000006538	RIF1	60	85.000	ENSSARG00000007161	-	62	85.000	Sorex_araneus
ENSFDAG00000006538	RIF1	92	68.678	ENSSPUG00000003062	RIF1	99	68.678	Sphenodon_punctatus
ENSFDAG00000006538	RIF1	51	57.084	ENSSPAG00000018359	rif1	75	61.305	Stegastes_partitus
ENSFDAG00000006538	RIF1	99	74.083	ENSSSCG00000016395	RIF1	99	74.405	Sus_scrofa
ENSFDAG00000006538	RIF1	63	49.560	ENSTRUG00000015808	rif1	69	48.492	Takifugu_rubripes
ENSFDAG00000006538	RIF1	64	48.943	ENSTNIG00000011538	rif1	68	48.928	Tetraodon_nigroviridis
ENSFDAG00000006538	RIF1	82	87.261	ENSTBEG00000016082	RIF1	82	87.261	Tupaia_belangeri
ENSFDAG00000006538	RIF1	99	75.161	ENSTTRG00000011190	RIF1	99	75.161	Tursiops_truncatus
ENSFDAG00000006538	RIF1	86	85.403	ENSUAMG00000026385	RIF1	97	85.403	Ursus_americanus
ENSFDAG00000006538	RIF1	96	85.798	ENSUMAG00000000337	RIF1	99	85.798	Ursus_maritimus
ENSFDAG00000006538	RIF1	99	72.889	ENSVPAG00000002162	RIF1	99	73.083	Vicugna_pacos
ENSFDAG00000006538	RIF1	99	73.720	ENSVVUG00000011293	RIF1	99	73.801	Vulpes_vulpes
ENSFDAG00000006538	RIF1	70	46.382	ENSXETG00000004530	rif1	66	62.874	Xenopus_tropicalis
ENSFDAG00000006538	RIF1	66	48.502	ENSXMAG00000000506	rif1	66	48.565	Xiphophorus_maculatus