EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000006842 (Gene tree)
Gene ID: -
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 40764 bases
Position: chrKN123014.1:7140696-7181459
Accession: 104872497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012760	efThoc1	PF11957.8	3e-146	1	1
ENSFDAP00000012772	efThoc1	PF11957.8	4.3e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025495	THOC1-201	1944	XM_010638743	ENSFDAP00000012772	647 (aa)	XP_010637045	-
ENSFDAT00000030478	THOC1-202	1950	-	ENSFDAP00000012760	649 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000006842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000006842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000006842	THOC1	100	97.063	ENSG00000079134	THOC1	99	97.872	Homo_sapiens
ENSFDAG00000006842	THOC1	100	97.218	ENSAMEG00000006645	THOC1	98	97.218	Ailuropoda_melanoleuca
ENSFDAG00000006842	THOC1	98	69.640	ENSACIG00000019392	thoc1	99	69.315	Amphilophus_citrinellus
ENSFDAG00000006842	THOC1	99	69.626	ENSAOCG00000008391	thoc1	98	69.626	Amphiprion_ocellaris
ENSFDAG00000006842	THOC1	99	73.292	ENSAPEG00000001093	thoc1	98	73.292	Amphiprion_percula
ENSFDAG00000006842	THOC1	99	73.095	ENSATEG00000004783	thoc1	98	73.095	Anabas_testudineus
ENSFDAG00000006842	THOC1	99	89.352	ENSAPLG00000016149	THOC1	98	89.352	Anas_platyrhynchos
ENSFDAG00000006842	THOC1	99	88.854	ENSACAG00000008307	THOC1	96	87.442	Anolis_carolinensis
ENSFDAG00000006842	THOC1	100	95.872	ENSANAG00000033200	THOC1	98	95.872	Aotus_nancymaae
ENSFDAG00000006842	THOC1	99	72.981	ENSACLG00000016836	thoc1	98	72.981	Astatotilapia_calliptera
ENSFDAG00000006842	THOC1	94	71.014	ENSAMXG00000014708	thoc1	97	71.014	Astyanax_mexicanus
ENSFDAG00000006842	THOC1	100	96.754	ENSBTAG00000019215	THOC1	98	96.754	Bos_taurus
ENSFDAG00000006842	THOC1	72	35.000	WBGene00020172	thoc-1	69	35.881	Caenorhabditis_elegans
ENSFDAG00000006842	THOC1	100	96.909	ENSCJAG00000020450	THOC1	98	96.909	Callithrix_jacchus
ENSFDAG00000006842	THOC1	100	97.063	ENSCAFG00000018324	THOC1	98	97.063	Canis_familiaris
ENSFDAG00000006842	THOC1	100	97.063	ENSCAFG00020017894	THOC1	98	97.063	Canis_lupus_dingo
ENSFDAG00000006842	THOC1	100	96.754	ENSCHIG00000015399	THOC1	99	96.714	Capra_hircus
ENSFDAG00000006842	THOC1	100	97.527	ENSTSYG00000010585	THOC1	98	97.527	Carlito_syrichta
ENSFDAG00000006842	THOC1	99	72.136	ENSCAPG00000016270	THOC1	98	72.291	Cavia_aperea
ENSFDAG00000006842	THOC1	100	97.682	ENSCPOG00000000959	THOC1	98	97.682	Cavia_porcellus
ENSFDAG00000006842	THOC1	100	97.063	ENSCCAG00000025766	THOC1	98	97.063	Cebus_capucinus
ENSFDAG00000006842	THOC1	100	93.663	ENSCATG00000028180	THOC1	99	96.067	Cercocebus_atys
ENSFDAG00000006842	THOC1	99	98.905	ENSCLAG00000009117	THOC1	100	98.905	Chinchilla_lanigera
ENSFDAG00000006842	THOC1	100	97.218	ENSCSAG00000017631	THOC1	98	97.218	Chlorocebus_sabaeus
ENSFDAG00000006842	THOC1	81	95.062	ENSCHOG00000010609	THOC1	79	95.062	Choloepus_hoffmanni
ENSFDAG00000006842	THOC1	100	92.593	ENSCPBG00000027558	THOC1	99	92.593	Chrysemys_picta_bellii
ENSFDAG00000006842	THOC1	73	48.875	ENSCING00000007663	-	98	48.875	Ciona_intestinalis
ENSFDAG00000006842	THOC1	94	47.861	ENSCSAVG00000010649	-	99	47.068	Ciona_savignyi
ENSFDAG00000006842	THOC1	100	97.063	ENSCANG00000034265	THOC1	98	97.063	Colobus_angolensis_palliatus
ENSFDAG00000006842	THOC1	100	95.518	ENSCGRG00001016464	Thoc1	98	95.518	Cricetulus_griseus_chok1gshd
ENSFDAG00000006842	THOC1	91	78.885	ENSCGRG00000003390	-	99	78.885	Cricetulus_griseus_crigri
ENSFDAG00000006842	THOC1	99	95.618	ENSCGRG00000010269	-	100	95.618	Cricetulus_griseus_crigri
ENSFDAG00000006842	THOC1	99	71.495	ENSCSEG00000012486	thoc1	99	72.669	Cynoglossus_semilaevis
ENSFDAG00000006842	THOC1	99	72.050	ENSCVAG00000020600	thoc1	98	72.050	Cyprinodon_variegatus
ENSFDAG00000006842	THOC1	99	74.534	ENSDARG00000088246	thoc1	98	74.534	Danio_rerio
ENSFDAG00000006842	THOC1	100	97.218	ENSDNOG00000019217	THOC1	98	97.218	Dasypus_novemcinctus
ENSFDAG00000006842	THOC1	99	91.706	ENSDORG00000008060	Thoc1	99	91.549	Dipodomys_ordii
ENSFDAG00000006842	THOC1	94	37.293	FBgn0037382	Hpr1	74	41.682	Drosophila_melanogaster
ENSFDAG00000006842	THOC1	91	74.915	ENSETEG00000004165	THOC1	98	74.915	Echinops_telfairi
ENSFDAG00000006842	THOC1	93	64.452	ENSEBUG00000005998	thoc1	98	65.781	Eptatretus_burgeri
ENSFDAG00000006842	THOC1	100	97.063	ENSEASG00005002549	THOC1	94	97.063	Equus_asinus_asinus
ENSFDAG00000006842	THOC1	100	97.527	ENSECAG00000009267	THOC1	88	97.527	Equus_caballus
ENSFDAG00000006842	THOC1	81	78.000	ENSEEUG00000012214	-	82	78.000	Erinaceus_europaeus
ENSFDAG00000006842	THOC1	99	72.811	ENSELUG00000023277	thoc1	98	72.811	Esox_lucius
ENSFDAG00000006842	THOC1	100	96.909	ENSFCAG00000022454	THOC1	85	96.909	Felis_catus
ENSFDAG00000006842	THOC1	99	90.980	ENSFALG00000006205	THOC1	99	90.980	Ficedula_albicollis
ENSFDAG00000006842	THOC1	99	71.739	ENSFHEG00000008841	thoc1	98	71.739	Fundulus_heteroclitus
ENSFDAG00000006842	THOC1	99	72.643	ENSGMOG00000011486	thoc1	98	72.643	Gadus_morhua
ENSFDAG00000006842	THOC1	100	90.123	ENSGALG00000014915	THOC1	99	89.024	Gallus_gallus
ENSFDAG00000006842	THOC1	99	72.205	ENSGAFG00000021464	thoc1	98	72.205	Gambusia_affinis
ENSFDAG00000006842	THOC1	99	72.784	ENSGACG00000017361	thoc1	98	72.671	Gasterosteus_aculeatus
ENSFDAG00000006842	THOC1	100	92.438	ENSGAGG00000021230	-	97	92.438	Gopherus_agassizii
ENSFDAG00000006842	THOC1	100	97.218	ENSGGOG00000003013	THOC1	98	97.218	Gorilla_gorilla
ENSFDAG00000006842	THOC1	99	72.981	ENSHBUG00000009096	thoc1	98	72.981	Haplochromis_burtoni
ENSFDAG00000006842	THOC1	80	91.710	ENSHGLG00000009264	-	99	91.710	Heterocephalus_glaber_female
ENSFDAG00000006842	THOC1	100	98.145	ENSHGLG00000003712	-	98	98.145	Heterocephalus_glaber_female
ENSFDAG00000006842	THOC1	100	98.609	ENSHGLG00100003570	THOC1	98	98.609	Heterocephalus_glaber_male
ENSFDAG00000006842	THOC1	78	90.155	ENSHGLG00100002225	-	99	90.155	Heterocephalus_glaber_male
ENSFDAG00000006842	THOC1	91	73.814	ENSIPUG00000005306	thoc1	99	73.624	Ictalurus_punctatus
ENSFDAG00000006842	THOC1	100	97.218	ENSSTOG00000006484	THOC1	98	97.218	Ictidomys_tridecemlineatus
ENSFDAG00000006842	THOC1	53	93.824	ENSJJAG00000014893	-	96	93.824	Jaculus_jaculus
ENSFDAG00000006842	THOC1	99	71.957	ENSKMAG00000003904	thoc1	99	71.957	Kryptolebias_marmoratus
ENSFDAG00000006842	THOC1	99	72.981	ENSLBEG00000020372	thoc1	96	72.981	Labrus_bergylta
ENSFDAG00000006842	THOC1	99	80.401	ENSLACG00000014869	THOC1	99	79.444	Latimeria_chalumnae
ENSFDAG00000006842	THOC1	99	77.519	ENSLOCG00000002097	thoc1	98	76.863	Lepisosteus_oculatus
ENSFDAG00000006842	THOC1	100	96.909	ENSLAFG00000009585	THOC1	98	96.909	Loxodonta_africana
ENSFDAG00000006842	THOC1	100	97.218	ENSMFAG00000041520	THOC1	98	97.218	Macaca_fascicularis
ENSFDAG00000006842	THOC1	100	97.218	ENSMMUG00000004662	THOC1	98	97.218	Macaca_mulatta
ENSFDAG00000006842	THOC1	100	97.218	ENSMNEG00000040177	THOC1	98	97.218	Macaca_nemestrina
ENSFDAG00000006842	THOC1	100	97.218	ENSMLEG00000034201	THOC1	98	97.218	Mandrillus_leucophaeus
ENSFDAG00000006842	THOC1	96	72.990	ENSMAMG00000016747	thoc1	99	72.990	Mastacembelus_armatus
ENSFDAG00000006842	THOC1	99	72.981	ENSMZEG00005024609	thoc1	98	72.981	Maylandia_zebra
ENSFDAG00000006842	THOC1	99	89.875	ENSMGAG00000009811	THOC1	100	89.875	Meleagris_gallopavo
ENSFDAG00000006842	THOC1	100	95.518	ENSMAUG00000010272	Thoc1	98	95.518	Mesocricetus_auratus
ENSFDAG00000006842	THOC1	100	97.372	ENSMICG00000027200	THOC1	98	97.372	Microcebus_murinus
ENSFDAG00000006842	THOC1	100	82.844	ENSMOCG00000014924	-	95	82.844	Microtus_ochrogaster
ENSFDAG00000006842	THOC1	99	94.272	ENSMOCG00000014536	-	85	94.272	Microtus_ochrogaster
ENSFDAG00000006842	THOC1	94	72.876	ENSMMOG00000011772	thoc1	100	72.876	Mola_mola
ENSFDAG00000006842	THOC1	100	93.740	ENSMODG00000021482	THOC1	98	93.740	Monodelphis_domestica
ENSFDAG00000006842	THOC1	99	73.406	ENSMALG00000021872	thoc1	98	73.406	Monopterus_albus
ENSFDAG00000006842	THOC1	100	95.827	MGP_CAROLIEiJ_G0021989	Thoc1	98	95.827	Mus_caroli
ENSFDAG00000006842	THOC1	100	95.981	ENSMUSG00000024287	Thoc1	100	97.872	Mus_musculus
ENSFDAG00000006842	THOC1	100	95.981	MGP_PahariEiJ_G0018726	Thoc1	98	95.981	Mus_pahari
ENSFDAG00000006842	THOC1	100	95.827	MGP_SPRETEiJ_G0022905	Thoc1	98	95.827	Mus_spretus
ENSFDAG00000006842	THOC1	100	97.218	ENSMPUG00000005448	THOC1	98	97.218	Mustela_putorius_furo
ENSFDAG00000006842	THOC1	60	84.197	ENSMLUG00000024912	-	97	84.197	Myotis_lucifugus
ENSFDAG00000006842	THOC1	89	84.708	ENSMLUG00000027965	-	99	83.249	Myotis_lucifugus
ENSFDAG00000006842	THOC1	100	96.605	ENSMLUG00000004090	-	98	96.605	Myotis_lucifugus
ENSFDAG00000006842	THOC1	99	76.646	ENSNGAG00000008061	-	99	76.443	Nannospalax_galili
ENSFDAG00000006842	THOC1	100	96.600	ENSNGAG00000001401	-	98	96.600	Nannospalax_galili
ENSFDAG00000006842	THOC1	98	72.770	ENSNBRG00000005991	thoc1	98	72.770	Neolamprologus_brichardi
ENSFDAG00000006842	THOC1	100	97.218	ENSNLEG00000006835	THOC1	98	97.218	Nomascus_leucogenys
ENSFDAG00000006842	THOC1	99	82.003	ENSMEUG00000009756	THOC1	99	82.003	Notamacropus_eugenii
ENSFDAG00000006842	THOC1	100	77.434	ENSOPRG00000001108	THOC1	98	77.434	Ochotona_princeps
ENSFDAG00000006842	THOC1	100	92.581	ENSODEG00000006623	THOC1	98	92.581	Octodon_degus
ENSFDAG00000006842	THOC1	99	73.406	ENSONIG00000009440	thoc1	97	73.406	Oreochromis_niloticus
ENSFDAG00000006842	THOC1	100	97.836	ENSOCUG00000011601	THOC1	98	97.836	Oryctolagus_cuniculus
ENSFDAG00000006842	THOC1	99	72.205	ENSORLG00000017629	thoc1	98	72.205	Oryzias_latipes
ENSFDAG00000006842	THOC1	99	72.205	ENSORLG00020007567	thoc1	98	72.205	Oryzias_latipes_hni
ENSFDAG00000006842	THOC1	99	72.360	ENSORLG00015007356	thoc1	98	72.360	Oryzias_latipes_hsok
ENSFDAG00000006842	THOC1	99	70.807	ENSOMEG00000008200	thoc1	98	71.584	Oryzias_melastigma
ENSFDAG00000006842	THOC1	100	93.972	ENSOGAG00000000470	THOC1	98	93.972	Otolemur_garnettii
ENSFDAG00000006842	THOC1	99	96.279	ENSOARG00000009238	THOC1	98	96.279	Ovis_aries
ENSFDAG00000006842	THOC1	100	97.218	ENSPPAG00000031812	THOC1	98	97.218	Pan_paniscus
ENSFDAG00000006842	THOC1	100	96.600	ENSPPRG00000023794	THOC1	99	96.067	Panthera_pardus
ENSFDAG00000006842	THOC1	100	96.600	ENSPTIG00000007469	THOC1	99	96.067	Panthera_tigris_altaica
ENSFDAG00000006842	THOC1	100	96.330	ENSPTRG00000009816	THOC1	98	96.330	Pan_troglodytes
ENSFDAG00000006842	THOC1	100	96.160	ENSPANG00000008665	THOC1	98	96.160	Papio_anubis
ENSFDAG00000006842	THOC1	99	72.601	ENSPKIG00000005906	thoc1	98	73.375	Paramormyrops_kingsleyae
ENSFDAG00000006842	THOC1	82	94.371	ENSPSIG00000007691	THOC1	98	94.371	Pelodiscus_sinensis
ENSFDAG00000006842	THOC1	94	73.096	ENSPMGG00000008279	thoc1	95	73.096	Periophthalmus_magnuspinnatus
ENSFDAG00000006842	THOC1	100	95.981	ENSPEMG00000021789	Thoc1	98	95.981	Peromyscus_maniculatus_bairdii
ENSFDAG00000006842	THOC1	75	93.927	ENSPCIG00000026942	THOC1	98	93.927	Phascolarctos_cinereus
ENSFDAG00000006842	THOC1	99	72.162	ENSPFOG00000011673	thoc1	98	72.162	Poecilia_formosa
ENSFDAG00000006842	THOC1	99	72.050	ENSPLAG00000019648	thoc1	98	72.050	Poecilia_latipinna
ENSFDAG00000006842	THOC1	99	72.162	ENSPMEG00000007083	thoc1	98	72.162	Poecilia_mexicana
ENSFDAG00000006842	THOC1	99	71.894	ENSPREG00000006719	thoc1	98	71.894	Poecilia_reticulata
ENSFDAG00000006842	THOC1	74	97.694	ENSPPYG00000009049	-	97	97.694	Pongo_abelii
ENSFDAG00000006842	THOC1	100	87.017	ENSPCAG00000005320	THOC1	98	87.017	Procavia_capensis
ENSFDAG00000006842	THOC1	100	96.754	ENSPCOG00000009234	THOC1	98	96.754	Propithecus_coquereli
ENSFDAG00000006842	THOC1	100	95.054	ENSPVAG00000004007	THOC1	98	95.054	Pteropus_vampyrus
ENSFDAG00000006842	THOC1	99	72.981	ENSPNYG00000019152	thoc1	98	72.981	Pundamilia_nyererei
ENSFDAG00000006842	THOC1	99	74.455	ENSPNAG00000023390	thoc1	98	74.455	Pygocentrus_nattereri
ENSFDAG00000006842	THOC1	83	85.156	ENSRNOG00000015332	Thoc1	96	85.156	Rattus_norvegicus
ENSFDAG00000006842	THOC1	100	96.177	ENSRBIG00000033738	THOC1	98	98.053	Rhinopithecus_bieti
ENSFDAG00000006842	THOC1	100	97.218	ENSRROG00000044988	THOC1	98	97.218	Rhinopithecus_roxellana
ENSFDAG00000006842	THOC1	100	96.600	ENSSBOG00000016556	THOC1	98	96.600	Saimiri_boliviensis_boliviensis
ENSFDAG00000006842	THOC1	100	94.599	ENSSHAG00000014829	THOC1	98	94.599	Sarcophilus_harrisii
ENSFDAG00000006842	THOC1	99	75.155	ENSSFOG00015021527	thoc1	98	75.155	Scleropages_formosus
ENSFDAG00000006842	THOC1	94	73.693	ENSSMAG00000018465	thoc1	94	73.693	Scophthalmus_maximus
ENSFDAG00000006842	THOC1	99	73.717	ENSSDUG00000016810	thoc1	98	73.717	Seriola_dumerili
ENSFDAG00000006842	THOC1	99	73.406	ENSSLDG00000015555	thoc1	98	73.406	Seriola_lalandi_dorsalis
ENSFDAG00000006842	THOC1	88	95.618	ENSSARG00000006910	THOC1	86	95.618	Sorex_araneus
ENSFDAG00000006842	THOC1	99	89.286	ENSSPUG00000007238	THOC1	98	89.302	Sphenodon_punctatus
ENSFDAG00000006842	THOC1	99	69.969	ENSSPAG00000018847	thoc1	98	69.969	Stegastes_partitus
ENSFDAG00000006842	THOC1	100	97.372	ENSSSCG00000025653	THOC1	93	97.372	Sus_scrofa
ENSFDAG00000006842	THOC1	100	90.895	ENSTGUG00000010204	THOC1	99	90.895	Taeniopygia_guttata
ENSFDAG00000006842	THOC1	99	72.050	ENSTRUG00000013518	thoc1	98	72.050	Takifugu_rubripes
ENSFDAG00000006842	THOC1	99	72.826	ENSTNIG00000008473	thoc1	98	72.826	Tetraodon_nigroviridis
ENSFDAG00000006842	THOC1	100	89.490	ENSTBEG00000016920	THOC1	98	89.490	Tupaia_belangeri
ENSFDAG00000006842	THOC1	100	89.799	ENSTTRG00000016664	THOC1	98	89.799	Tursiops_truncatus
ENSFDAG00000006842	THOC1	100	97.063	ENSUAMG00000002527	THOC1	99	96.395	Ursus_americanus
ENSFDAG00000006842	THOC1	100	97.063	ENSUMAG00000019693	THOC1	98	97.063	Ursus_maritimus
ENSFDAG00000006842	THOC1	68	94.500	ENSVPAG00000003726	-	67	94.500	Vicugna_pacos
ENSFDAG00000006842	THOC1	100	97.063	ENSVVUG00000004384	THOC1	98	97.063	Vulpes_vulpes
ENSFDAG00000006842	THOC1	99	79.294	ENSXETG00000003155	thoc1	96	79.294	Xenopus_tropicalis
ENSFDAG00000006842	THOC1	94	70.049	ENSXCOG00000016085	thoc1	89	70.049	Xiphophorus_couchianus
ENSFDAG00000006842	THOC1	99	72.205	ENSXMAG00000002353	thoc1	98	72.205	Xiphophorus_maculatus