EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000007288 (Gene tree)
Gene ID: 104851447
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 67883 bases
Position: chrKN124353.1:10606715-10674597
Accession: 104851447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022017	Npa1	PF11707.8	2.9e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000010488	URB1-201	10340	XM_010608631	ENSFDAP00000022017	2384 (aa)	XP_010606933	-

Gene Model

Click here to download ENSFDAG00000007288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000007288	URB1	95	81.261	ENSG00000142207	URB1	100	81.124	Homo_sapiens
ENSFDAG00000007288	URB1	95	42.814	ENSAPOG00000020308	urb1	99	43.197	Acanthochromis_polyacanthus
ENSFDAG00000007288	URB1	95	77.910	ENSAMEG00000011998	URB1	99	77.997	Ailuropoda_melanoleuca
ENSFDAG00000007288	URB1	90	44.594	ENSACIG00000003248	urb1	96	44.640	Amphilophus_citrinellus
ENSFDAG00000007288	URB1	95	40.513	ENSAOCG00000010364	urb1	100	40.644	Amphiprion_ocellaris
ENSFDAG00000007288	URB1	92	51.949	ENSAPEG00000010758	urb1	99	51.844	Amphiprion_percula
ENSFDAG00000007288	URB1	93	44.913	ENSATEG00000011790	urb1	97	44.922	Anabas_testudineus
ENSFDAG00000007288	URB1	92	55.700	ENSAPLG00000012791	URB1	100	55.685	Anas_platyrhynchos
ENSFDAG00000007288	URB1	95	51.958	ENSACAG00000002817	URB1	99	51.805	Anolis_carolinensis
ENSFDAG00000007288	URB1	95	80.079	ENSANAG00000024617	URB1	100	80.079	Aotus_nancymaae
ENSFDAG00000007288	URB1	95	44.710	ENSACLG00000024865	urb1	99	45.086	Astatotilapia_calliptera
ENSFDAG00000007288	URB1	94	40.675	ENSAMXG00000012306	urb1	98	40.573	Astyanax_mexicanus
ENSFDAG00000007288	URB1	95	75.306	ENSBTAG00000012412	URB1	99	75.306	Bos_taurus
ENSFDAG00000007288	URB1	95	80.114	ENSCJAG00000009118	URB1	100	80.114	Callithrix_jacchus
ENSFDAG00000007288	URB1	95	77.462	ENSCAFG00000008892	URB1	100	77.462	Canis_familiaris
ENSFDAG00000007288	URB1	95	76.251	ENSCAFG00020025994	-	100	76.251	Canis_lupus_dingo
ENSFDAG00000007288	URB1	95	77.305	ENSCAFG00020025987	-	100	77.305	Canis_lupus_dingo
ENSFDAG00000007288	URB1	95	75.175	ENSCHIG00000015645	URB1	99	75.219	Capra_hircus
ENSFDAG00000007288	URB1	95	79.974	ENSTSYG00000013286	URB1	99	79.974	Carlito_syrichta
ENSFDAG00000007288	URB1	93	83.640	ENSCAPG00000015589	URB1	99	83.640	Cavia_aperea
ENSFDAG00000007288	URB1	95	85.174	ENSCPOG00000006748	URB1	99	85.174	Cavia_porcellus
ENSFDAG00000007288	URB1	95	80.465	ENSCCAG00000021299	URB1	100	80.465	Cebus_capucinus
ENSFDAG00000007288	URB1	95	80.509	ENSCATG00000042630	URB1	100	80.509	Cercocebus_atys
ENSFDAG00000007288	URB1	95	86.324	ENSCLAG00000005262	URB1	100	86.324	Chinchilla_lanigera
ENSFDAG00000007288	URB1	95	79.108	ENSCSAG00000009584	URB1	100	79.108	Chlorocebus_sabaeus
ENSFDAG00000007288	URB1	95	57.043	ENSCPBG00000006454	URB1	99	57.357	Chrysemys_picta_bellii
ENSFDAG00000007288	URB1	95	80.641	ENSCANG00000031088	URB1	100	80.641	Colobus_angolensis_palliatus
ENSFDAG00000007288	URB1	94	76.258	ENSCGRG00001010616	Urb1	99	75.901	Cricetulus_griseus_chok1gshd
ENSFDAG00000007288	URB1	93	75.910	ENSCGRG00000015840	Urb1	99	75.910	Cricetulus_griseus_crigri
ENSFDAG00000007288	URB1	94	42.820	ENSCSEG00000012616	urb1	99	42.845	Cynoglossus_semilaevis
ENSFDAG00000007288	URB1	88	55.097	ENSCVAG00000009076	urb1	96	55.057	Cyprinodon_variegatus
ENSFDAG00000007288	URB1	95	43.259	ENSDARG00000060308	urb1	99	43.598	Danio_rerio
ENSFDAG00000007288	URB1	81	76.871	ENSDNOG00000015586	URB1	99	76.871	Dasypus_novemcinctus
ENSFDAG00000007288	URB1	95	79.121	ENSDORG00000006735	Urb1	100	79.121	Dipodomys_ordii
ENSFDAG00000007288	URB1	88	80.000	ENSETEG00000009080	URB1	92	80.000	Echinops_telfairi
ENSFDAG00000007288	URB1	95	77.841	ENSEASG00005007711	URB1	100	77.841	Equus_asinus_asinus
ENSFDAG00000007288	URB1	92	87.729	ENSECAG00000013206	URB1	99	87.729	Equus_caballus
ENSFDAG00000007288	URB1	54	85.000	ENSEEUG00000003626	-	58	85.000	Erinaceus_europaeus
ENSFDAG00000007288	URB1	95	44.663	ENSELUG00000020516	urb1	99	44.503	Esox_lucius
ENSFDAG00000007288	URB1	95	77.612	ENSFCAG00000002177	URB1	100	77.612	Felis_catus
ENSFDAG00000007288	URB1	93	50.374	ENSFALG00000004636	URB1	99	50.617	Ficedula_albicollis
ENSFDAG00000007288	URB1	95	41.822	ENSFHEG00000000202	urb1	99	42.757	Fundulus_heteroclitus
ENSFDAG00000007288	URB1	89	46.805	ENSGMOG00000001838	urb1	94	46.875	Gadus_morhua
ENSFDAG00000007288	URB1	95	55.643	ENSGALG00000015887	URB1	99	55.683	Gallus_gallus
ENSFDAG00000007288	URB1	90	52.436	ENSGAFG00000020694	urb1	97	53.037	Gambusia_affinis
ENSFDAG00000007288	URB1	94	44.508	ENSGACG00000011703	urb1	99	44.562	Gasterosteus_aculeatus
ENSFDAG00000007288	URB1	95	56.950	ENSGAGG00000022544	URB1	99	57.256	Gopherus_agassizii
ENSFDAG00000007288	URB1	95	81.212	ENSGGOG00000000285	URB1	100	81.212	Gorilla_gorilla
ENSFDAG00000007288	URB1	95	44.885	ENSHBUG00000001904	urb1	99	45.194	Haplochromis_burtoni
ENSFDAG00000007288	URB1	95	88.325	ENSHGLG00000004907	URB1	99	88.325	Heterocephalus_glaber_female
ENSFDAG00000007288	URB1	95	89.094	ENSHGLG00100010749	URB1	99	89.094	Heterocephalus_glaber_male
ENSFDAG00000007288	URB1	69	48.638	ENSHCOG00000018683	urb1	96	49.222	Hippocampus_comes
ENSFDAG00000007288	URB1	94	40.419	ENSIPUG00000014721	urb1	99	40.703	Ictalurus_punctatus
ENSFDAG00000007288	URB1	95	81.074	ENSSTOG00000004539	URB1	99	81.074	Ictidomys_tridecemlineatus
ENSFDAG00000007288	URB1	85	54.292	ENSKMAG00000006001	urb1	98	54.252	Kryptolebias_marmoratus
ENSFDAG00000007288	URB1	90	50.787	ENSLBEG00000027208	urb1	98	51.288	Labrus_bergylta
ENSFDAG00000007288	URB1	95	47.758	ENSLACG00000017059	URB1	99	47.758	Latimeria_chalumnae
ENSFDAG00000007288	URB1	94	46.393	ENSLOCG00000009190	urb1	97	46.460	Lepisosteus_oculatus
ENSFDAG00000007288	URB1	95	75.954	ENSLAFG00000010407	URB1	99	75.954	Loxodonta_africana
ENSFDAG00000007288	URB1	98	79.343	ENSMFAG00000034391	URB1	98	79.356	Macaca_fascicularis
ENSFDAG00000007288	URB1	95	80.465	ENSMMUG00000010295	URB1	100	80.465	Macaca_mulatta
ENSFDAG00000007288	URB1	95	79.192	ENSMNEG00000032981	URB1	100	79.192	Macaca_nemestrina
ENSFDAG00000007288	URB1	95	80.729	ENSMLEG00000041435	URB1	100	80.729	Mandrillus_leucophaeus
ENSFDAG00000007288	URB1	95	43.576	ENSMAMG00000011238	urb1	99	43.777	Mastacembelus_armatus
ENSFDAG00000007288	URB1	95	40.907	ENSMZEG00005011862	urb1	99	42.142	Maylandia_zebra
ENSFDAG00000007288	URB1	93	55.709	ENSMGAG00000014512	URB1	99	55.709	Meleagris_gallopavo
ENSFDAG00000007288	URB1	89	79.854	ENSMAUG00000010516	Urb1	99	79.854	Mesocricetus_auratus
ENSFDAG00000007288	URB1	95	79.842	ENSMICG00000016424	URB1	99	79.666	Microcebus_murinus
ENSFDAG00000007288	URB1	95	73.680	ENSMOCG00000012613	Urb1	99	73.965	Microtus_ochrogaster
ENSFDAG00000007288	URB1	95	62.571	ENSMODG00000021076	URB1	99	62.571	Monodelphis_domestica
ENSFDAG00000007288	URB1	95	42.149	ENSMALG00000017411	urb1	99	51.691	Monopterus_albus
ENSFDAG00000007288	URB1	95	75.429	MGP_CAROLIEiJ_G0020948	Urb1	99	75.429	Mus_caroli
ENSFDAG00000007288	URB1	95	75.648	ENSMUSG00000039929	Urb1	99	75.648	Mus_musculus
ENSFDAG00000007288	URB1	95	75.473	MGP_PahariEiJ_G0016653	Urb1	99	75.473	Mus_pahari
ENSFDAG00000007288	URB1	95	75.715	MGP_SPRETEiJ_G0021854	Urb1	99	75.782	Mus_spretus
ENSFDAG00000007288	URB1	95	77.099	ENSMPUG00000001123	URB1	100	77.099	Mustela_putorius_furo
ENSFDAG00000007288	URB1	95	76.727	ENSNGAG00000001905	Urb1	99	76.727	Nannospalax_galili
ENSFDAG00000007288	URB1	78	45.622	ENSNBRG00000001049	urb1	98	46.025	Neolamprologus_brichardi
ENSFDAG00000007288	URB1	95	79.189	ENSNLEG00000026872	URB1	100	79.061	Nomascus_leucogenys
ENSFDAG00000007288	URB1	91	58.594	ENSMEUG00000010828	URB1	96	58.850	Notamacropus_eugenii
ENSFDAG00000007288	URB1	95	71.868	ENSOPRG00000013482	URB1	100	71.692	Ochotona_princeps
ENSFDAG00000007288	URB1	95	84.345	ENSODEG00000002587	URB1	99	84.345	Octodon_degus
ENSFDAG00000007288	URB1	95	44.972	ENSONIG00000005599	urb1	99	45.214	Oreochromis_niloticus
ENSFDAG00000007288	URB1	95	78.272	ENSOCUG00000009381	URB1	99	78.272	Oryctolagus_cuniculus
ENSFDAG00000007288	URB1	95	43.594	ENSORLG00000003429	urb1	99	43.689	Oryzias_latipes
ENSFDAG00000007288	URB1	95	43.493	ENSORLG00020013785	urb1	99	43.555	Oryzias_latipes_hni
ENSFDAG00000007288	URB1	91	46.237	ENSORLG00015019421	urb1	97	46.386	Oryzias_latipes_hsok
ENSFDAG00000007288	URB1	75	49.379	ENSOMEG00000002094	urb1	98	49.379	Oryzias_melastigma
ENSFDAG00000007288	URB1	95	79.613	ENSOGAG00000017140	URB1	100	79.613	Otolemur_garnettii
ENSFDAG00000007288	URB1	92	75.781	ENSOARG00000013679	URB1	99	75.696	Ovis_aries
ENSFDAG00000007288	URB1	95	81.343	ENSPPAG00000003423	URB1	100	81.343	Pan_paniscus
ENSFDAG00000007288	URB1	95	77.700	ENSPPRG00000023131	URB1	100	77.700	Panthera_pardus
ENSFDAG00000007288	URB1	88	76.621	ENSPTIG00000016125	URB1	97	77.041	Panthera_tigris_altaica
ENSFDAG00000007288	URB1	95	81.212	ENSPTRG00000013852	URB1	100	81.212	Pan_troglodytes
ENSFDAG00000007288	URB1	95	80.773	ENSPANG00000021964	URB1	100	80.773	Papio_anubis
ENSFDAG00000007288	URB1	95	46.271	ENSPKIG00000003683	urb1	99	46.335	Paramormyrops_kingsleyae
ENSFDAG00000007288	URB1	95	75.198	ENSPEMG00000021205	Urb1	99	75.198	Peromyscus_maniculatus_bairdii
ENSFDAG00000007288	URB1	67	36.497	ENSPMAG00000009733	URB1	99	34.146	Petromyzon_marinus
ENSFDAG00000007288	URB1	95	61.992	ENSPCIG00000016350	URB1	99	62.545	Phascolarctos_cinereus
ENSFDAG00000007288	URB1	92	42.973	ENSPLAG00000004371	urb1	100	42.973	Poecilia_latipinna
ENSFDAG00000007288	URB1	95	43.556	ENSPMEG00000006634	urb1	99	43.670	Poecilia_mexicana
ENSFDAG00000007288	URB1	95	43.723	ENSPREG00000013453	urb1	99	43.885	Poecilia_reticulata
ENSFDAG00000007288	URB1	95	80.908	ENSPPYG00000011359	URB1	100	80.773	Pongo_abelii
ENSFDAG00000007288	URB1	95	65.683	ENSPCAG00000007430	URB1	99	65.683	Procavia_capensis
ENSFDAG00000007288	URB1	95	80.545	ENSPCOG00000022695	URB1	100	80.545	Propithecus_coquereli
ENSFDAG00000007288	URB1	95	76.383	ENSPVAG00000000889	URB1	100	76.383	Pteropus_vampyrus
ENSFDAG00000007288	URB1	95	43.391	ENSPNYG00000010589	urb1	99	43.681	Pundamilia_nyererei
ENSFDAG00000007288	URB1	95	40.226	ENSPNAG00000019324	urb1	98	40.641	Pygocentrus_nattereri
ENSFDAG00000007288	URB1	95	75.736	ENSRNOG00000002080	Urb1	99	75.736	Rattus_norvegicus
ENSFDAG00000007288	URB1	95	80.334	ENSRBIG00000033122	URB1	100	80.334	Rhinopithecus_bieti
ENSFDAG00000007288	URB1	95	80.421	ENSRROG00000040237	URB1	100	80.421	Rhinopithecus_roxellana
ENSFDAG00000007288	URB1	95	80.254	ENSSBOG00000027672	URB1	100	80.254	Saimiri_boliviensis_boliviensis
ENSFDAG00000007288	URB1	95	61.649	ENSSHAG00000005140	URB1	100	61.632	Sarcophilus_harrisii
ENSFDAG00000007288	URB1	89	45.845	ENSSFOG00015000339	urb1	98	46.384	Scleropages_formosus
ENSFDAG00000007288	URB1	95	44.024	ENSSMAG00000003782	urb1	99	44.191	Scophthalmus_maximus
ENSFDAG00000007288	URB1	95	44.709	ENSSDUG00000012313	urb1	99	44.849	Seriola_dumerili
ENSFDAG00000007288	URB1	95	44.802	ENSSLDG00000023179	urb1	99	44.672	Seriola_lalandi_dorsalis
ENSFDAG00000007288	URB1	95	53.846	ENSSPUG00000012447	URB1	98	54.301	Sphenodon_punctatus
ENSFDAG00000007288	URB1	95	43.663	ENSSPAG00000006325	urb1	99	43.967	Stegastes_partitus
ENSFDAG00000007288	URB1	95	76.163	ENSSSCG00000032024	URB1	100	76.032	Sus_scrofa
ENSFDAG00000007288	URB1	70	57.857	ENSTGUG00000013442	URB1	100	57.857	Taeniopygia_guttata
ENSFDAG00000007288	URB1	95	43.647	ENSTRUG00000009372	urb1	99	43.492	Takifugu_rubripes
ENSFDAG00000007288	URB1	94	42.895	ENSTNIG00000016277	urb1	99	42.914	Tetraodon_nigroviridis
ENSFDAG00000007288	URB1	77	82.370	ENSTBEG00000010044	URB1	81	82.370	Tupaia_belangeri
ENSFDAG00000007288	URB1	86	77.662	ENSTTRG00000007712	URB1	92	77.975	Tursiops_truncatus
ENSFDAG00000007288	URB1	95	77.734	ENSUAMG00000012231	URB1	99	77.734	Ursus_americanus
ENSFDAG00000007288	URB1	88	78.152	ENSUMAG00000017419	URB1	97	79.013	Ursus_maritimus
ENSFDAG00000007288	URB1	65	89.116	ENSVPAG00000001164	URB1	68	89.116	Vicugna_pacos
ENSFDAG00000007288	URB1	95	76.974	ENSVVUG00000000551	URB1	100	76.974	Vulpes_vulpes
ENSFDAG00000007288	URB1	95	49.439	ENSXETG00000009895	urb1	99	49.651	Xenopus_tropicalis
ENSFDAG00000007288	URB1	95	41.852	ENSXCOG00000005500	urb1	99	42.005	Xiphophorus_couchianus
ENSFDAG00000007288	URB1	95	41.889	ENSXMAG00000007253	urb1	99	41.898	Xiphophorus_maculatus