EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000007386 (Gene tree)
Gene ID: 104854791
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 9369 bases
Position: chrKN125026.1:952903-962271
Accession: 104854791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000021891	zf-CCCH	PF00642.24	7.1e-05	1	1
ENSFDAP00000021888	zf-CCCH	PF00642.24	7.5e-05	1	1
ENSFDAP00000021888	TRM	PF02005.16	1.5e-148	1	1
ENSFDAP00000021891	TRM	PF02005.16	3.9e-140	1	1
ENSFDAP00000021891	Met_10	PF02475.16	1.7e-06	1	1
ENSFDAP00000021888	Met_10	PF02475.16	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000010598	TRMT1-201	1893	-	ENSFDAP00000021891	630 (aa)	-	-
ENSFDAT00000010605	TRMT1-202	2169	XM_010613393	ENSFDAP00000021888	659 (aa)	XP_010611695	UPI00053FF2B6

Gene Model

Click here to download ENSFDAG00000007386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000007386	TRMT1	96	86.207	ENSG00000104907	TRMT1	100	93.194	Homo_sapiens
ENSFDAG00000007386	TRMT1	99	82.628	ENSAMEG00000012598	TRMT1	99	82.628	Ailuropoda_melanoleuca
ENSFDAG00000007386	TRMT1	90	57.667	ENSACIG00000018680	trmt1	92	57.667	Amphilophus_citrinellus
ENSFDAG00000007386	TRMT1	88	65.017	ENSAOCG00000006781	trmt1	87	65.017	Amphiprion_ocellaris
ENSFDAG00000007386	TRMT1	88	65.077	ENSAPEG00000007712	trmt1	87	65.077	Amphiprion_percula
ENSFDAG00000007386	TRMT1	87	67.776	ENSATEG00000001872	trmt1	84	67.776	Anabas_testudineus
ENSFDAG00000007386	TRMT1	93	64.007	ENSACAG00000003825	TRMT1	97	64.007	Anolis_carolinensis
ENSFDAG00000007386	TRMT1	98	80.515	ENSANAG00000023016	TRMT1	98	82.736	Aotus_nancymaae
ENSFDAG00000007386	TRMT1	87	63.811	ENSACLG00000010073	trmt1	92	63.811	Astatotilapia_calliptera
ENSFDAG00000007386	TRMT1	87	67.188	ENSAMXG00000012026	trmt1	85	67.188	Astyanax_mexicanus
ENSFDAG00000007386	TRMT1	99	83.030	ENSBTAG00000019325	TRMT1	94	83.030	Bos_taurus
ENSFDAG00000007386	TRMT1	81	40.219	WBGene00006613	trm-1	97	40.219	Caenorhabditis_elegans
ENSFDAG00000007386	TRMT1	97	81.169	ENSCJAG00000004566	TRMT1	99	81.169	Callithrix_jacchus
ENSFDAG00000007386	TRMT1	99	83.686	ENSCAFG00000017070	TRMT1	99	84.301	Canis_familiaris
ENSFDAG00000007386	TRMT1	99	83.886	ENSCAFG00020005397	TRMT1	99	83.886	Canis_lupus_dingo
ENSFDAG00000007386	TRMT1	99	82.353	ENSCHIG00000013569	TRMT1	99	82.353	Capra_hircus
ENSFDAG00000007386	TRMT1	97	80.249	ENSTSYG00000003207	TRMT1	99	79.756	Carlito_syrichta
ENSFDAG00000007386	TRMT1	83	83.142	ENSCAPG00000003355	TRMT1	97	83.142	Cavia_aperea
ENSFDAG00000007386	TRMT1	97	85.404	ENSCPOG00000011754	TRMT1	97	85.404	Cavia_porcellus
ENSFDAG00000007386	TRMT1	97	80.687	ENSCCAG00000022263	TRMT1	98	82.353	Cebus_capucinus
ENSFDAG00000007386	TRMT1	99	84.115	ENSCATG00000039850	TRMT1	99	84.115	Cercocebus_atys
ENSFDAG00000007386	TRMT1	84	72.292	ENSCATG00000038220	-	98	72.292	Cercocebus_atys
ENSFDAG00000007386	TRMT1	97	90.358	ENSCLAG00000015295	TRMT1	95	90.358	Chinchilla_lanigera
ENSFDAG00000007386	TRMT1	80	87.170	ENSCSAG00000006500	TRMT1	100	87.170	Chlorocebus_sabaeus
ENSFDAG00000007386	TRMT1	95	65.055	ENSCPBG00000023866	TRMT1	94	65.062	Chrysemys_picta_bellii
ENSFDAG00000007386	TRMT1	82	45.971	ENSCING00000002884	-	96	45.971	Ciona_intestinalis
ENSFDAG00000007386	TRMT1	82	45.173	ENSCSAVG00000010927	-	99	45.438	Ciona_savignyi
ENSFDAG00000007386	TRMT1	98	67.841	ENSCANG00000040631	TRMT1	99	67.841	Colobus_angolensis_palliatus
ENSFDAG00000007386	TRMT1	90	67.279	ENSCANG00000031650	-	95	66.504	Colobus_angolensis_palliatus
ENSFDAG00000007386	TRMT1	100	79.430	ENSCGRG00001022594	Trmt1	99	79.430	Cricetulus_griseus_chok1gshd
ENSFDAG00000007386	TRMT1	100	79.430	ENSCGRG00000017732	Trmt1	99	79.430	Cricetulus_griseus_crigri
ENSFDAG00000007386	TRMT1	86	65.149	ENSCSEG00000001643	trmt1	84	68.031	Cynoglossus_semilaevis
ENSFDAG00000007386	TRMT1	87	67.133	ENSCVAG00000011886	trmt1	86	67.133	Cyprinodon_variegatus
ENSFDAG00000007386	TRMT1	87	64.888	ENSDARG00000010978	trmt1	85	64.888	Danio_rerio
ENSFDAG00000007386	TRMT1	84	57.576	ENSDNOG00000048240	-	95	57.576	Dasypus_novemcinctus
ENSFDAG00000007386	TRMT1	99	79.604	ENSDORG00000014298	Trmt1	99	79.604	Dipodomys_ordii
ENSFDAG00000007386	TRMT1	78	46.911	FBgn0032430	CG6388	87	46.911	Drosophila_melanogaster
ENSFDAG00000007386	TRMT1	56	79.720	ENSETEG00000015483	-	54	79.720	Echinops_telfairi
ENSFDAG00000007386	TRMT1	78	52.907	ENSEBUG00000003449	trmt1	76	53.000	Eptatretus_burgeri
ENSFDAG00000007386	TRMT1	94	83.949	ENSEASG00005004050	TRMT1	99	83.203	Equus_asinus_asinus
ENSFDAG00000007386	TRMT1	94	83.949	ENSECAG00000016149	TRMT1	99	83.203	Equus_caballus
ENSFDAG00000007386	TRMT1	60	70.529	ENSEEUG00000014102	-	100	70.529	Erinaceus_europaeus
ENSFDAG00000007386	TRMT1	92	62.276	ENSELUG00000021659	trmt1	90	62.276	Esox_lucius
ENSFDAG00000007386	TRMT1	99	83.359	ENSFCAG00000000483	TRMT1	99	83.359	Felis_catus
ENSFDAG00000007386	TRMT1	81	69.274	ENSFHEG00000012865	trmt1	89	69.274	Fundulus_heteroclitus
ENSFDAG00000007386	TRMT1	87	60.070	ENSGMOG00000006564	trmt1	98	60.558	Gadus_morhua
ENSFDAG00000007386	TRMT1	88	66.838	ENSGAFG00000011862	trmt1	90	67.010	Gambusia_affinis
ENSFDAG00000007386	TRMT1	88	62.628	ENSGACG00000000227	trmt1	94	62.628	Gasterosteus_aculeatus
ENSFDAG00000007386	TRMT1	95	64.396	ENSGAGG00000016432	TRMT1	94	64.396	Gopherus_agassizii
ENSFDAG00000007386	TRMT1	96	86.207	ENSGGOG00000014007	TRMT1	99	84.960	Gorilla_gorilla
ENSFDAG00000007386	TRMT1	87	57.465	ENSHBUG00000008821	trmt1	94	57.465	Haplochromis_burtoni
ENSFDAG00000007386	TRMT1	100	91.212	ENSHGLG00000015972	TRMT1	99	91.212	Heterocephalus_glaber_female
ENSFDAG00000007386	TRMT1	100	85.103	ENSHGLG00100018112	TRMT1	99	85.103	Heterocephalus_glaber_male
ENSFDAG00000007386	TRMT1	87	63.748	ENSHCOG00000009447	trmt1	88	63.748	Hippocampus_comes
ENSFDAG00000007386	TRMT1	88	64.597	ENSIPUG00000002899	trmt1	86	64.983	Ictalurus_punctatus
ENSFDAG00000007386	TRMT1	99	83.837	ENSSTOG00000012531	TRMT1	99	83.837	Ictidomys_tridecemlineatus
ENSFDAG00000007386	TRMT1	95	81.333	ENSJJAG00000017154	Trmt1	99	78.989	Jaculus_jaculus
ENSFDAG00000007386	TRMT1	89	66.723	ENSKMAG00000011809	trmt1	97	65.470	Kryptolebias_marmoratus
ENSFDAG00000007386	TRMT1	87	65.849	ENSLBEG00000012703	trmt1	84	65.849	Labrus_bergylta
ENSFDAG00000007386	TRMT1	86	57.366	ENSLACG00000014585	TRMT1	98	55.556	Latimeria_chalumnae
ENSFDAG00000007386	TRMT1	86	63.040	ENSLOCG00000006479	trmt1	97	63.558	Lepisosteus_oculatus
ENSFDAG00000007386	TRMT1	97	84.006	ENSLAFG00000014072	TRMT1	99	84.006	Loxodonta_africana
ENSFDAG00000007386	TRMT1	99	84.115	ENSMFAG00000033143	TRMT1	99	84.115	Macaca_fascicularis
ENSFDAG00000007386	TRMT1	99	81.250	ENSMMUG00000001167	TRMT1	99	81.250	Macaca_mulatta
ENSFDAG00000007386	TRMT1	99	84.115	ENSMNEG00000037867	TRMT1	99	84.115	Macaca_nemestrina
ENSFDAG00000007386	TRMT1	99	84.160	ENSMLEG00000016142	TRMT1	99	84.160	Mandrillus_leucophaeus
ENSFDAG00000007386	TRMT1	89	65.705	ENSMAMG00000004357	trmt1	88	65.705	Mastacembelus_armatus
ENSFDAG00000007386	TRMT1	87	64.336	ENSMZEG00005014510	trmt1	85	64.336	Maylandia_zebra
ENSFDAG00000007386	TRMT1	98	79.454	ENSMAUG00000011134	Trmt1	99	78.527	Mesocricetus_auratus
ENSFDAG00000007386	TRMT1	99	84.290	ENSMICG00000000793	TRMT1	99	84.290	Microcebus_murinus
ENSFDAG00000007386	TRMT1	97	80.341	ENSMOCG00000015895	Trmt1	99	78.861	Microtus_ochrogaster
ENSFDAG00000007386	TRMT1	90	62.876	ENSMMOG00000011097	trmt1	96	62.876	Mola_mola
ENSFDAG00000007386	TRMT1	93	72.625	ENSMODG00000011619	TRMT1	99	72.625	Monodelphis_domestica
ENSFDAG00000007386	TRMT1	97	80.389	MGP_CAROLIEiJ_G0031304	Trmt1	100	79.087	Mus_caroli
ENSFDAG00000007386	TRMT1	99	78.561	ENSMUSG00000001909	Trmt1	100	79.087	Mus_musculus
ENSFDAG00000007386	TRMT1	99	78.261	MGP_SPRETEiJ_G0032422	Trmt1	100	78.707	Mus_spretus
ENSFDAG00000007386	TRMT1	99	82.779	ENSMPUG00000004210	TRMT1	95	82.779	Mustela_putorius_furo
ENSFDAG00000007386	TRMT1	99	82.628	ENSMLUG00000012809	TRMT1	99	82.628	Myotis_lucifugus
ENSFDAG00000007386	TRMT1	98	79.032	ENSNGAG00000022486	Trmt1	97	79.032	Nannospalax_galili
ENSFDAG00000007386	TRMT1	75	68.155	ENSNBRG00000024376	trmt1	85	68.155	Neolamprologus_brichardi
ENSFDAG00000007386	TRMT1	81	85.672	ENSNLEG00000013019	-	99	85.672	Nomascus_leucogenys
ENSFDAG00000007386	TRMT1	87	75.521	ENSMEUG00000013756	TRMT1	97	75.521	Notamacropus_eugenii
ENSFDAG00000007386	TRMT1	79	84.543	ENSOPRG00000009471	-	79	84.543	Ochotona_princeps
ENSFDAG00000007386	TRMT1	98	88.390	ENSODEG00000010323	TRMT1	98	88.390	Octodon_degus
ENSFDAG00000007386	TRMT1	94	63.768	ENSONIG00000000400	trmt1	99	63.768	Oreochromis_niloticus
ENSFDAG00000007386	TRMT1	79	86.095	ENSOCUG00000021934	TRMT1	99	86.095	Oryctolagus_cuniculus
ENSFDAG00000007386	TRMT1	87	61.672	ENSORLG00000020074	trmt1	90	61.340	Oryzias_latipes
ENSFDAG00000007386	TRMT1	87	65.035	ENSORLG00020007561	trmt1	89	64.860	Oryzias_latipes_hni
ENSFDAG00000007386	TRMT1	89	63.744	ENSORLG00015006547	trmt1	89	63.744	Oryzias_latipes_hsok
ENSFDAG00000007386	TRMT1	93	62.237	ENSOMEG00000019343	trmt1	93	62.237	Oryzias_melastigma
ENSFDAG00000007386	TRMT1	94	82.986	ENSOGAG00000025576	TRMT1	97	82.986	Otolemur_garnettii
ENSFDAG00000007386	TRMT1	99	69.545	ENSOARG00000009397	TRMT1	94	68.923	Ovis_aries
ENSFDAG00000007386	TRMT1	98	74.615	ENSPPRG00000012117	TRMT1	99	74.654	Panthera_pardus
ENSFDAG00000007386	TRMT1	80	85.801	ENSPTIG00000008833	TRMT1	97	86.018	Panthera_tigris_altaica
ENSFDAG00000007386	TRMT1	97	62.791	ENSPTRG00000050421	-	98	62.791	Pan_troglodytes
ENSFDAG00000007386	TRMT1	96	86.207	ENSPTRG00000010557	TRMT1	99	84.960	Pan_troglodytes
ENSFDAG00000007386	TRMT1	99	84.530	ENSPANG00000009247	TRMT1	99	84.530	Papio_anubis
ENSFDAG00000007386	TRMT1	84	71.992	ENSPANG00000034058	-	96	71.992	Papio_anubis
ENSFDAG00000007386	TRMT1	87	67.308	ENSPKIG00000005309	trmt1	84	67.308	Paramormyrops_kingsleyae
ENSFDAG00000007386	TRMT1	88	57.290	ENSPSIG00000008762	TRMT1	83	57.290	Pelodiscus_sinensis
ENSFDAG00000007386	TRMT1	91	63.439	ENSPMGG00000019764	trmt1	94	63.439	Periophthalmus_magnuspinnatus
ENSFDAG00000007386	TRMT1	97	82.820	ENSPEMG00000016247	Trmt1	99	81.191	Peromyscus_maniculatus_bairdii
ENSFDAG00000007386	TRMT1	88	59.863	ENSPMAG00000004329	trmt1	91	59.863	Petromyzon_marinus
ENSFDAG00000007386	TRMT1	98	70.197	ENSPCIG00000019273	TRMT1	99	70.197	Phascolarctos_cinereus
ENSFDAG00000007386	TRMT1	88	67.698	ENSPFOG00000008527	trmt1	89	67.698	Poecilia_formosa
ENSFDAG00000007386	TRMT1	88	67.698	ENSPLAG00000018788	trmt1	89	70.778	Poecilia_latipinna
ENSFDAG00000007386	TRMT1	88	67.526	ENSPMEG00000013120	trmt1	89	67.526	Poecilia_mexicana
ENSFDAG00000007386	TRMT1	89	65.825	ENSPREG00000000211	trmt1	88	65.993	Poecilia_reticulata
ENSFDAG00000007386	TRMT1	96	85.423	ENSPPYG00000009622	TRMT1	99	84.251	Pongo_abelii
ENSFDAG00000007386	TRMT1	98	76.543	ENSPCAG00000003698	TRMT1	99	76.543	Procavia_capensis
ENSFDAG00000007386	TRMT1	99	84.640	ENSPCOG00000008653	TRMT1	99	84.640	Propithecus_coquereli
ENSFDAG00000007386	TRMT1	99	83.817	ENSPVAG00000015076	TRMT1	99	83.817	Pteropus_vampyrus
ENSFDAG00000007386	TRMT1	87	63.112	ENSPNYG00000013960	trmt1	92	63.112	Pundamilia_nyererei
ENSFDAG00000007386	TRMT1	80	68.333	ENSPNAG00000024859	trmt1	88	68.333	Pygocentrus_nattereri
ENSFDAG00000007386	TRMT1	96	79.907	ENSRNOG00000002914	Trmt1	99	79.907	Rattus_norvegicus
ENSFDAG00000007386	TRMT1	94	66.455	ENSRBIG00000037505	-	98	65.938	Rhinopithecus_bieti
ENSFDAG00000007386	TRMT1	99	83.661	ENSRBIG00000038324	TRMT1	99	83.661	Rhinopithecus_bieti
ENSFDAG00000007386	TRMT1	94	65.819	ENSRROG00000031847	-	97	65.312	Rhinopithecus_roxellana
ENSFDAG00000007386	TRMT1	99	83.812	ENSRROG00000028599	TRMT1	99	83.812	Rhinopithecus_roxellana
ENSFDAG00000007386	TRMT1	77	37.244	YDR120C	-	92	37.244	Saccharomyces_cerevisiae
ENSFDAG00000007386	TRMT1	96	81.384	ENSSBOG00000028861	TRMT1	98	82.680	Saimiri_boliviensis_boliviensis
ENSFDAG00000007386	TRMT1	86	76.357	ENSSHAG00000014381	TRMT1	98	73.432	Sarcophilus_harrisii
ENSFDAG00000007386	TRMT1	87	66.900	ENSSFOG00015004139	trmt1	84	66.900	Scleropages_formosus
ENSFDAG00000007386	TRMT1	87	67.478	ENSSMAG00000021136	trmt1	85	67.478	Scophthalmus_maximus
ENSFDAG00000007386	TRMT1	89	65.593	ENSSDUG00000012740	trmt1	87	65.593	Seriola_dumerili
ENSFDAG00000007386	TRMT1	89	64.915	ENSSLDG00000005971	trmt1	87	64.915	Seriola_lalandi_dorsalis
ENSFDAG00000007386	TRMT1	85	81.560	ENSSARG00000005138	TRMT1	99	81.560	Sorex_araneus
ENSFDAG00000007386	TRMT1	88	53.584	ENSSPUG00000001084	TRMT1	91	54.266	Sphenodon_punctatus
ENSFDAG00000007386	TRMT1	90	63.043	ENSSPAG00000007153	trmt1	98	62.919	Stegastes_partitus
ENSFDAG00000007386	TRMT1	96	84.882	ENSSSCG00000013744	TRMT1	99	84.882	Sus_scrofa
ENSFDAG00000007386	TRMT1	87	60.368	ENSTRUG00000010700	trmt1	89	60.535	Takifugu_rubripes
ENSFDAG00000007386	TRMT1	87	64.860	ENSTNIG00000018808	trmt1	98	64.860	Tetraodon_nigroviridis
ENSFDAG00000007386	TRMT1	97	81.522	ENSTTRG00000006379	TRMT1	99	81.317	Tursiops_truncatus
ENSFDAG00000007386	TRMT1	98	82.488	ENSUAMG00000022911	TRMT1	99	82.488	Ursus_americanus
ENSFDAG00000007386	TRMT1	96	82.418	ENSUMAG00000006027	TRMT1	99	82.418	Ursus_maritimus
ENSFDAG00000007386	TRMT1	99	83.384	ENSVVUG00000024177	TRMT1	99	83.384	Vulpes_vulpes
ENSFDAG00000007386	TRMT1	73	69.439	ENSXETG00000033863	TRMT1	95	69.439	Xenopus_tropicalis
ENSFDAG00000007386	TRMT1	93	64.194	ENSXCOG00000015733	trmt1	94	64.355	Xiphophorus_couchianus
ENSFDAG00000007386	TRMT1	86	67.075	ENSXMAG00000013823	trmt1	97	67.426	Xiphophorus_maculatus