EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000007388 (Gene tree)
Gene ID: 104876203
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 558195 bases
Position: chrKN123497.1:3328846-3887040
Accession: 104876203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000021876	Fox-1_C	PF12414.8	9.8e-43	1	1
ENSFDAP00000021877	Fox-1_C	PF12414.8	1.1e-40	1	1
ENSFDAP00000021877	RRM_1	PF00076.22	2.5e-18	1	1
ENSFDAP00000021876	RRM_1	PF00076.22	2.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000027742	RBFOX1-202	1257	XM_010644150	ENSFDAP00000021877	418 (aa)	XP_010642452	UPI0008FF74A3
ENSFDAT00000010616	RBFOX1-201	1194	-	ENSFDAP00000021876	397 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000007388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000007388	RBFOX1	76	50.938	ENSFDAG00000006204	RBFOX2	87	51.682
ENSFDAG00000007388	RBFOX1	91	54.567	ENSFDAG00000007489	RBFOX3	100	57.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000007388	RBFOX1	100	98.741	ENSG00000078328	RBFOX1	100	98.859	Homo_sapiens
ENSFDAG00000007388	RBFOX1	100	75.904	ENSAPOG00000003197	rbfox1	100	76.386	Acanthochromis_polyacanthus
ENSFDAG00000007388	RBFOX1	60	95.200	ENSAMEG00000008605	RBFOX1	100	95.200	Ailuropoda_melanoleuca
ENSFDAG00000007388	RBFOX1	67	64.527	ENSACIG00000005478	rbfox1	68	64.983	Amphilophus_citrinellus
ENSFDAG00000007388	RBFOX1	73	70.684	ENSAOCG00000008283	rbfox1	96	70.684	Amphiprion_ocellaris
ENSFDAG00000007388	RBFOX1	95	71.429	ENSAPEG00000010636	rbfox1	100	71.316	Amphiprion_percula
ENSFDAG00000007388	RBFOX1	73	69.256	ENSATEG00000007513	rbfox1	97	68.810	Anabas_testudineus
ENSFDAG00000007388	RBFOX1	98	94.344	ENSAPLG00000013263	RBFOX1	97	94.344	Anas_platyrhynchos
ENSFDAG00000007388	RBFOX1	99	86.466	ENSACAG00000004013	RBFOX1	100	86.466	Anolis_carolinensis
ENSFDAG00000007388	RBFOX1	99	95.685	ENSANAG00000029527	RBFOX1	98	98.718	Aotus_nancymaae
ENSFDAG00000007388	RBFOX1	56	87.444	ENSAMXG00000002431	rbfox1	72	79.447	Astyanax_mexicanus
ENSFDAG00000007388	RBFOX1	99	95.685	ENSBTAG00000007210	RBFOX1	98	98.718	Bos_taurus
ENSFDAG00000007388	RBFOX1	100	97.847	ENSCJAG00000017351	RBFOX1	100	97.847	Callithrix_jacchus
ENSFDAG00000007388	RBFOX1	100	98.086	ENSCAFG00000019082	RBFOX1	100	98.086	Canis_familiaris
ENSFDAG00000007388	RBFOX1	71	97.973	ENSCAFG00020024881	RBFOX1	83	97.973	Canis_lupus_dingo
ENSFDAG00000007388	RBFOX1	99	95.685	ENSCHIG00000023549	RBFOX1	98	98.718	Capra_hircus
ENSFDAG00000007388	RBFOX1	98	96.401	ENSTSYG00000005334	RBFOX1	100	98.458	Carlito_syrichta
ENSFDAG00000007388	RBFOX1	100	99.522	ENSCAPG00000017669	RBFOX1	100	99.522	Cavia_aperea
ENSFDAG00000007388	RBFOX1	100	99.522	ENSCPOG00000011314	RBFOX1	100	99.522	Cavia_porcellus
ENSFDAG00000007388	RBFOX1	100	97.847	ENSCCAG00000023031	RBFOX1	100	97.847	Cebus_capucinus
ENSFDAG00000007388	RBFOX1	100	97.847	ENSCATG00000033816	RBFOX1	100	97.847	Cercocebus_atys
ENSFDAG00000007388	RBFOX1	100	99.522	ENSCLAG00000012761	RBFOX1	100	99.522	Chinchilla_lanigera
ENSFDAG00000007388	RBFOX1	84	95.821	ENSCSAG00000008739	RBFOX1	89	95.821	Chlorocebus_sabaeus
ENSFDAG00000007388	RBFOX1	100	76.316	ENSCHOG00000012843	RBFOX1	100	76.316	Choloepus_hoffmanni
ENSFDAG00000007388	RBFOX1	98	94.588	ENSCPBG00000026626	RBFOX1	98	94.359	Chrysemys_picta_bellii
ENSFDAG00000007388	RBFOX1	100	97.847	ENSCANG00000033125	RBFOX1	100	97.847	Colobus_angolensis_palliatus
ENSFDAG00000007388	RBFOX1	100	97.733	ENSCGRG00001013729	Rbfox1	100	97.733	Cricetulus_griseus_chok1gshd
ENSFDAG00000007388	RBFOX1	100	97.733	ENSCGRG00000003272	Rbfox1	100	97.733	Cricetulus_griseus_crigri
ENSFDAG00000007388	RBFOX1	95	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSFDAG00000007388	RBFOX1	100	80.653	ENSDARG00000014746	rbfox1	100	86.829	Danio_rerio
ENSFDAG00000007388	RBFOX1	98	98.462	ENSDNOG00000043612	RBFOX1	94	98.462	Dasypus_novemcinctus
ENSFDAG00000007388	RBFOX1	100	93.812	ENSDORG00000010024	Rbfox1	100	93.812	Dipodomys_ordii
ENSFDAG00000007388	RBFOX1	100	78.230	ENSETEG00000003771	RBFOX1	100	78.230	Echinops_telfairi
ENSFDAG00000007388	RBFOX1	98	99.229	ENSEASG00005011599	RBFOX1	98	99.487	Equus_asinus_asinus
ENSFDAG00000007388	RBFOX1	97	98.765	ENSECAG00000012667	RBFOX1	98	98.765	Equus_caballus
ENSFDAG00000007388	RBFOX1	84	65.560	ENSELUG00000013096	rbfox1	99	64.894	Esox_lucius
ENSFDAG00000007388	RBFOX1	98	98.458	ENSFCAG00000025322	RBFOX1	96	91.627	Felis_catus
ENSFDAG00000007388	RBFOX1	83	92.192	ENSFALG00000004027	RBFOX1	100	92.192	Ficedula_albicollis
ENSFDAG00000007388	RBFOX1	100	92.584	ENSGALG00000034325	RBFOX1	100	92.584	Gallus_gallus
ENSFDAG00000007388	RBFOX1	100	91.866	ENSGAGG00000023681	RBFOX1	100	94.695	Gopherus_agassizii
ENSFDAG00000007388	RBFOX1	100	97.847	ENSGGOG00000016871	-	100	97.847	Gorilla_gorilla
ENSFDAG00000007388	RBFOX1	100	99.761	ENSHGLG00000016944	RBFOX1	100	99.761	Heterocephalus_glaber_female
ENSFDAG00000007388	RBFOX1	100	99.761	ENSHGLG00100003272	RBFOX1	100	99.761	Heterocephalus_glaber_male
ENSFDAG00000007388	RBFOX1	85	70.605	ENSHCOG00000016419	rbfox1	91	70.690	Hippocampus_comes
ENSFDAG00000007388	RBFOX1	95	83.289	ENSIPUG00000015215	rbfox1	100	83.289	Ictalurus_punctatus
ENSFDAG00000007388	RBFOX1	100	98.237	ENSSTOG00000000322	RBFOX1	100	98.237	Ictidomys_tridecemlineatus
ENSFDAG00000007388	RBFOX1	100	94.458	ENSJJAG00000002575	Rbfox1	100	94.458	Jaculus_jaculus
ENSFDAG00000007388	RBFOX1	99	73.201	ENSLBEG00000014659	rbfox1	99	72.953	Labrus_bergylta
ENSFDAG00000007388	RBFOX1	98	86.514	ENSLOCG00000006675	rbfox1	99	86.514	Lepisosteus_oculatus
ENSFDAG00000007388	RBFOX1	77	98.701	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSFDAG00000007388	RBFOX1	100	97.608	ENSMFAG00000036447	RBFOX1	100	97.608	Macaca_fascicularis
ENSFDAG00000007388	RBFOX1	100	97.608	ENSMMUG00000003458	RBFOX1	100	97.608	Macaca_mulatta
ENSFDAG00000007388	RBFOX1	100	97.608	ENSMNEG00000032034	RBFOX1	100	97.608	Macaca_nemestrina
ENSFDAG00000007388	RBFOX1	100	97.847	ENSMLEG00000015382	RBFOX1	100	97.847	Mandrillus_leucophaeus
ENSFDAG00000007388	RBFOX1	95	75.000	ENSMAMG00000003142	rbfox1	100	75.510	Mastacembelus_armatus
ENSFDAG00000007388	RBFOX1	71	88.612	ENSMGAG00000008606	RBFOX1	96	87.857	Meleagris_gallopavo
ENSFDAG00000007388	RBFOX1	99	57.071	ENSMAUG00000020570	Rbfox1	99	56.061	Mesocricetus_auratus
ENSFDAG00000007388	RBFOX1	98	91.026	ENSMICG00000034286	RBFOX1	100	89.330	Microcebus_murinus
ENSFDAG00000007388	RBFOX1	100	97.733	ENSMOCG00000020932	Rbfox1	100	97.733	Microtus_ochrogaster
ENSFDAG00000007388	RBFOX1	86	71.014	ENSMMOG00000009716	rbfox1	86	71.386	Mola_mola
ENSFDAG00000007388	RBFOX1	80	94.984	ENSMODG00000005826	RBFOX1	90	94.984	Monodelphis_domestica
ENSFDAG00000007388	RBFOX1	100	75.795	ENSMALG00000003337	rbfox1	100	75.795	Monopterus_albus
ENSFDAG00000007388	RBFOX1	100	97.985	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.985	Mus_caroli
ENSFDAG00000007388	RBFOX1	100	97.733	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSFDAG00000007388	RBFOX1	100	97.985	MGP_PahariEiJ_G0016135	Rbfox1	100	97.985	Mus_pahari
ENSFDAG00000007388	RBFOX1	100	97.481	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.481	Mus_spretus
ENSFDAG00000007388	RBFOX1	84	96.386	ENSMPUG00000014822	RBFOX1	91	93.889	Mustela_putorius_furo
ENSFDAG00000007388	RBFOX1	77	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSFDAG00000007388	RBFOX1	100	97.847	ENSNGAG00000023276	Rbfox1	100	98.454	Nannospalax_galili
ENSFDAG00000007388	RBFOX1	98	60.482	ENSNBRG00000011084	rbfox1	94	61.017	Neolamprologus_brichardi
ENSFDAG00000007388	RBFOX1	100	97.608	ENSNLEG00000010017	-	100	97.608	Nomascus_leucogenys
ENSFDAG00000007388	RBFOX1	100	80.144	ENSMEUG00000012525	RBFOX1	100	80.144	Notamacropus_eugenii
ENSFDAG00000007388	RBFOX1	100	79.665	ENSOPRG00000006199	-	100	79.665	Ochotona_princeps
ENSFDAG00000007388	RBFOX1	100	98.804	ENSODEG00000013166	RBFOX1	100	98.804	Octodon_degus
ENSFDAG00000007388	RBFOX1	84	93.433	ENSOANG00000002379	RBFOX1	89	93.433	Ornithorhynchus_anatinus
ENSFDAG00000007388	RBFOX1	57	95.111	ENSOCUG00000001205	-	100	95.111	Oryctolagus_cuniculus
ENSFDAG00000007388	RBFOX1	100	96.977	ENSOGAG00000025535	RBFOX1	100	96.977	Otolemur_garnettii
ENSFDAG00000007388	RBFOX1	63	86.000	ENSOARG00000005135	RBFOX1	100	85.259	Ovis_aries
ENSFDAG00000007388	RBFOX1	98	98.711	ENSPPAG00000036238	-	100	98.711	Pan_paniscus
ENSFDAG00000007388	RBFOX1	100	97.847	ENSPPRG00000006546	RBFOX1	100	97.847	Panthera_pardus
ENSFDAG00000007388	RBFOX1	100	86.398	ENSPTIG00000021154	RBFOX1	99	86.856	Panthera_tigris_altaica
ENSFDAG00000007388	RBFOX1	100	97.847	ENSPTRG00000007744	RBFOX1	100	97.847	Pan_troglodytes
ENSFDAG00000007388	RBFOX1	100	97.847	ENSPANG00000026500	RBFOX1	100	97.847	Papio_anubis
ENSFDAG00000007388	RBFOX1	74	83.219	ENSPKIG00000019353	rbfox1	86	83.219	Paramormyrops_kingsleyae
ENSFDAG00000007388	RBFOX1	100	81.704	ENSPKIG00000009667	-	95	83.152	Paramormyrops_kingsleyae
ENSFDAG00000007388	RBFOX1	99	93.639	ENSPSIG00000006523	RBFOX1	98	93.639	Pelodiscus_sinensis
ENSFDAG00000007388	RBFOX1	100	97.985	ENSPEMG00000017607	Rbfox1	100	97.985	Peromyscus_maniculatus_bairdii
ENSFDAG00000007388	RBFOX1	73	92.414	ENSPCIG00000026887	RBFOX1	100	92.414	Phascolarctos_cinereus
ENSFDAG00000007388	RBFOX1	84	96.386	ENSPPYG00000007079	-	91	93.889	Pongo_abelii
ENSFDAG00000007388	RBFOX1	90	88.624	ENSPCAG00000002630	RBFOX1	100	88.624	Procavia_capensis
ENSFDAG00000007388	RBFOX1	100	97.847	ENSPCOG00000025687	RBFOX1	100	97.847	Propithecus_coquereli
ENSFDAG00000007388	RBFOX1	100	94.258	ENSPVAG00000013467	RBFOX1	100	94.258	Pteropus_vampyrus
ENSFDAG00000007388	RBFOX1	95	80.808	ENSPNAG00000023109	rbfox1	100	80.808	Pygocentrus_nattereri
ENSFDAG00000007388	RBFOX1	100	95.215	ENSRNOG00000002827	Rbfox1	100	95.215	Rattus_norvegicus
ENSFDAG00000007388	RBFOX1	98	98.711	ENSRBIG00000044478	RBFOX1	100	98.711	Rhinopithecus_bieti
ENSFDAG00000007388	RBFOX1	100	97.847	ENSRROG00000044411	RBFOX1	100	97.847	Rhinopithecus_roxellana
ENSFDAG00000007388	RBFOX1	99	97.710	ENSSBOG00000033726	RBFOX1	98	97.710	Saimiri_boliviensis_boliviensis
ENSFDAG00000007388	RBFOX1	100	92.191	ENSSHAG00000009257	RBFOX1	100	92.191	Sarcophilus_harrisii
ENSFDAG00000007388	RBFOX1	98	68.448	ENSSFOG00015023675	rbfox1	93	87.826	Scleropages_formosus
ENSFDAG00000007388	RBFOX1	88	70.391	ENSSFOG00015009955	-	87	68.449	Scleropages_formosus
ENSFDAG00000007388	RBFOX1	98	76.847	ENSSMAG00000015505	rbfox1	96	73.223	Scophthalmus_maximus
ENSFDAG00000007388	RBFOX1	98	74.490	ENSSDUG00000016413	rbfox1	99	74.235	Seriola_dumerili
ENSFDAG00000007388	RBFOX1	85	72.353	ENSSLDG00000009353	rbfox1	97	72.024	Seriola_lalandi_dorsalis
ENSFDAG00000007388	RBFOX1	85	82.353	ENSSPUG00000009732	RBFOX1	87	82.405	Sphenodon_punctatus
ENSFDAG00000007388	RBFOX1	98	76.108	ENSSPAG00000009723	rbfox1	100	75.862	Stegastes_partitus
ENSFDAG00000007388	RBFOX1	97	97.778	ENSSSCG00000007917	RBFOX1	98	97.778	Sus_scrofa
ENSFDAG00000007388	RBFOX1	98	94.344	ENSTGUG00000004562	RBFOX1	100	94.344	Taeniopygia_guttata
ENSFDAG00000007388	RBFOX1	98	75.616	ENSTRUG00000020940	rbfox1	99	75.616	Takifugu_rubripes
ENSFDAG00000007388	RBFOX1	67	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSFDAG00000007388	RBFOX1	81	82.759	ENSTBEG00000009169	-	81	82.759	Tupaia_belangeri
ENSFDAG00000007388	RBFOX1	100	97.847	ENSTTRG00000005700	RBFOX1	100	97.847	Tursiops_truncatus
ENSFDAG00000007388	RBFOX1	100	92.191	ENSUAMG00000024633	RBFOX1	100	92.191	Ursus_americanus
ENSFDAG00000007388	RBFOX1	100	83.627	ENSUMAG00000003579	RBFOX1	100	83.627	Ursus_maritimus
ENSFDAG00000007388	RBFOX1	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSFDAG00000007388	RBFOX1	98	98.458	ENSVVUG00000017311	RBFOX1	96	91.627	Vulpes_vulpes