EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000007440 (Gene tree)
Gene ID: 104874009
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 9289 bases
Position: chrKN123237.1:2542-11830
Accession: 104874009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000021814	RRM_1	PF00076.22	4.9e-18	1	1
ENSFDAP00000021810	RRM_1	PF00076.22	5.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000027753	RBM42-202	1607	XM_010640957	ENSFDAP00000021814	451 (aa)	XP_010639259	-
ENSFDAT00000010671	RBM42-201	1694	XM_010640956	ENSFDAP00000021810	480 (aa)	XP_010639258	-

Gene Model

Click here to download ENSFDAG00000007440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000007440	RBM42	99	96.468	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSFDAG00000007440	RBM42	99	95.842	ENSAMEG00000000524	RBM42	100	95.842	Ailuropoda_melanoleuca
ENSFDAG00000007440	RBM42	99	95.825	ENSANAG00000027537	RBM42	100	95.825	Aotus_nancymaae
ENSFDAG00000007440	RBM42	99	95.405	ENSBTAG00000013440	RBM42	100	95.405	Bos_taurus
ENSFDAG00000007440	RBM42	99	96.889	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSFDAG00000007440	RBM42	100	87.665	ENSCAFG00020018628	RBM42	90	100.000	Canis_lupus_dingo
ENSFDAG00000007440	RBM42	99	96.444	ENSCHIG00000009518	RBM42	100	96.444	Capra_hircus
ENSFDAG00000007440	RBM42	99	96.033	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSFDAG00000007440	RBM42	81	98.196	ENSCAPG00000009566	RBM42	99	98.196	Cavia_aperea
ENSFDAG00000007440	RBM42	100	97.577	ENSCPOG00000012365	RBM42	100	97.577	Cavia_porcellus
ENSFDAG00000007440	RBM42	99	96.451	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSFDAG00000007440	RBM42	99	96.247	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSFDAG00000007440	RBM42	100	97.577	ENSCLAG00000012865	RBM42	100	97.577	Chinchilla_lanigera
ENSFDAG00000007440	RBM42	99	96.247	ENSCSAG00000004422	RBM42	100	96.247	Chlorocebus_sabaeus
ENSFDAG00000007440	RBM42	99	85.714	ENSCANG00000030272	RBM42	100	83.193	Colobus_angolensis_palliatus
ENSFDAG00000007440	RBM42	100	94.678	ENSCGRG00001018540	Rbm42	97	94.218	Cricetulus_griseus_chok1gshd
ENSFDAG00000007440	RBM42	99	96.452	ENSDNOG00000037397	RBM42	100	96.452	Dasypus_novemcinctus
ENSFDAG00000007440	RBM42	100	96.674	ENSDORG00000013001	Rbm42	100	96.674	Dipodomys_ordii
ENSFDAG00000007440	RBM42	75	93.939	ENSETEG00000007878	RBM42	71	92.982	Echinops_telfairi
ENSFDAG00000007440	RBM42	99	97.987	ENSEASG00005001074	RBM42	100	97.987	Equus_asinus_asinus
ENSFDAG00000007440	RBM42	99	97.987	ENSECAG00000018215	RBM42	100	97.987	Equus_caballus
ENSFDAG00000007440	RBM42	99	96.660	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSFDAG00000007440	RBM42	99	96.468	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSFDAG00000007440	RBM42	100	96.458	ENSHGLG00000008418	RBM42	100	96.458	Heterocephalus_glaber_female
ENSFDAG00000007440	RBM42	100	96.458	ENSHGLG00100018667	RBM42	100	96.458	Heterocephalus_glaber_male
ENSFDAG00000007440	RBM42	100	96.696	ENSSTOG00000013050	RBM42	100	96.696	Ictidomys_tridecemlineatus
ENSFDAG00000007440	RBM42	100	96.231	ENSJJAG00000010421	Rbm42	100	96.231	Jaculus_jaculus
ENSFDAG00000007440	RBM42	97	91.471	ENSLAFG00000014993	RBM42	97	90.000	Loxodonta_africana
ENSFDAG00000007440	RBM42	99	96.247	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSFDAG00000007440	RBM42	99	96.652	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSFDAG00000007440	RBM42	100	95.625	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSFDAG00000007440	RBM42	99	96.247	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSFDAG00000007440	RBM42	99	96.868	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSFDAG00000007440	RBM42	100	96.009	ENSMOCG00000000405	Rbm42	100	96.009	Microtus_ochrogaster
ENSFDAG00000007440	RBM42	99	96.444	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.444	Mus_caroli
ENSFDAG00000007440	RBM42	99	96.444	ENSMUSG00000036733	Rbm42	99	96.444	Mus_musculus
ENSFDAG00000007440	RBM42	99	96.889	MGP_PahariEiJ_G0012770	Rbm42	99	96.889	Mus_pahari
ENSFDAG00000007440	RBM42	99	96.444	MGP_SPRETEiJ_G0030632	Rbm42	99	96.444	Mus_spretus
ENSFDAG00000007440	RBM42	99	96.889	ENSMPUG00000006288	RBM42	100	96.889	Mustela_putorius_furo
ENSFDAG00000007440	RBM42	99	93.737	ENSMLUG00000011334	RBM42	98	92.553	Myotis_lucifugus
ENSFDAG00000007440	RBM42	100	96.231	ENSNGAG00000019698	Rbm42	97	94.433	Nannospalax_galili
ENSFDAG00000007440	RBM42	70	94.345	ENSNLEG00000011272	-	94	90.000	Nomascus_leucogenys
ENSFDAG00000007440	RBM42	95	81.779	ENSMEUG00000016300	RBM42	98	83.015	Notamacropus_eugenii
ENSFDAG00000007440	RBM42	99	92.693	ENSOPRG00000001229	RBM42	98	86.383	Ochotona_princeps
ENSFDAG00000007440	RBM42	100	97.357	ENSODEG00000013705	RBM42	99	97.357	Octodon_degus
ENSFDAG00000007440	RBM42	99	95.806	ENSOCUG00000003337	RBM42	100	95.806	Oryctolagus_cuniculus
ENSFDAG00000007440	RBM42	99	95.616	ENSOGAG00000004144	RBM42	100	95.616	Otolemur_garnettii
ENSFDAG00000007440	RBM42	99	96.889	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSFDAG00000007440	RBM42	99	96.660	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSFDAG00000007440	RBM42	99	96.242	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSFDAG00000007440	RBM42	99	96.468	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSFDAG00000007440	RBM42	99	96.218	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSFDAG00000007440	RBM42	100	96.896	ENSPEMG00000012065	Rbm42	100	96.896	Peromyscus_maniculatus_bairdii
ENSFDAG00000007440	RBM42	99	95.876	ENSPPYG00000009871	RBM42	100	95.876	Pongo_abelii
ENSFDAG00000007440	RBM42	88	94.137	ENSPCAG00000013053	RBM42	98	79.149	Procavia_capensis
ENSFDAG00000007440	RBM42	99	96.868	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSFDAG00000007440	RBM42	70	96.418	ENSPCOG00000020672	RBM42	81	96.418	Propithecus_coquereli
ENSFDAG00000007440	RBM42	99	94.154	ENSPVAG00000012815	RBM42	98	92.553	Pteropus_vampyrus
ENSFDAG00000007440	RBM42	99	96.667	ENSRNOG00000024278	Rbm42	99	96.667	Rattus_norvegicus
ENSFDAG00000007440	RBM42	99	96.247	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSFDAG00000007440	RBM42	99	96.889	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSFDAG00000007440	RBM42	85	97.059	ENSSBOG00000030666	RBM42	100	97.059	Saimiri_boliviensis_boliviensis
ENSFDAG00000007440	RBM42	99	86.307	ENSSARG00000010724	RBM42	100	86.307	Sorex_araneus
ENSFDAG00000007440	RBM42	99	96.222	ENSSSCG00000002905	RBM42	100	96.222	Sus_scrofa
ENSFDAG00000007440	RBM42	99	96.889	ENSUAMG00000020711	RBM42	100	96.889	Ursus_americanus
ENSFDAG00000007440	RBM42	99	96.451	ENSUMAG00000020223	RBM42	100	96.451	Ursus_maritimus
ENSFDAG00000007440	RBM42	99	96.667	ENSVVUG00000015117	RBM42	100	96.667	Vulpes_vulpes