EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFDAG00000007489 (Gene tree)
Gene ID
104858370
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Fukomys_damarensis
Status
putative
Strand
Minus strand
Length
19205 bases
Position
chrKN121670.1:2722719-2741923
Accession
104858370
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFDAP00000021741Fox-1_CPF12414.89.6e-4411
ENSFDAP00000021740Fox-1_CPF12414.81.2e-4311
ENSFDAP00000021742Fox-1_CPF12414.81.2e-4311
ENSFDAP00000021740RRM_1PF00076.228.1e-1911
ENSFDAP00000021742RRM_1PF00076.228.6e-1911
ENSFDAP00000021741RRM_1PF00076.227.8e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFDAT00000010732RBFOX3-2011035-ENSFDAP00000021740344 (aa)--
ENSFDAT00000010733RBFOX3-202942-ENSFDAP00000021741313 (aa)--
ENSFDAT00000027763RBFOX3-2031077XM_010618534ENSFDAP00000021742358 (aa)XP_010616836-
Gene Model
Click here to download ENSFDAG00000007489's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007489's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFDAG00000007489RBFOX310057.801ENSFDAG00000007388RBFOX19154.567
ENSFDAG00000007489RBFOX38541.860ENSFDAG00000006204RBFOX28142.617
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFDAG00000007489RBFOX310092.541ENSG00000167281RBFOX39994.805Homo_sapiens
ENSFDAG00000007489RBFOX38082.000ENSAPOG00000015658-8954.469Acanthochromis_polyacanthus
ENSFDAG00000007489RBFOX310066.931ENSAPOG00000021630rbfox3b8265.110Acanthochromis_polyacanthus
ENSFDAG00000007489RBFOX39773.315ENSAMEG00000014170RBFOX39369.492Ailuropoda_melanoleuca
ENSFDAG00000007489RBFOX37066.065ENSACIG00000003768-8354.701Amphilophus_citrinellus
ENSFDAG00000007489RBFOX38378.000ENSACIG00000010817rbfox3b9560.169Amphilophus_citrinellus
ENSFDAG00000007489RBFOX37882.000ENSAOCG00000010786-8060.734Amphiprion_ocellaris
ENSFDAG00000007489RBFOX310065.934ENSAOCG00000012358rbfox3b8164.000Amphiprion_ocellaris
ENSFDAG00000007489RBFOX37693.750ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSFDAG00000007489RBFOX37882.000ENSAPEG00000015891-7956.836Amphiprion_percula
ENSFDAG00000007489RBFOX39661.823ENSATEG00000023101-9360.845Anabas_testudineus
ENSFDAG00000007489RBFOX310066.575ENSATEG00000019945rbfox3b9665.254Anabas_testudineus
ENSFDAG00000007489RBFOX310072.527ENSACAG00000016093RBFOX38372.779Anolis_carolinensis
ENSFDAG00000007489RBFOX310091.239ENSANAG00000023457RBFOX39191.239Aotus_nancymaae
ENSFDAG00000007489RBFOX310064.932ENSACLG00000025552-8164.000Astatotilapia_calliptera
ENSFDAG00000007489RBFOX310066.402ENSACLG00000020011rbfox3b9563.714Astatotilapia_calliptera
ENSFDAG00000007489RBFOX310063.014ENSAMXG00000042841rbfox3b8561.714Astyanax_mexicanus
ENSFDAG00000007489RBFOX39668.862ENSAMXG00000037246rbfox3a9065.625Astyanax_mexicanus
ENSFDAG00000007489RBFOX39788.820ENSBTAG00000006280RBFOX39790.062Bos_taurus
ENSFDAG00000007489RBFOX310091.713ENSCJAG00000009563RBFOX310091.713Callithrix_jacchus
ENSFDAG00000007489RBFOX37875.347ENSCAFG00000005547RBFOX310068.693Canis_familiaris
ENSFDAG00000007489RBFOX310092.553ENSCAFG00020008126RBFOX310092.553Canis_lupus_dingo
ENSFDAG00000007489RBFOX39789.918ENSCHIG00000009124RBFOX39891.008Capra_hircus
ENSFDAG00000007489RBFOX310093.094ENSTSYG00000029617RBFOX310093.094Carlito_syrichta
ENSFDAG00000007489RBFOX310093.883ENSCPOG00000021703RBFOX310093.883Cavia_porcellus
ENSFDAG00000007489RBFOX310091.239ENSCCAG00000028450RBFOX310091.239Cebus_capucinus
ENSFDAG00000007489RBFOX39786.335ENSCATG00000018349RBFOX310079.834Cercocebus_atys
ENSFDAG00000007489RBFOX310093.883ENSCLAG00000006449RBFOX310093.883Chinchilla_lanigera
ENSFDAG00000007489RBFOX310080.110ENSCSAG00000002355RBFOX310080.110Chlorocebus_sabaeus
ENSFDAG00000007489RBFOX39672.576ENSCPBG00000010904RBFOX39572.911Chrysemys_picta_bellii
ENSFDAG00000007489RBFOX310093.351ENSCANG00000043120RBFOX310093.351Colobus_angolensis_palliatus
ENSFDAG00000007489RBFOX39791.008ENSCGRG00001019476Rbfox39891.281Cricetulus_griseus_chok1gshd
ENSFDAG00000007489RBFOX39791.008ENSCGRG00000003268Rbfox39891.281Cricetulus_griseus_crigri
ENSFDAG00000007489RBFOX38382.000ENSCSEG00000015567RBFOX38958.530Cynoglossus_semilaevis
ENSFDAG00000007489RBFOX310052.589ENSCSEG00000020606RBFOX38354.167Cynoglossus_semilaevis
ENSFDAG00000007489RBFOX310065.934ENSCVAG00000006882rbfox3b8164.000Cyprinodon_variegatus
ENSFDAG00000007489RBFOX39664.773ENSDARG00000010083rbfox3a9165.057Danio_rerio
ENSFDAG00000007489RBFOX38278.000ENSDARG00000074310rbfox3b9663.223Danio_rerio
ENSFDAG00000007489RBFOX38579.032ENSDNOG00000039391RBFOX39473.315Dasypus_novemcinctus
ENSFDAG00000007489RBFOX39779.837ENSDORG00000005352Rbfox39879.837Dipodomys_ordii
ENSFDAG00000007489RBFOX310060.411ENSEBUG00000002129RBFOX39259.091Eptatretus_burgeri
ENSFDAG00000007489RBFOX38547.826ENSEBUG00000013559RBFOX37147.195Eptatretus_burgeri
ENSFDAG00000007489RBFOX39677.233ENSEASG00005005059RBFOX39579.251Equus_asinus_asinus
ENSFDAG00000007489RBFOX310080.110ENSECAG00000023811RBFOX310080.110Equus_caballus
ENSFDAG00000007489RBFOX38593.889ENSEEUG00000013974RBFOX39893.889Erinaceus_europaeus
ENSFDAG00000007489RBFOX310066.227ENSELUG00000017963rbfox3b9560.188Esox_lucius
ENSFDAG00000007489RBFOX35663.542ENSELUG00000009807-5067.442Esox_lucius
ENSFDAG00000007489RBFOX39786.646ENSFCAG00000002555RBFOX39787.888Felis_catus
ENSFDAG00000007489RBFOX39664.246ENSFALG00000012288RBFOX39261.250Ficedula_albicollis
ENSFDAG00000007489RBFOX310063.063ENSFHEG00000008550rbfox3b9560.815Fundulus_heteroclitus
ENSFDAG00000007489RBFOX310058.421ENSGMOG00000019304-9166.340Gadus_morhua
ENSFDAG00000007489RBFOX39673.487ENSGALG00000032889RBFOX38374.640Gallus_gallus
ENSFDAG00000007489RBFOX39864.407ENSGAFG00000005025rbfox3b8663.793Gambusia_affinis
ENSFDAG00000007489RBFOX39666.393ENSGACG00000002138-9666.940Gasterosteus_aculeatus
ENSFDAG00000007489RBFOX39672.576ENSGAGG00000020025RBFOX39572.911Gopherus_agassizii
ENSFDAG00000007489RBFOX310093.085ENSGGOG00000012546RBFOX310093.085Gorilla_gorilla
ENSFDAG00000007489RBFOX310065.435ENSHBUG00000023098-9064.560Haplochromis_burtoni
ENSFDAG00000007489RBFOX310066.402ENSHBUG00000018099rbfox3b8264.835Haplochromis_burtoni
ENSFDAG00000007489RBFOX310093.651ENSHGLG00000008679RBFOX310093.651Heterocephalus_glaber_female
ENSFDAG00000007489RBFOX39790.786ENSHGLG00100014739RBFOX39890.786Heterocephalus_glaber_male
ENSFDAG00000007489RBFOX37780.435ENSHCOG00000001863RBFOX38584.783Hippocampus_comes
ENSFDAG00000007489RBFOX39660.172ENSHCOG00000007444RBFOX37858.708Hippocampus_comes
ENSFDAG00000007489RBFOX39665.027ENSIPUG00000012010rbfox3a7088.462Ictalurus_punctatus
ENSFDAG00000007489RBFOX310059.392ENSIPUG00000021966rbfox3b9557.955Ictalurus_punctatus
ENSFDAG00000007489RBFOX39784.527ENSSTOG00000026817RBFOX39785.100Ictidomys_tridecemlineatus
ENSFDAG00000007489RBFOX310092.287ENSJJAG00000014167Rbfox310092.287Jaculus_jaculus
ENSFDAG00000007489RBFOX310065.934ENSKMAG00000006726rbfox3b8758.530Kryptolebias_marmoratus
ENSFDAG00000007489RBFOX39668.976ENSLBEG00000022508-8164.571Labrus_bergylta
ENSFDAG00000007489RBFOX310066.667ENSLBEG00000004030rbfox3b9559.605Labrus_bergylta
ENSFDAG00000007489RBFOX39658.937ENSLACG00000018409-9359.662Latimeria_chalumnae
ENSFDAG00000007489RBFOX39668.286ENSLOCG00000012267rbfox3a9068.571Lepisosteus_oculatus
ENSFDAG00000007489RBFOX39789.373ENSLAFG00000016623RBFOX39890.463Loxodonta_africana
ENSFDAG00000007489RBFOX310092.541ENSMFAG00000002247RBFOX310092.541Macaca_fascicularis
ENSFDAG00000007489RBFOX310092.145ENSMMUG00000023028RBFOX310092.145Macaca_mulatta
ENSFDAG00000007489RBFOX39787.466ENSMNEG00000041147RBFOX39787.466Macaca_nemestrina
ENSFDAG00000007489RBFOX39786.335ENSMLEG00000025686RBFOX310079.834Mandrillus_leucophaeus
ENSFDAG00000007489RBFOX38278.000ENSMAMG00000019810rbfox3b9559.544Mastacembelus_armatus
ENSFDAG00000007489RBFOX39660.000ENSMAMG00000020600-9259.786Mastacembelus_armatus
ENSFDAG00000007489RBFOX310066.402ENSMZEG00005000781rbfox3b8264.835Maylandia_zebra
ENSFDAG00000007489RBFOX36462.593ENSMZEG00005003055-5475.200Maylandia_zebra
ENSFDAG00000007489RBFOX35189.655ENSMGAG00000005600RBFOX36789.655Meleagris_gallopavo
ENSFDAG00000007489RBFOX39689.779ENSMAUG00000013543Rbfox39689.779Mesocricetus_auratus
ENSFDAG00000007489RBFOX310091.489ENSMICG00000014898RBFOX310091.489Microcebus_murinus
ENSFDAG00000007489RBFOX39789.646ENSMOCG00000015373Rbfox39890.736Microtus_ochrogaster
ENSFDAG00000007489RBFOX310064.578ENSMMOG00000020193rbfox3b9156.997Mola_mola
ENSFDAG00000007489RBFOX39674.352ENSMODG00000002089RBFOX38375.504Monodelphis_domestica
ENSFDAG00000007489RBFOX310065.110ENSMALG00000020407rbfox3b8163.143Monopterus_albus
ENSFDAG00000007489RBFOX310066.491ENSMALG00000018270-9260.169Monopterus_albus
ENSFDAG00000007489RBFOX310091.755MGP_CAROLIEiJ_G0017487Rbfox310097.041Mus_caroli
ENSFDAG00000007489RBFOX39790.736ENSMUSG00000025576Rbfox39596.250Mus_musculus
ENSFDAG00000007489RBFOX310092.287MGP_PahariEiJ_G0018614Rbfox310097.041Mus_pahari
ENSFDAG00000007489RBFOX310092.021MGP_SPRETEiJ_G0018331Rbfox310097.041Mus_spretus
ENSFDAG00000007489RBFOX39769.802ENSMPUG00000012319RBFOX39271.782Mustela_putorius_furo
ENSFDAG00000007489RBFOX310091.755ENSNGAG00000018006Rbfox310091.755Nannospalax_galili
ENSFDAG00000007489RBFOX37693.333ENSNBRG00000022885-7893.333Neolamprologus_brichardi
ENSFDAG00000007489RBFOX310064.917ENSNBRG00000010102rbfox3b7492.593Neolamprologus_brichardi
ENSFDAG00000007489RBFOX374100.000ENSNLEG00000000153-91100.000Nomascus_leucogenys
ENSFDAG00000007489RBFOX39661.095ENSMEUG00000004218-9661.383Notamacropus_eugenii
ENSFDAG00000007489RBFOX37197.191ENSOPRG00000016279-7597.191Ochotona_princeps
ENSFDAG00000007489RBFOX310093.883ENSODEG00000009433RBFOX310093.883Octodon_degus
ENSFDAG00000007489RBFOX310065.205ENSONIG00000007282-8764.286Oreochromis_niloticus
ENSFDAG00000007489RBFOX310071.916ENSONIG00000009549rbfox3b9671.038Oreochromis_niloticus
ENSFDAG00000007489RBFOX37875.789ENSOCUG00000014217RBFOX37877.544Oryctolagus_cuniculus
ENSFDAG00000007489RBFOX310066.755ENSORLG00000000905rbfox3b6762.368Oryzias_latipes
ENSFDAG00000007489RBFOX310066.755ENSORLG00020018030rbfox3b8960.502Oryzias_latipes_hni
ENSFDAG00000007489RBFOX310065.479ENSORLG00015009200rbfox3b9178.000Oryzias_latipes_hsok
ENSFDAG00000007489RBFOX36468.605ENSOMEG00000014677rbfox3b7668.075Oryzias_melastigma
ENSFDAG00000007489RBFOX39676.945ENSOGAG00000029595RBFOX39073.575Otolemur_garnettii
ENSFDAG00000007489RBFOX36586.441ENSOARG00000002908RBFOX39157.453Ovis_aries
ENSFDAG00000007489RBFOX39291.964ENSPPAG00000025383RBFOX39690.354Pan_paniscus
ENSFDAG00000007489RBFOX39786.335ENSPPRG00000007819RBFOX39787.578Panthera_pardus
ENSFDAG00000007489RBFOX310093.085ENSPTRG00000009727RBFOX310093.085Pan_troglodytes
ENSFDAG00000007489RBFOX39786.335ENSPANG00000019837RBFOX310079.834Papio_anubis
ENSFDAG00000007489RBFOX310054.737ENSPKIG00000022633-8553.591Paramormyrops_kingsleyae
ENSFDAG00000007489RBFOX39668.132ENSPKIG00000010299rbfox3a8561.155Paramormyrops_kingsleyae
ENSFDAG00000007489RBFOX38564.331ENSPMGG00000008000rbfox3b7762.207Periophthalmus_magnuspinnatus
ENSFDAG00000007489RBFOX39789.918ENSPEMG00000010500Rbfox39891.008Peromyscus_maniculatus_bairdii
ENSFDAG00000007489RBFOX36257.769ENSPMAG00000008689rbfox3b9956.972Petromyzon_marinus
ENSFDAG00000007489RBFOX39688.473ENSPCIG00000005766RBFOX39688.761Phascolarctos_cinereus
ENSFDAG00000007489RBFOX310066.931ENSPFOG00000018294rbfox3b9264.286Poecilia_formosa
ENSFDAG00000007489RBFOX36381.250ENSPLAG00000000481rbfox3b7961.688Poecilia_latipinna
ENSFDAG00000007489RBFOX310063.063ENSPMEG00000022997rbfox3b9560.815Poecilia_mexicana
ENSFDAG00000007489RBFOX310066.301ENSPREG00000012886rbfox3b8664.286Poecilia_reticulata
ENSFDAG00000007489RBFOX310077.654ENSPPYG00000008704RBFOX39677.654Pongo_abelii
ENSFDAG00000007489RBFOX39685.879ENSPCAG00000001401RBFOX39687.032Procavia_capensis
ENSFDAG00000007489RBFOX310091.713ENSPCOG00000012689RBFOX310091.436Propithecus_coquereli
ENSFDAG00000007489RBFOX39687.608ENSPVAG00000015243RBFOX39687.896Pteropus_vampyrus
ENSFDAG00000007489RBFOX37693.333ENSPNYG00000009079-7493.333Pundamilia_nyererei
ENSFDAG00000007489RBFOX37292.593ENSPNYG00000010414rbfox3b7492.593Pundamilia_nyererei
ENSFDAG00000007489RBFOX39666.120ENSPNAG00000002889rbfox3a9358.075Pygocentrus_nattereri
ENSFDAG00000007489RBFOX38280.000ENSPNAG00000018173rbfox3b8553.628Pygocentrus_nattereri
ENSFDAG00000007489RBFOX310092.287ENSRNOG00000003386Rbfox310092.287Rattus_norvegicus
ENSFDAG00000007489RBFOX39786.646ENSRBIG00000040449RBFOX38586.335Rhinopithecus_bieti
ENSFDAG00000007489RBFOX39786.646ENSRROG00000000766RBFOX310080.110Rhinopithecus_roxellana
ENSFDAG00000007489RBFOX310092.287ENSSBOG00000031591RBFOX310092.287Saimiri_boliviensis_boliviensis
ENSFDAG00000007489RBFOX39572.785ENSSHAG00000016076RBFOX39573.101Sarcophilus_harrisii
ENSFDAG00000007489RBFOX39668.132ENSSFOG00015023260rbfox3a8964.577Scleropages_formosus
ENSFDAG00000007489RBFOX39653.714ENSSFOG00015004716RBFOX38950.943Scleropages_formosus
ENSFDAG00000007489RBFOX310063.797ENSSMAG00000012618rbfox3b7161.475Scophthalmus_maximus
ENSFDAG00000007489RBFOX310063.661ENSSMAG00000019052-9561.823Scophthalmus_maximus
ENSFDAG00000007489RBFOX310063.063ENSSDUG00000023183rbfox3b9560.815Seriola_dumerili
ENSFDAG00000007489RBFOX39659.714ENSSDUG00000015801-8077.966Seriola_dumerili
ENSFDAG00000007489RBFOX310065.934ENSSLDG00000000149rbfox3b8164.000Seriola_lalandi_dorsalis
ENSFDAG00000007489RBFOX37882.000ENSSLDG00000016098-9060.858Seriola_lalandi_dorsalis
ENSFDAG00000007489RBFOX39671.920ENSSPUG00000011733RBFOX39573.066Sphenodon_punctatus
ENSFDAG00000007489RBFOX38378.000ENSSPAG00000017571rbfox3b8062.537Stegastes_partitus
ENSFDAG00000007489RBFOX38860.714ENSSPAG00000004898-7859.797Stegastes_partitus
ENSFDAG00000007489RBFOX38890.060ENSSSCG00000039498RBFOX310091.265Sus_scrofa
ENSFDAG00000007489RBFOX310063.660ENSTRUG00000004894rbfox3b9061.518Takifugu_rubripes
ENSFDAG00000007489RBFOX310059.698ENSTNIG00000011278rbfox3b9255.924Tetraodon_nigroviridis
ENSFDAG00000007489RBFOX39658.172ENSTBEG00000004296-9658.172Tupaia_belangeri
ENSFDAG00000007489RBFOX39684.150ENSTTRG00000003676RBFOX39685.303Tursiops_truncatus
ENSFDAG00000007489RBFOX39777.054ENSUAMG00000004668RBFOX39777.337Ursus_americanus
ENSFDAG00000007489RBFOX310092.265ENSVVUG00000017864RBFOX38992.265Vulpes_vulpes
ENSFDAG00000007489RBFOX310060.169ENSXETG00000020236rbfox39156.041Xenopus_tropicalis
ENSFDAG00000007489RBFOX310065.289ENSXCOG00000018262rbfox3b9559.770Xiphophorus_couchianus
ENSFDAG00000007489RBFOX310066.931ENSXMAG00000012939rbfox3b9554.737Xiphophorus_maculatus

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