EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSFDAG00000007720 (Gene tree)
Gene ID
104874883
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Fukomys_damarensis
Status
putative
Strand
Minus strand
Length
55873 bases
Position
chrKN123351.1:1293879-1349751
Accession
104874883
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFDAP00000021416tRNA_anti-codonPF01336.251.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFDAT00000011012RPA1-2011845XM_010642145ENSFDAP00000021416615 (aa)XP_010640447-
Gene Model
Click here to download ENSFDAG00000007720's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007720's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFDAG00000007720RPA19957.510ENSAPOG00000019409RPA19657.510Acanthochromis_polyacanthus
ENSFDAG00000007720RPA19962.357ENSAPOG00000011658rpa19962.908Acanthochromis_polyacanthus
ENSFDAG00000007720RPA19988.633ENSAMEG00000007706RPA19888.633Ailuropoda_melanoleuca
ENSFDAG00000007720RPA19558.784ENSACIG00000012881RPA110058.784Amphilophus_citrinellus
ENSFDAG00000007720RPA19658.744ENSACIG00000007277rpa19958.744Amphilophus_citrinellus
ENSFDAG00000007720RPA19954.294ENSAOCG00000009003RPA19954.211Amphiprion_ocellaris
ENSFDAG00000007720RPA19963.725ENSAOCG00000023376rpa19964.076Amphiprion_ocellaris
ENSFDAG00000007720RPA19963.725ENSAPEG00000008634rpa19964.076Amphiprion_percula
ENSFDAG00000007720RPA19952.853ENSAPEG00000019132RPA19953.604Amphiprion_percula
ENSFDAG00000007720RPA19565.464ENSATEG00000022024rpa19965.464Anabas_testudineus
ENSFDAG00000007720RPA19955.283ENSATEG00000006443RPA19955.283Anabas_testudineus
ENSFDAG00000007720RPA19864.993ENSAPLG00000012442RPA110065.140Anas_platyrhynchos
ENSFDAG00000007720RPA110062.258ENSACAG00000014490RPA19962.581Anolis_carolinensis
ENSFDAG00000007720RPA19889.018ENSANAG00000023456RPA19989.018Aotus_nancymaae
ENSFDAG00000007720RPA19364.460ENSACLG00000006640rpa19964.460Astatotilapia_calliptera
ENSFDAG00000007720RPA19957.433ENSACLG00000005223RPA19957.433Astatotilapia_calliptera
ENSFDAG00000007720RPA19961.401ENSAMXG00000008418rpa19961.726Astyanax_mexicanus
ENSFDAG00000007720RPA19988.599ENSBTAG00000009711RPA19988.599Bos_taurus
ENSFDAG00000007720RPA19988.436ENSCJAG00000001848RPA19988.436Callithrix_jacchus
ENSFDAG00000007720RPA19989.088ENSCAFG00000019249RPA19989.088Canis_familiaris
ENSFDAG00000007720RPA19989.088ENSCAFG00020009847RPA19989.088Canis_lupus_dingo
ENSFDAG00000007720RPA19988.436ENSCHIG00000026308RPA19988.436Capra_hircus
ENSFDAG00000007720RPA19989.431ENSTSYG00000003482-9989.431Carlito_syrichta
ENSFDAG00000007720RPA19993.974ENSCPOG00000000035RPA19993.974Cavia_porcellus
ENSFDAG00000007720RPA19978.444ENSCCAG00000010981RPA19978.444Cebus_capucinus
ENSFDAG00000007720RPA19990.228ENSCLAG00000015045-9990.228Chinchilla_lanigera
ENSFDAG00000007720RPA19995.114ENSCLAG00000005185-9995.114Chinchilla_lanigera
ENSFDAG00000007720RPA19978.120ENSCSAG00000013833RPA19978.120Chlorocebus_sabaeus
ENSFDAG00000007720RPA17193.364ENSCHOG00000009454-9993.364Choloepus_hoffmanni
ENSFDAG00000007720RPA19586.177ENSCHOG00000013540-9986.177Choloepus_hoffmanni
ENSFDAG00000007720RPA19976.710ENSCPBG00000020377RPA19977.504Chrysemys_picta_bellii
ENSFDAG00000007720RPA19942.717ENSCING00000023482-9842.717Ciona_intestinalis
ENSFDAG00000007720RPA19885.572ENSCANG00000030911RPA19985.572Colobus_angolensis_palliatus
ENSFDAG00000007720RPA19989.159ENSCGRG00001008197Rpa19989.159Cricetulus_griseus_chok1gshd
ENSFDAG00000007720RPA18289.152ENSCGRG00000000582Rpa19989.152Cricetulus_griseus_crigri
ENSFDAG00000007720RPA19950.869ENSCSEG00000012726RPA19852.470Cynoglossus_semilaevis
ENSFDAG00000007720RPA19960.098ENSCSEG00000013066rpa19960.098Cynoglossus_semilaevis
ENSFDAG00000007720RPA19963.218ENSCVAG00000019431rpa19964.187Cyprinodon_variegatus
ENSFDAG00000007720RPA19654.141ENSCVAG00000013446-9654.141Cyprinodon_variegatus
ENSFDAG00000007720RPA19962.764ENSDARG00000003938rpa19962.764Danio_rerio
ENSFDAG00000007720RPA19988.449ENSDNOG00000017218RPA19888.449Dasypus_novemcinctus
ENSFDAG00000007720RPA19990.228ENSDORG00000006199Rpa19990.228Dipodomys_ordii
ENSFDAG00000007720RPA19942.114FBgn0010173RpA-709842.557Drosophila_melanogaster
ENSFDAG00000007720RPA18386.598ENSETEG00000017608RPA18286.598Echinops_telfairi
ENSFDAG00000007720RPA19889.386ENSEASG00005009372RPA19987.520Equus_asinus_asinus
ENSFDAG00000007720RPA19990.065ENSECAG00000023886RPA19990.065Equus_caballus
ENSFDAG00000007720RPA16891.148ENSEEUG00000002186-6891.148Erinaceus_europaeus
ENSFDAG00000007720RPA19960.356ENSELUG00000021071rpa19960.714Esox_lucius
ENSFDAG00000007720RPA18856.514ENSELUG00000006136RPA19956.514Esox_lucius
ENSFDAG00000007720RPA19988.293ENSFCAG00000006306RPA19988.293Felis_catus
ENSFDAG00000007720RPA110075.444ENSFALG00000006575RPA19975.444Ficedula_albicollis
ENSFDAG00000007720RPA19962.336ENSFHEG00000003580rpa19962.336Fundulus_heteroclitus
ENSFDAG00000007720RPA19958.756ENSGMOG00000010382rpa19958.756Gadus_morhua
ENSFDAG00000007720RPA110074.026ENSGALG00000003072RPA19974.026Gallus_gallus
ENSFDAG00000007720RPA110054.532ENSGAFG00000020953RPA110054.932Gambusia_affinis
ENSFDAG00000007720RPA19962.623ENSGAFG00000012916rpa19962.623Gambusia_affinis
ENSFDAG00000007720RPA19961.011ENSGACG00000010856rpa19961.011Gasterosteus_aculeatus
ENSFDAG00000007720RPA19976.710ENSGAGG00000013611RPA19976.710Gopherus_agassizii
ENSFDAG00000007720RPA19986.971ENSGGOG00000014186RPA19986.971Gorilla_gorilla
ENSFDAG00000007720RPA19963.725ENSHBUG00000017773rpa19963.725Haplochromis_burtoni
ENSFDAG00000007720RPA19653.577ENSHBUG00000009348RPA19953.577Haplochromis_burtoni
ENSFDAG00000007720RPA19997.557ENSHGLG00000008846RPA110097.557Heterocephalus_glaber_female
ENSFDAG00000007720RPA19997.557ENSHGLG00100017755-10097.557Heterocephalus_glaber_male
ENSFDAG00000007720RPA19991.042ENSHGLG00100000799-9991.042Heterocephalus_glaber_male
ENSFDAG00000007720RPA19982.410ENSHGLG00100002005-9982.410Heterocephalus_glaber_male
ENSFDAG00000007720RPA110043.730ENSHCOG00000000351RPA19943.730Hippocampus_comes
ENSFDAG00000007720RPA19962.075ENSHCOG00000001401rpa19962.418Hippocampus_comes
ENSFDAG00000007720RPA19962.439ENSIPUG00000004400rpa19962.602Ictalurus_punctatus
ENSFDAG00000007720RPA19883.882ENSSTOG00000022475RPA19883.882Ictidomys_tridecemlineatus
ENSFDAG00000007720RPA19591.809ENSJJAG00000000876Rpa19891.809Jaculus_jaculus
ENSFDAG00000007720RPA19961.678ENSKMAG00000005605rpa19962.316Kryptolebias_marmoratus
ENSFDAG00000007720RPA110054.693ENSKMAG00000000234RPA110054.693Kryptolebias_marmoratus
ENSFDAG00000007720RPA19963.699ENSLBEG00000002281RPA18663.699Labrus_bergylta
ENSFDAG00000007720RPA19963.072ENSLBEG00000021604rpa19963.072Labrus_bergylta
ENSFDAG00000007720RPA18168.000ENSLACG00000007210RPA19968.000Latimeria_chalumnae
ENSFDAG00000007720RPA19966.558ENSLOCG00000006397rpa19966.558Lepisosteus_oculatus
ENSFDAG00000007720RPA19986.517ENSLAFG00000015354RPA19986.517Loxodonta_africana
ENSFDAG00000007720RPA18290.316ENSMFAG00000036138-10090.316Macaca_fascicularis
ENSFDAG00000007720RPA19890.050ENSMMUG00000011604-9990.050Macaca_mulatta
ENSFDAG00000007720RPA19982.764ENSMMUG00000002442-9982.764Macaca_mulatta
ENSFDAG00000007720RPA19986.645ENSMNEG00000031632-9986.645Macaca_nemestrina
ENSFDAG00000007720RPA18885.987ENSMNEG00000029837-9985.987Macaca_nemestrina
ENSFDAG00000007720RPA19884.272ENSMLEG00000038768-9984.272Mandrillus_leucophaeus
ENSFDAG00000007720RPA19964.216ENSMAMG00000017993rpa19964.216Mastacembelus_armatus
ENSFDAG00000007720RPA19952.593ENSMAMG00000020097RPA19952.671Mastacembelus_armatus
ENSFDAG00000007720RPA19957.433ENSMZEG00005024731RPA19957.433Maylandia_zebra
ENSFDAG00000007720RPA19963.725ENSMZEG00005007551rpa19963.725Maylandia_zebra
ENSFDAG00000007720RPA19974.262ENSMGAG00000005315RPA19874.262Meleagris_gallopavo
ENSFDAG00000007720RPA19889.500ENSMAUG00000010474Rpa19989.500Mesocricetus_auratus
ENSFDAG00000007720RPA19988.925ENSMICG00000012867RPA19988.925Microcebus_murinus
ENSFDAG00000007720RPA19989.233ENSMOCG00000013019Rpa19989.233Microtus_ochrogaster
ENSFDAG00000007720RPA19961.765ENSMMOG00000014292rpa19963.007Mola_mola
ENSFDAG00000007720RPA19560.987ENSMMOG00000010868RPA19760.987Mola_mola
ENSFDAG00000007720RPA19983.713ENSMODG00000010549RPA19983.713Monodelphis_domestica
ENSFDAG00000007720RPA19563.242ENSMALG00000001208RPA18163.242Monopterus_albus
ENSFDAG00000007720RPA19964.590ENSMALG00000011453rpa19964.918Monopterus_albus
ENSFDAG00000007720RPA19988.474MGP_CAROLIEiJ_G0016734Rpa19988.474Mus_caroli
ENSFDAG00000007720RPA19986.656ENSMUSG00000000751Rpa19986.656Mus_musculus
ENSFDAG00000007720RPA19989.661MGP_PahariEiJ_G0017871Rpa19989.661Mus_pahari
ENSFDAG00000007720RPA19986.677MGP_SPRETEiJ_G0017577Rpa19986.677Mus_spretus
ENSFDAG00000007720RPA19987.785ENSMPUG00000013119RPA19987.785Mustela_putorius_furo
ENSFDAG00000007720RPA19985.299ENSMLUG00000006113RPA19985.299Myotis_lucifugus
ENSFDAG00000007720RPA19589.267ENSNGAG00000004522Rpa19489.267Nannospalax_galili
ENSFDAG00000007720RPA19464.249ENSNBRG00000020595rpa19964.249Neolamprologus_brichardi
ENSFDAG00000007720RPA19756.449ENSNBRG00000009672RPA19556.449Neolamprologus_brichardi
ENSFDAG00000007720RPA19989.414ENSNLEG00000017149RPA19989.414Nomascus_leucogenys
ENSFDAG00000007720RPA19873.920ENSMEUG00000006714RPA19973.920Notamacropus_eugenii
ENSFDAG00000007720RPA19591.765ENSODEG00000009038RPA19691.765Octodon_degus
ENSFDAG00000007720RPA19964.274ENSONIG00000013135rpa19964.274Oreochromis_niloticus
ENSFDAG00000007720RPA19883.389ENSOANG00000010880RPA19983.721Ornithorhynchus_anatinus
ENSFDAG00000007720RPA19985.559ENSOCUG00000001504RPA19985.559Oryctolagus_cuniculus
ENSFDAG00000007720RPA19963.072ENSORLG00000004856rpa19963.072Oryzias_latipes
ENSFDAG00000007720RPA19953.729ENSORLG00000003368RPA19953.729Oryzias_latipes
ENSFDAG00000007720RPA19963.235ENSORLG00020008980rpa19963.235Oryzias_latipes_hni
ENSFDAG00000007720RPA19952.765ENSORLG00020015284RPA19952.765Oryzias_latipes_hni
ENSFDAG00000007720RPA19963.235ENSORLG00015013982rpa19963.235Oryzias_latipes_hsok
ENSFDAG00000007720RPA19954.729ENSORLG00015020383RPA19954.729Oryzias_latipes_hsok
ENSFDAG00000007720RPA17160.230ENSORLG00015005867-9860.230Oryzias_latipes_hsok
ENSFDAG00000007720RPA19960.621ENSOMEG00000004704rpa19960.621Oryzias_melastigma
ENSFDAG00000007720RPA19556.261ENSOMEG00000011040RPA19956.261Oryzias_melastigma
ENSFDAG00000007720RPA19483.158ENSOGAG00000029379-9993.048Otolemur_garnettii
ENSFDAG00000007720RPA19988.762ENSOGAG00000005581-9988.762Otolemur_garnettii
ENSFDAG00000007720RPA19988.436ENSOARG00000014479RPA19988.436Ovis_aries
ENSFDAG00000007720RPA19989.414ENSPPAG00000039680RPA19989.414Pan_paniscus
ENSFDAG00000007720RPA19988.130ENSPPRG00000011807RPA19988.130Panthera_pardus
ENSFDAG00000007720RPA19987.805ENSPTIG00000007898RPA19987.805Panthera_tigris_altaica
ENSFDAG00000007720RPA19989.902ENSPTRG00000008539RPA19989.902Pan_troglodytes
ENSFDAG00000007720RPA19989.902ENSPANG00000024592RPA19989.902Papio_anubis
ENSFDAG00000007720RPA19561.235ENSPKIG00000008053rpa19461.578Paramormyrops_kingsleyae
ENSFDAG00000007720RPA19776.000ENSPSIG00000015617RPA19976.000Pelodiscus_sinensis
ENSFDAG00000007720RPA19862.189ENSPMGG00000011589rpa19962.355Periophthalmus_magnuspinnatus
ENSFDAG00000007720RPA19953.971ENSPMGG00000000543RPA19955.830Periophthalmus_magnuspinnatus
ENSFDAG00000007720RPA19989.886ENSPEMG00000021061Rpa19989.886Peromyscus_maniculatus_bairdii
ENSFDAG00000007720RPA19982.276ENSPCIG00000019049RPA19982.927Phascolarctos_cinereus
ENSFDAG00000007720RPA19962.993ENSPFOG00000003987rpa19962.993Poecilia_formosa
ENSFDAG00000007720RPA19963.158ENSPLAG00000004984rpa19963.158Poecilia_latipinna
ENSFDAG00000007720RPA19554.267ENSPLAG00000008844-9754.267Poecilia_latipinna
ENSFDAG00000007720RPA19554.808ENSPMEG00000003627-9755.072Poecilia_mexicana
ENSFDAG00000007720RPA19963.158ENSPMEG00000020602rpa19963.972Poecilia_mexicana
ENSFDAG00000007720RPA19256.162ENSPREG00000010174rpa19556.162Poecilia_reticulata
ENSFDAG00000007720RPA110059.443ENSPREG00000010119RPA19959.443Poecilia_reticulata
ENSFDAG00000007720RPA19989.251ENSPCOG00000001799RPA19989.251Propithecus_coquereli
ENSFDAG00000007720RPA19988.925ENSPVAG00000002149RPA19988.925Pteropus_vampyrus
ENSFDAG00000007720RPA19957.121ENSPNYG00000024165RPA19957.121Pundamilia_nyererei
ENSFDAG00000007720RPA19963.889ENSPNYG00000016316rpa19964.410Pundamilia_nyererei
ENSFDAG00000007720RPA19854.983ENSPNAG00000008599rpa19953.376Pygocentrus_nattereri
ENSFDAG00000007720RPA19989.070ENSRNOG00000003123Rpa19989.070Rattus_norvegicus
ENSFDAG00000007720RPA19988.943ENSRBIG00000036587RPA19988.943Rhinopithecus_bieti
ENSFDAG00000007720RPA19983.740ENSRROG00000043278RPA19983.740Rhinopithecus_roxellana
ENSFDAG00000007720RPA19732.677YAR007CRFA19732.677Saccharomyces_cerevisiae
ENSFDAG00000007720RPA19885.572ENSSBOG00000030233RPA19985.714Saimiri_boliviensis_boliviensis
ENSFDAG00000007720RPA19983.770ENSSHAG00000007969RPA19883.934Sarcophilus_harrisii
ENSFDAG00000007720RPA19964.869ENSSFOG00015005362rpa19264.869Scleropages_formosus
ENSFDAG00000007720RPA19952.640ENSSMAG00000019746RPA19952.941Scophthalmus_maximus
ENSFDAG00000007720RPA19964.706ENSSDUG00000011949rpa19964.706Seriola_dumerili
ENSFDAG00000007720RPA19953.372ENSSDUG00000016358RPA19952.786Seriola_dumerili
ENSFDAG00000007720RPA19965.033ENSSLDG00000011806rpa19965.033Seriola_lalandi_dorsalis
ENSFDAG00000007720RPA19952.701ENSSLDG00000020784RPA19952.993Seriola_lalandi_dorsalis
ENSFDAG00000007720RPA19869.652ENSSARG00000007506RPA19969.652Sorex_araneus
ENSFDAG00000007720RPA19772.605ENSSPUG00000007223RPA19972.605Sphenodon_punctatus
ENSFDAG00000007720RPA19657.797ENSSPAG00000011165RPA19757.679Stegastes_partitus
ENSFDAG00000007720RPA19963.725ENSSPAG00000009903rpa19963.725Stegastes_partitus
ENSFDAG00000007720RPA19888.519ENSSSCG00000017822RPA19988.519Sus_scrofa
ENSFDAG00000007720RPA110074.838ENSTGUG00000005775RPA19974.838Taeniopygia_guttata
ENSFDAG00000007720RPA19955.556ENSTRUG00000000405RPA19755.086Takifugu_rubripes
ENSFDAG00000007720RPA19964.309ENSTRUG00000003616rpa19964.309Takifugu_rubripes
ENSFDAG00000007720RPA19965.309ENSTNIG00000016199rpa19965.309Tetraodon_nigroviridis
ENSFDAG00000007720RPA17895.349ENSTBEG00000002709RPA18195.349Tupaia_belangeri
ENSFDAG00000007720RPA19988.111ENSTTRG00000001169RPA19988.111Tursiops_truncatus
ENSFDAG00000007720RPA18994.231ENSUAMG00000015676RPA19794.231Ursus_americanus
ENSFDAG00000007720RPA19988.925ENSUMAG00000009328RPA19988.925Ursus_maritimus
ENSFDAG00000007720RPA19987.622ENSVPAG00000009443RPA19987.622Vicugna_pacos
ENSFDAG00000007720RPA19989.251ENSVVUG00000021715RPA19989.251Vulpes_vulpes
ENSFDAG00000007720RPA19974.918ENSXETG00000013538rpa19975.450Xenopus_tropicalis
ENSFDAG00000007720RPA19556.218ENSXCOG00000009899-10056.218Xiphophorus_couchianus
ENSFDAG00000007720RPA19360.659ENSXCOG00000010068rpa19461.828Xiphophorus_couchianus
ENSFDAG00000007720RPA19962.153ENSXMAG00000004102rpa19963.700Xiphophorus_maculatus
ENSFDAG00000007720RPA110064.692ENSXMAG00000010333RPA18964.692Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us