EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000007858 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 2861 bases
Position: chrKN121891.1:1003182-1006042
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000021229	zf-RNPHF	PF08080.12	7.7e-23	1	1
ENSFDAP00000021229	RRM_1	PF00076.22	1.4e-28	1	2
ENSFDAP00000021229	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000011178	-	1212	-	ENSFDAP00000021229	403 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000007858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000007858	-	87	75.852	ENSFDAG00000014800	-	96	75.852
ENSFDAG00000007858	-	87	73.580	ENSFDAG00000021452	-	77	73.580
ENSFDAG00000007858	-	85	44.981	ENSFDAG00000014531	-	96	43.704
ENSFDAG00000007858	-	98	90.585	ENSFDAG00000011431	-	99	90.585
ENSFDAG00000007858	-	52	71.074	ENSFDAG00000008155	-	96	62.264
ENSFDAG00000007858	-	99	72.569	ENSFDAG00000015308	-	96	72.569
ENSFDAG00000007858	-	87	75.725	ENSFDAG00000019725	HNRNPH1	77	75.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000007858	-	98	88.295	ENSG00000169813	HNRNPF	99	93.814	Homo_sapiens
ENSFDAG00000007858	-	87	97.443	ENSAMEG00000018983	HNRNPF	99	97.443	Ailuropoda_melanoleuca
ENSFDAG00000007858	-	98	87.277	ENSANAG00000033285	-	95	87.277	Aotus_nancymaae
ENSFDAG00000007858	-	99	76.866	ENSANAG00000033452	-	95	76.866	Aotus_nancymaae
ENSFDAG00000007858	-	87	78.371	ENSBTAG00000020513	-	84	78.371	Bos_taurus
ENSFDAG00000007858	-	87	97.159	ENSBTAG00000008853	HNRNPF	99	97.159	Bos_taurus
ENSFDAG00000007858	-	98	88.295	ENSCJAG00000008291	HNRNPF	99	88.295	Callithrix_jacchus
ENSFDAG00000007858	-	87	97.443	ENSCAFG00000007044	HNRNPF	99	97.443	Canis_familiaris
ENSFDAG00000007858	-	87	70.028	ENSCHIG00000022971	-	85	70.028	Capra_hircus
ENSFDAG00000007858	-	87	97.159	ENSCHIG00000006714	HNRNPF	99	97.159	Capra_hircus
ENSFDAG00000007858	-	98	88.550	ENSTSYG00000030439	-	99	88.550	Carlito_syrichta
ENSFDAG00000007858	-	87	82.436	ENSTSYG00000002112	-	98	82.436	Carlito_syrichta
ENSFDAG00000007858	-	98	90.585	ENSCAPG00000011521	HNRNPF	99	90.585	Cavia_aperea
ENSFDAG00000007858	-	98	90.585	ENSCPOG00000003678	HNRNPF	99	90.585	Cavia_porcellus
ENSFDAG00000007858	-	98	88.041	ENSCCAG00000031457	-	99	88.041	Cebus_capucinus
ENSFDAG00000007858	-	87	75.284	ENSCCAG00000028687	-	84	75.284	Cebus_capucinus
ENSFDAG00000007858	-	98	90.585	ENSCLAG00000005161	HNRNPF	99	90.585	Chinchilla_lanigera
ENSFDAG00000007858	-	98	86.768	ENSCANG00000003086	-	99	86.768	Colobus_angolensis_palliatus
ENSFDAG00000007858	-	86	71.264	ENSCGRG00001016206	-	78	71.264	Cricetulus_griseus_chok1gshd
ENSFDAG00000007858	-	98	89.313	ENSCGRG00001016276	Hnrnpf	99	89.313	Cricetulus_griseus_chok1gshd
ENSFDAG00000007858	-	87	94.318	ENSDNOG00000030849	-	99	94.318	Dasypus_novemcinctus
ENSFDAG00000007858	-	87	87.216	ENSDORG00000005431	-	84	87.216	Dipodomys_ordii
ENSFDAG00000007858	-	98	82.443	ENSDORG00000008260	-	95	82.443	Dipodomys_ordii
ENSFDAG00000007858	-	98	88.550	ENSDORG00000024298	-	95	88.550	Dipodomys_ordii
ENSFDAG00000007858	-	98	86.514	ENSDORG00000024936	-	99	86.514	Dipodomys_ordii
ENSFDAG00000007858	-	87	97.443	ENSEASG00005006903	HNRNPF	99	97.443	Equus_asinus_asinus
ENSFDAG00000007858	-	87	97.443	ENSECAG00000003229	HNRNPF	97	97.443	Equus_caballus
ENSFDAG00000007858	-	87	97.443	ENSFCAG00000028219	-	99	97.443	Felis_catus
ENSFDAG00000007858	-	87	96.023	ENSGGOG00000010867	HNRNPF	90	96.023	Gorilla_gorilla
ENSFDAG00000007858	-	98	87.277	ENSHGLG00000010276	-	95	87.277	Heterocephalus_glaber_female
ENSFDAG00000007858	-	87	89.548	ENSHGLG00000017607	-	89	89.548	Heterocephalus_glaber_female
ENSFDAG00000007858	-	98	90.585	ENSHGLG00000000147	-	95	90.585	Heterocephalus_glaber_female
ENSFDAG00000007858	-	87	94.602	ENSHGLG00000014139	-	94	94.602	Heterocephalus_glaber_female
ENSFDAG00000007858	-	98	87.277	ENSHGLG00100019558	-	95	87.277	Heterocephalus_glaber_male
ENSFDAG00000007858	-	98	88.041	ENSHGLG00100019572	-	95	88.041	Heterocephalus_glaber_male
ENSFDAG00000007858	-	87	86.364	ENSHGLG00100010905	-	94	86.364	Heterocephalus_glaber_male
ENSFDAG00000007858	-	98	89.567	ENSHGLG00100020825	-	97	89.567	Heterocephalus_glaber_male
ENSFDAG00000007858	-	87	89.548	ENSHGLG00100019910	-	89	89.548	Heterocephalus_glaber_male
ENSFDAG00000007858	-	98	90.076	ENSSTOG00000025560	-	99	90.076	Ictidomys_tridecemlineatus
ENSFDAG00000007858	-	98	75.188	ENSSTOG00000023820	-	99	75.188	Ictidomys_tridecemlineatus
ENSFDAG00000007858	-	98	80.151	ENSSTOG00000022853	-	95	80.151	Ictidomys_tridecemlineatus
ENSFDAG00000007858	-	98	80.916	ENSJJAG00000017385	-	95	80.916	Jaculus_jaculus
ENSFDAG00000007858	-	98	56.743	ENSJJAG00000014424	-	93	56.743	Jaculus_jaculus
ENSFDAG00000007858	-	96	85.185	ENSJJAG00000014334	-	93	85.185	Jaculus_jaculus
ENSFDAG00000007858	-	86	72.832	ENSJJAG00000000554	-	81	72.832	Jaculus_jaculus
ENSFDAG00000007858	-	99	72.613	ENSJJAG00000022288	-	95	72.613	Jaculus_jaculus
ENSFDAG00000007858	-	98	87.786	ENSLAFG00000000424	HNRNPF	99	87.786	Loxodonta_africana
ENSFDAG00000007858	-	98	88.295	ENSMFAG00000021184	HNRNPF	99	88.295	Macaca_fascicularis
ENSFDAG00000007858	-	98	88.295	ENSMMUG00000020982	HNRNPF	99	88.295	Macaca_mulatta
ENSFDAG00000007858	-	98	88.295	ENSMLEG00000023515	HNRNPF	99	88.295	Mandrillus_leucophaeus
ENSFDAG00000007858	-	98	89.313	ENSMAUG00000007892	Hnrnpf	99	89.313	Mesocricetus_auratus
ENSFDAG00000007858	-	87	79.772	ENSMICG00000043739	-	98	79.772	Microcebus_murinus
ENSFDAG00000007858	-	98	72.953	ENSMICG00000044171	-	95	72.953	Microcebus_murinus
ENSFDAG00000007858	-	98	88.041	ENSMOCG00000014915	Hnrnpf	99	88.041	Microtus_ochrogaster
ENSFDAG00000007858	-	98	89.313	ENSMUSG00000042079	Hnrnpf	99	96.135	Mus_musculus
ENSFDAG00000007858	-	98	88.041	MGP_PahariEiJ_G0026903	-	99	88.041	Mus_pahari
ENSFDAG00000007858	-	99	88.471	ENSMPUG00000017283	HNRNPF	99	88.471	Mustela_putorius_furo
ENSFDAG00000007858	-	87	95.455	ENSMLUG00000007261	HNRNPF	85	95.455	Myotis_lucifugus
ENSFDAG00000007858	-	87	69.231	ENSNGAG00000009482	-	84	69.231	Nannospalax_galili
ENSFDAG00000007858	-	98	88.804	ENSNGAG00000010409	-	99	88.804	Nannospalax_galili
ENSFDAG00000007858	-	87	78.977	ENSNGAG00000014079	-	84	78.977	Nannospalax_galili
ENSFDAG00000007858	-	98	88.550	ENSNLEG00000019098	HNRNPF	95	88.550	Nomascus_leucogenys
ENSFDAG00000007858	-	98	90.585	ENSODEG00000019266	-	99	90.585	Octodon_degus
ENSFDAG00000007858	-	98	85.496	ENSODEG00000002359	-	98	85.496	Octodon_degus
ENSFDAG00000007858	-	98	84.478	ENSOCUG00000024604	-	95	84.478	Oryctolagus_cuniculus
ENSFDAG00000007858	-	98	89.059	ENSOCUG00000024719	-	99	89.059	Oryctolagus_cuniculus
ENSFDAG00000007858	-	98	83.969	ENSOGAG00000030480	-	99	83.969	Otolemur_garnettii
ENSFDAG00000007858	-	87	92.351	ENSOGAG00000013734	-	99	92.351	Otolemur_garnettii
ENSFDAG00000007858	-	87	78.125	ENSOARG00000016658	-	97	78.125	Ovis_aries
ENSFDAG00000007858	-	87	97.159	ENSOARG00000003995	HNRNPF	91	97.159	Ovis_aries
ENSFDAG00000007858	-	87	97.443	ENSPPRG00000021222	HNRNPF	99	97.443	Panthera_pardus
ENSFDAG00000007858	-	87	97.443	ENSPTIG00000009644	HNRNPF	99	97.443	Panthera_tigris_altaica
ENSFDAG00000007858	-	98	88.295	ENSPTRG00000002446	HNRNPF	99	88.295	Pan_troglodytes
ENSFDAG00000007858	-	98	88.041	ENSPANG00000002212	HNRNPF	99	88.041	Papio_anubis
ENSFDAG00000007858	-	98	88.295	ENSPPYG00000002212	HNRNPF	99	88.295	Pongo_abelii
ENSFDAG00000007858	-	98	87.532	ENSPCAG00000013169	HNRNPF	99	87.532	Procavia_capensis
ENSFDAG00000007858	-	87	96.307	ENSPVAG00000011646	HNRNPF	85	96.307	Pteropus_vampyrus
ENSFDAG00000007858	-	98	89.313	ENSRNOG00000014562	Hnrnpf	99	89.313	Rattus_norvegicus
ENSFDAG00000007858	-	98	88.295	ENSRROG00000001235	HNRNPF	99	88.295	Rhinopithecus_roxellana
ENSFDAG00000007858	-	98	88.295	ENSSBOG00000018361	HNRNPF	99	88.295	Saimiri_boliviensis_boliviensis
ENSFDAG00000007858	-	87	96.875	ENSSARG00000010059	HNRNPF	99	96.875	Sorex_araneus
ENSFDAG00000007858	-	87	97.443	ENSSSCG00000010203	-	99	97.443	Sus_scrofa
ENSFDAG00000007858	-	85	71.556	ENSSSCG00000024956	-	95	71.556	Sus_scrofa
ENSFDAG00000007858	-	98	64.631	ENSTBEG00000016094	HNRNPF	97	64.631	Tupaia_belangeri
ENSFDAG00000007858	-	87	97.443	ENSUAMG00000000455	HNRNPF	99	97.443	Ursus_americanus
ENSFDAG00000007858	-	87	97.443	ENSUMAG00000016485	HNRNPF	99	97.443	Ursus_maritimus
ENSFDAG00000007858	-	87	97.443	ENSVVUG00000021261	HNRNPF	99	97.443	Vulpes_vulpes