EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSFDAG00000007882 (Gene tree)
Gene ID
104866982
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Fukomys_damarensis
Status
putative
Strand
Plus strand
Length
28411 bases
Position
chrKN122452.1:3213843-3242253
Accession
104866982
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFDAP00000021201CSDPF00313.227e-8615
ENSFDAP00000021201CSDPF00313.227e-8625
ENSFDAP00000021201CSDPF00313.227e-8635
ENSFDAP00000021201CSDPF00313.227e-8645
ENSFDAP00000021201CSDPF00313.227e-8655
ENSFDAP00000021198CSDPF00313.221.9e-6914
ENSFDAP00000021198CSDPF00313.221.9e-6924
ENSFDAP00000021198CSDPF00313.221.9e-6934
ENSFDAP00000021198CSDPF00313.221.9e-6944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFDAT00000011223CSDE1-2023085XM_010631221ENSFDAP00000021201798 (aa)XP_010629523UPI00053F8DB5
ENSFDAT00000011205CSDE1-2013231-ENSFDAP00000021198668 (aa)--
Gene Model
Click here to download ENSFDAG00000007882's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000007882's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFDAG00000007882CSDE110099.251ENSG00000009307CSDE1100100.000Homo_sapiens
ENSFDAG00000007882CSDE110076.602ENSAPOG00000015538csde19976.602Acanthochromis_polyacanthus
ENSFDAG00000007882CSDE110097.605ENSAMEG00000017129CSDE19397.605Ailuropoda_melanoleuca
ENSFDAG00000007882CSDE19176.486ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSFDAG00000007882CSDE110076.602ENSAOCG00000011510csde19976.602Amphiprion_ocellaris
ENSFDAG00000007882CSDE110077.154ENSAPEG00000007194csde19976.762Amphiprion_percula
ENSFDAG00000007882CSDE110076.006ENSATEG00000003864csde19976.006Anabas_testudineus
ENSFDAG00000007882CSDE110090.719ENSAPLG00000008797CSDE19990.719Anas_platyrhynchos
ENSFDAG00000007882CSDE110091.855ENSACAG00000003120CSDE110091.855Anolis_carolinensis
ENSFDAG00000007882CSDE110098.952ENSANAG00000024665CSDE19598.952Aotus_nancymaae
ENSFDAG00000007882CSDE19273.404ENSANAG00000028396-9174.150Aotus_nancymaae
ENSFDAG00000007882CSDE110076.500ENSACLG00000013296csde110076.500Astatotilapia_calliptera
ENSFDAG00000007882CSDE110075.595ENSAMXG00000007436csde110073.566Astyanax_mexicanus
ENSFDAG00000007882CSDE110098.204ENSBTAG00000000678CSDE19998.204Bos_taurus
ENSFDAG00000007882CSDE110098.952ENSCJAG00000012565CSDE19598.747Callithrix_jacchus
ENSFDAG00000007882CSDE19898.928ENSCAFG00000009618CSDE19398.928Canis_familiaris
ENSFDAG00000007882CSDE110098.952ENSCAFG00020000481CSDE19998.952Canis_lupus_dingo
ENSFDAG00000007882CSDE110098.204ENSCHIG00000017250CSDE19998.204Capra_hircus
ENSFDAG00000007882CSDE110098.371ENSTSYG00000003747CSDE110098.371Carlito_syrichta
ENSFDAG00000007882CSDE110092.982ENSCAPG00000015128CSDE110092.982Cavia_aperea
ENSFDAG00000007882CSDE110093.985ENSCPOG00000040388CSDE110093.985Cavia_porcellus
ENSFDAG00000007882CSDE19676.485ENSCCAG00000033677-9976.010Cebus_capucinus
ENSFDAG00000007882CSDE110098.952ENSCCAG00000036794CSDE110098.747Cebus_capucinus
ENSFDAG00000007882CSDE19973.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSFDAG00000007882CSDE110099.251ENSCATG00000036962CSDE19899.050Cercocebus_atys
ENSFDAG00000007882CSDE110099.123ENSCLAG00000006618CSDE110099.123Chinchilla_lanigera
ENSFDAG00000007882CSDE110098.997ENSCSAG00000001658CSDE19598.997Chlorocebus_sabaeus
ENSFDAG00000007882CSDE110099.080ENSCHOG00000000918CSDE18599.080Choloepus_hoffmanni
ENSFDAG00000007882CSDE110092.231ENSCPBG00000016547CSDE110092.231Chrysemys_picta_bellii
ENSFDAG00000007882CSDE19842.113ENSCING00000014465-9642.665Ciona_intestinalis
ENSFDAG00000007882CSDE19642.503ENSCSAVG00000008100-9842.503Ciona_savignyi
ENSFDAG00000007882CSDE110099.251ENSCANG00000035096CSDE19899.050Colobus_angolensis_palliatus
ENSFDAG00000007882CSDE110093.784ENSCANG00000031069-10093.784Colobus_angolensis_palliatus
ENSFDAG00000007882CSDE110079.341ENSCGRG00001014011-10078.195Cricetulus_griseus_chok1gshd
ENSFDAG00000007882CSDE110098.622ENSCGRG00001016833-10098.622Cricetulus_griseus_chok1gshd
ENSFDAG00000007882CSDE19997.773ENSCGRG00000002225-10097.773Cricetulus_griseus_crigri
ENSFDAG00000007882CSDE110079.389ENSCGRG00000005831-9979.389Cricetulus_griseus_crigri
ENSFDAG00000007882CSDE110076.418ENSCSEG00000002620csde110074.250Cynoglossus_semilaevis
ENSFDAG00000007882CSDE110076.125ENSCVAG00000001344csde110075.776Cyprinodon_variegatus
ENSFDAG00000007882CSDE110077.278ENSDARG00000074758csde19884.252Danio_rerio
ENSFDAG00000007882CSDE110098.206ENSDNOG00000010287-9298.206Dasypus_novemcinctus
ENSFDAG00000007882CSDE110098.120ENSDORG00000011609Csde110098.120Dipodomys_ordii
ENSFDAG00000007882CSDE19747.382FBgn0263352Unr7348.594Drosophila_melanogaster
ENSFDAG00000007882CSDE18985.929ENSETEG00000006280-9985.929Echinops_telfairi
ENSFDAG00000007882CSDE110076.946ENSETEG00000013678-9776.946Echinops_telfairi
ENSFDAG00000007882CSDE19398.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSFDAG00000007882CSDE19068.046ENSETEG00000007109-9968.046Echinops_telfairi
ENSFDAG00000007882CSDE19957.037ENSEBUG00000008647csde19953.929Eptatretus_burgeri
ENSFDAG00000007882CSDE110098.653ENSEASG00005006284CSDE110098.622Equus_asinus_asinus
ENSFDAG00000007882CSDE110098.653ENSECAG00000020885CSDE110098.622Equus_caballus
ENSFDAG00000007882CSDE19299.476ENSEEUG00000006286CSDE16899.476Erinaceus_europaeus
ENSFDAG00000007882CSDE110074.481ENSELUG00000015507csde19974.481Esox_lucius
ENSFDAG00000007882CSDE110098.952ENSFCAG00000029266CSDE19998.952Felis_catus
ENSFDAG00000007882CSDE110091.855ENSFALG00000003407CSDE110091.855Ficedula_albicollis
ENSFDAG00000007882CSDE110076.280ENSFHEG00000010799csde110076.280Fundulus_heteroclitus
ENSFDAG00000007882CSDE19976.596ENSGMOG00000012731csde110076.596Gadus_morhua
ENSFDAG00000007882CSDE19891.816ENSGALG00000002139CSDE19891.816Gallus_gallus
ENSFDAG00000007882CSDE19174.865ENSGAFG00000005241csde19474.865Gambusia_affinis
ENSFDAG00000007882CSDE19977.375ENSGACG00000004544csde110077.375Gasterosteus_aculeatus
ENSFDAG00000007882CSDE110091.855ENSGAGG00000017685CSDE110091.855Gopherus_agassizii
ENSFDAG00000007882CSDE110099.251ENSGGOG00000002164CSDE19999.251Gorilla_gorilla
ENSFDAG00000007882CSDE110075.970ENSHBUG00000020315csde19975.970Haplochromis_burtoni
ENSFDAG00000007882CSDE110088.623ENSHGLG00000003829-9988.623Heterocephalus_glaber_female
ENSFDAG00000007882CSDE110082.707ENSHGLG00000019549-10082.707Heterocephalus_glaber_female
ENSFDAG00000007882CSDE19980.803ENSHGLG00000000650-9980.803Heterocephalus_glaber_female
ENSFDAG00000007882CSDE19990.200ENSHGLG00000010039-10090.200Heterocephalus_glaber_female
ENSFDAG00000007882CSDE110089.671ENSHGLG00000008555-10089.671Heterocephalus_glaber_female
ENSFDAG00000007882CSDE19986.626ENSHGLG00000007471-9786.626Heterocephalus_glaber_female
ENSFDAG00000007882CSDE110090.100ENSHGLG00000009620-10090.351Heterocephalus_glaber_female
ENSFDAG00000007882CSDE19989.978ENSHGLG00100006910-10089.978Heterocephalus_glaber_male
ENSFDAG00000007882CSDE19985.106ENSHGLG00100002245-9985.106Heterocephalus_glaber_male
ENSFDAG00000007882CSDE110099.749ENSHGLG00100019438-10099.749Heterocephalus_glaber_male
ENSFDAG00000007882CSDE19384.466ENSHGLG00100004195-9984.466Heterocephalus_glaber_male
ENSFDAG00000007882CSDE110082.934ENSHGLG00100012072-10082.770Heterocephalus_glaber_male
ENSFDAG00000007882CSDE19882.405ENSHGLG00100004833-10082.405Heterocephalus_glaber_male
ENSFDAG00000007882CSDE19983.587ENSHGLG00100007287-9783.587Heterocephalus_glaber_male
ENSFDAG00000007882CSDE110078.924ENSHGLG00100001846-9978.924Heterocephalus_glaber_male
ENSFDAG00000007882CSDE110075.750ENSHCOG00000004158csde19975.224Hippocampus_comes
ENSFDAG00000007882CSDE110076.190ENSIPUG00000000355csde110073.441Ictalurus_punctatus
ENSFDAG00000007882CSDE18682.863ENSSTOG00000032722-9882.863Ictidomys_tridecemlineatus
ENSFDAG00000007882CSDE19982.530ENSSTOG00000030994-10079.901Ictidomys_tridecemlineatus
ENSFDAG00000007882CSDE110098.371ENSJJAG00000019571Csde110098.371Jaculus_jaculus
ENSFDAG00000007882CSDE110076.149ENSKMAG00000005685csde110075.773Kryptolebias_marmoratus
ENSFDAG00000007882CSDE110076.453ENSLBEG00000014770csde19976.453Labrus_bergylta
ENSFDAG00000007882CSDE110079.529ENSLACG00000018452CSDE19479.529Latimeria_chalumnae
ENSFDAG00000007882CSDE110079.725ENSLOCG00000010413csde19479.725Lepisosteus_oculatus
ENSFDAG00000007882CSDE110097.156ENSLAFG00000007150CSDE19597.156Loxodonta_africana
ENSFDAG00000007882CSDE110099.251ENSMFAG00000003674CSDE19999.251Macaca_fascicularis
ENSFDAG00000007882CSDE110099.251ENSMMUG00000001974CSDE19999.507Macaca_mulatta
ENSFDAG00000007882CSDE110099.251ENSMNEG00000045247CSDE19899.050Macaca_nemestrina
ENSFDAG00000007882CSDE110098.952ENSMLEG00000038673CSDE19598.747Mandrillus_leucophaeus
ENSFDAG00000007882CSDE19977.280ENSMAMG00000008821csde19977.280Mastacembelus_armatus
ENSFDAG00000007882CSDE110076.500ENSMZEG00005021675csde19975.970Maylandia_zebra
ENSFDAG00000007882CSDE110090.433ENSMGAG00000016381CSDE19891.688Meleagris_gallopavo
ENSFDAG00000007882CSDE110098.622ENSMAUG00000014031Csde110098.622Mesocricetus_auratus
ENSFDAG00000007882CSDE110098.204ENSMICG00000002050CSDE19998.438Microcebus_murinus
ENSFDAG00000007882CSDE110098.622ENSMOCG00000018960Csde110098.622Microtus_ochrogaster
ENSFDAG00000007882CSDE110076.304ENSMMOG00000015075csde110074.282Mola_mola
ENSFDAG00000007882CSDE110095.739ENSMODG00000004685CSDE110095.739Monodelphis_domestica
ENSFDAG00000007882CSDE110076.602ENSMALG00000007132csde110074.407Monopterus_albus
ENSFDAG00000007882CSDE110098.371MGP_CAROLIEiJ_G0025444Csde110098.371Mus_caroli
ENSFDAG00000007882CSDE110098.496ENSMUSG00000068823Csde110098.496Mus_musculus
ENSFDAG00000007882CSDE110098.747MGP_PahariEiJ_G0026888Csde110098.747Mus_pahari
ENSFDAG00000007882CSDE110098.747MGP_SPRETEiJ_G0026394Csde110098.747Mus_spretus
ENSFDAG00000007882CSDE19898.851ENSMPUG00000005753CSDE19998.921Mustela_putorius_furo
ENSFDAG00000007882CSDE110098.054ENSMLUG00000005681CSDE19498.054Myotis_lucifugus
ENSFDAG00000007882CSDE19971.047ENSNGAG00000012599-10071.047Nannospalax_galili
ENSFDAG00000007882CSDE110098.872ENSNGAG00000021929Csde110098.872Nannospalax_galili
ENSFDAG00000007882CSDE110075.970ENSNBRG00000020808csde19975.970Neolamprologus_brichardi
ENSFDAG00000007882CSDE110099.102ENSNLEG00000004842CSDE19699.102Nomascus_leucogenys
ENSFDAG00000007882CSDE19896.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSFDAG00000007882CSDE19897.087ENSOPRG00000005002CSDE17697.087Ochotona_princeps
ENSFDAG00000007882CSDE19867.699ENSODEG00000005979-9867.699Octodon_degus
ENSFDAG00000007882CSDE110098.997ENSODEG00000007383-10098.997Octodon_degus
ENSFDAG00000007882CSDE19976.126ENSONIG00000009309csde19976.126Oreochromis_niloticus
ENSFDAG00000007882CSDE110079.302ENSOANG00000003346-10079.302Ornithorhynchus_anatinus
ENSFDAG00000007882CSDE110098.054ENSOCUG00000016438CSDE19597.995Oryctolagus_cuniculus
ENSFDAG00000007882CSDE110076.119ENSORLG00000000707csde19976.126Oryzias_latipes
ENSFDAG00000007882CSDE110076.500ENSORLG00020005148csde19976.126Oryzias_latipes_hni
ENSFDAG00000007882CSDE110076.500ENSORLG00015019415csde19976.126Oryzias_latipes_hsok
ENSFDAG00000007882CSDE110077.278ENSOMEG00000015656csde19977.061Oryzias_melastigma
ENSFDAG00000007882CSDE110099.102ENSOGAG00000012127CSDE19499.102Otolemur_garnettii
ENSFDAG00000007882CSDE110098.353ENSOARG00000020034CSDE19498.353Ovis_aries
ENSFDAG00000007882CSDE110099.251ENSPPAG00000025861CSDE19999.251Pan_paniscus
ENSFDAG00000007882CSDE110098.952ENSPPRG00000006747CSDE19598.872Panthera_pardus
ENSFDAG00000007882CSDE110098.952ENSPTIG00000015468CSDE110098.872Panthera_tigris_altaica
ENSFDAG00000007882CSDE110099.251ENSPTRG00000033721CSDE110098.997Pan_troglodytes
ENSFDAG00000007882CSDE110099.251ENSPANG00000018873CSDE19999.251Papio_anubis
ENSFDAG00000007882CSDE110076.119ENSPKIG00000009459csde110073.875Paramormyrops_kingsleyae
ENSFDAG00000007882CSDE19695.354ENSPSIG00000003823CSDE19695.354Pelodiscus_sinensis
ENSFDAG00000007882CSDE110075.708ENSPMGG00000000772csde19975.708Periophthalmus_magnuspinnatus
ENSFDAG00000007882CSDE110098.622ENSPEMG00000020357-10098.622Peromyscus_maniculatus_bairdii
ENSFDAG00000007882CSDE110095.865ENSPCIG00000022587CSDE110095.865Phascolarctos_cinereus
ENSFDAG00000007882CSDE19975.378ENSPFOG00000012664csde110075.311Poecilia_formosa
ENSFDAG00000007882CSDE19770.814ENSPLAG00000017680csde19370.814Poecilia_latipinna
ENSFDAG00000007882CSDE19870.713ENSPMEG00000005094csde19670.713Poecilia_mexicana
ENSFDAG00000007882CSDE110075.652ENSPREG00000011631csde110073.469Poecilia_reticulata
ENSFDAG00000007882CSDE110098.872ENSPPYG00000000996CSDE110098.872Pongo_abelii
ENSFDAG00000007882CSDE110098.098ENSPCAG00000014368CSDE19098.098Procavia_capensis
ENSFDAG00000007882CSDE19084.328ENSPCOG00000008223-9282.847Propithecus_coquereli
ENSFDAG00000007882CSDE110098.802ENSPCOG00000017893CSDE110098.622Propithecus_coquereli
ENSFDAG00000007882CSDE110092.066ENSPVAG00000008225CSDE19492.066Pteropus_vampyrus
ENSFDAG00000007882CSDE110075.970ENSPNYG00000013745csde19975.970Pundamilia_nyererei
ENSFDAG00000007882CSDE110076.654ENSPNAG00000001958csde110074.032Pygocentrus_nattereri
ENSFDAG00000007882CSDE110098.622ENSRNOG00000061058Csde110098.622Rattus_norvegicus
ENSFDAG00000007882CSDE19997.235ENSRBIG00000038088-9997.235Rhinopithecus_bieti
ENSFDAG00000007882CSDE110093.116ENSRBIG00000038966-9493.116Rhinopithecus_bieti
ENSFDAG00000007882CSDE110099.251ENSRROG00000043101CSDE19898.815Rhinopithecus_roxellana
ENSFDAG00000007882CSDE110098.952ENSSBOG00000035592CSDE19598.747Saimiri_boliviensis_boliviensis
ENSFDAG00000007882CSDE110095.359ENSSHAG00000009831CSDE19995.359Sarcophilus_harrisii
ENSFDAG00000007882CSDE110076.269ENSSFOG00015007498csde110076.493Scleropages_formosus
ENSFDAG00000007882CSDE110077.049ENSSMAG00000007203csde19977.211Scophthalmus_maximus
ENSFDAG00000007882CSDE110076.453ENSSDUG00000015380csde19976.453Seriola_dumerili
ENSFDAG00000007882CSDE110076.904ENSSLDG00000008819csde110076.904Seriola_lalandi_dorsalis
ENSFDAG00000007882CSDE110097.455ENSSARG00000000738CSDE19397.455Sorex_araneus
ENSFDAG00000007882CSDE110091.479ENSSPUG00000008714CSDE110091.479Sphenodon_punctatus
ENSFDAG00000007882CSDE110077.029ENSSPAG00000000716csde19976.453Stegastes_partitus
ENSFDAG00000007882CSDE110098.802ENSSSCG00000006752CSDE19998.802Sus_scrofa
ENSFDAG00000007882CSDE110090.875ENSTGUG00000000972CSDE110090.875Taeniopygia_guttata
ENSFDAG00000007882CSDE110073.433ENSTRUG00000007996csde19973.433Takifugu_rubripes
ENSFDAG00000007882CSDE19183.721ENSTNIG00000010878csde19883.721Tetraodon_nigroviridis
ENSFDAG00000007882CSDE19398.718ENSTBEG00000011880-61100.000Tupaia_belangeri
ENSFDAG00000007882CSDE110097.904ENSTTRG00000015583CSDE19497.904Tursiops_truncatus
ENSFDAG00000007882CSDE18999.674ENSUAMG00000021779-10099.035Ursus_americanus
ENSFDAG00000007882CSDE18994.330ENSUAMG00000024289-9989.724Ursus_americanus
ENSFDAG00000007882CSDE19998.575ENSUMAG00000011714-9998.575Ursus_maritimus
ENSFDAG00000007882CSDE110092.515ENSUMAG00000009720-9492.515Ursus_maritimus
ENSFDAG00000007882CSDE110097.872ENSVPAG00000000749CSDE17997.653Vicugna_pacos
ENSFDAG00000007882CSDE19199.091ENSVVUG00000009890CSDE19498.977Vulpes_vulpes
ENSFDAG00000007882CSDE110085.518ENSXETG00000021448csde110085.518Xenopus_tropicalis
ENSFDAG00000007882CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSFDAG00000007882CSDE110076.875ENSXMAG00000009080csde19975.857Xiphophorus_maculatus

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