EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000008167 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 17881 bases
Position: chrKN123945.1:1198545-1216425
Accession: 104849598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020805	RRM_1	PF00076.22	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000011545	-	2717	XM_010606101	ENSFDAP00000020805	137 (aa)	XP_010604403	-

Gene Model

Click here to download ENSFDAG00000008167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000008167	-	97	48.889	ENSFDAG00000011431	-	63	48.889
ENSFDAG00000008167	-	66	39.706	ENSFDAG00000014531	-	50	37.500
ENSFDAG00000008167	-	99	50.370	ENSFDAG00000021452	-	54	50.370
ENSFDAG00000008167	-	97	50.370	ENSFDAG00000014800	-	57	50.370
ENSFDAG00000008167	-	85	53.390	ENSFDAG00000019725	HNRNPH1	51	53.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008167	-	100	89.781	ENSG00000132463	GRSF1	65	89.781	Homo_sapiens
ENSFDAG00000008167	-	100	90.511	ENSAMEG00000005896	GRSF1	71	90.511	Ailuropoda_melanoleuca
ENSFDAG00000008167	-	99	73.333	ENSACAG00000012921	GRSF1	54	73.333	Anolis_carolinensis
ENSFDAG00000008167	-	100	90.511	ENSANAG00000022114	GRSF1	73	90.511	Aotus_nancymaae
ENSFDAG00000008167	-	100	89.781	ENSBTAG00000008577	GRSF1	71	89.781	Bos_taurus
ENSFDAG00000008167	-	100	90.511	ENSCJAG00000014477	GRSF1	74	90.511	Callithrix_jacchus
ENSFDAG00000008167	-	100	90.511	ENSCAFG00000002922	GRSF1	74	90.511	Canis_familiaris
ENSFDAG00000008167	-	100	90.511	ENSCAFG00020027060	GRSF1	61	90.511	Canis_lupus_dingo
ENSFDAG00000008167	-	100	89.781	ENSCHIG00000021580	GRSF1	53	89.781	Capra_hircus
ENSFDAG00000008167	-	100	83.942	ENSTSYG00000028860	-	74	83.942	Carlito_syrichta
ENSFDAG00000008167	-	100	90.511	ENSTSYG00000008487	-	66	90.511	Carlito_syrichta
ENSFDAG00000008167	-	100	88.321	ENSCAPG00000000156	GRSF1	73	88.321	Cavia_aperea
ENSFDAG00000008167	-	100	88.321	ENSCPOG00000011662	GRSF1	76	88.321	Cavia_porcellus
ENSFDAG00000008167	-	100	89.781	ENSCCAG00000028735	-	53	89.781	Cebus_capucinus
ENSFDAG00000008167	-	100	90.511	ENSCATG00000035808	GRSF1	66	90.511	Cercocebus_atys
ENSFDAG00000008167	-	100	92.701	ENSCLAG00000003057	GRSF1	78	92.701	Chinchilla_lanigera
ENSFDAG00000008167	-	100	90.511	ENSCSAG00000004856	GRSF1	53	90.511	Chlorocebus_sabaeus
ENSFDAG00000008167	-	99	75.556	ENSCPBG00000019502	GRSF1	50	75.556	Chrysemys_picta_bellii
ENSFDAG00000008167	-	100	90.511	ENSCANG00000037992	GRSF1	66	90.511	Colobus_angolensis_palliatus
ENSFDAG00000008167	-	100	89.781	ENSCGRG00001019953	Grsf1	71	89.781	Cricetulus_griseus_chok1gshd
ENSFDAG00000008167	-	100	89.781	ENSCGRG00000005357	Grsf1	71	89.781	Cricetulus_griseus_crigri
ENSFDAG00000008167	-	100	91.241	ENSDORG00000015145	Grsf1	100	91.241	Dipodomys_ordii
ENSFDAG00000008167	-	100	89.051	ENSETEG00000013786	GRSF1	87	89.051	Echinops_telfairi
ENSFDAG00000008167	-	100	91.241	ENSEASG00005016685	GRSF1	50	91.241	Equus_asinus_asinus
ENSFDAG00000008167	-	100	91.241	ENSECAG00000024208	GRSF1	50	91.241	Equus_caballus
ENSFDAG00000008167	-	93	55.046	ENSELUG00000011613	-	71	54.386	Esox_lucius
ENSFDAG00000008167	-	100	90.511	ENSFCAG00000007270	GRSF1	54	90.511	Felis_catus
ENSFDAG00000008167	-	98	55.224	ENSFALG00000008394	GRSF1	52	55.224	Ficedula_albicollis
ENSFDAG00000008167	-	98	56.716	ENSGALG00000031160	GRSF1	66	56.716	Gallus_gallus
ENSFDAG00000008167	-	99	72.794	ENSGAGG00000006013	GRSF1	59	72.794	Gopherus_agassizii
ENSFDAG00000008167	-	100	89.781	ENSGGOG00000014852	-	65	89.781	Gorilla_gorilla
ENSFDAG00000008167	-	100	92.701	ENSHGLG00000000661	GRSF1	71	92.701	Heterocephalus_glaber_female
ENSFDAG00000008167	-	100	92.701	ENSHGLG00100005974	GRSF1	100	92.701	Heterocephalus_glaber_male
ENSFDAG00000008167	-	100	90.511	ENSSTOG00000011569	GRSF1	71	90.511	Ictidomys_tridecemlineatus
ENSFDAG00000008167	-	100	88.321	ENSJJAG00000005325	Grsf1	100	88.321	Jaculus_jaculus
ENSFDAG00000008167	-	95	59.231	ENSLACG00000009507	GRSF1	50	59.231	Latimeria_chalumnae
ENSFDAG00000008167	-	100	53.957	ENSLOCG00000011589	GRSF1	61	53.957	Lepisosteus_oculatus
ENSFDAG00000008167	-	100	89.781	ENSLAFG00000017032	-	74	89.781	Loxodonta_africana
ENSFDAG00000008167	-	100	90.511	ENSMFAG00000037346	GRSF1	66	90.511	Macaca_fascicularis
ENSFDAG00000008167	-	100	90.511	ENSMMUG00000000380	GRSF1	66	90.511	Macaca_mulatta
ENSFDAG00000008167	-	98	82.090	ENSMNEG00000023162	GRSF1	68	82.090	Macaca_nemestrina
ENSFDAG00000008167	-	100	90.511	ENSMLEG00000007180	GRSF1	71	90.511	Mandrillus_leucophaeus
ENSFDAG00000008167	-	98	57.463	ENSMGAG00000009940	GRSF1	55	57.463	Meleagris_gallopavo
ENSFDAG00000008167	-	100	89.781	ENSMICG00000005385	GRSF1	77	89.781	Microcebus_murinus
ENSFDAG00000008167	-	100	89.781	ENSMOCG00000012769	-	100	89.781	Microtus_ochrogaster
ENSFDAG00000008167	-	100	86.861	ENSMODG00000019088	GRSF1	57	86.861	Monodelphis_domestica
ENSFDAG00000008167	-	100	89.781	MGP_CAROLIEiJ_G0027377	Grsf1	100	89.781	Mus_caroli
ENSFDAG00000008167	-	100	89.781	ENSMUSG00000044221	Grsf1	100	89.781	Mus_musculus
ENSFDAG00000008167	-	100	89.051	MGP_PahariEiJ_G0017155	Grsf1	100	89.051	Mus_pahari
ENSFDAG00000008167	-	100	89.781	MGP_SPRETEiJ_G0028374	Grsf1	79	86.207	Mus_spretus
ENSFDAG00000008167	-	100	91.241	ENSMPUG00000009499	GRSF1	68	91.241	Mustela_putorius_furo
ENSFDAG00000008167	-	100	90.000	ENSMLUG00000028158	GRSF1	71	90.000	Myotis_lucifugus
ENSFDAG00000008167	-	100	90.511	ENSNGAG00000022132	-	100	90.511	Nannospalax_galili
ENSFDAG00000008167	-	100	89.051	ENSNLEG00000007721	-	66	89.051	Nomascus_leucogenys
ENSFDAG00000008167	-	82	86.607	ENSMEUG00000015942	GRSF1	51	86.607	Notamacropus_eugenii
ENSFDAG00000008167	-	99	83.824	ENSODEG00000010775	-	89	83.824	Octodon_degus
ENSFDAG00000008167	-	100	89.781	ENSODEG00000001826	-	60	89.781	Octodon_degus
ENSFDAG00000008167	-	89	90.164	ENSODEG00000004897	-	59	90.164	Octodon_degus
ENSFDAG00000008167	-	74	50.980	ENSOANG00000013696	-	70	50.980	Ornithorhynchus_anatinus
ENSFDAG00000008167	-	100	90.511	ENSOCUG00000010029	GRSF1	60	90.511	Oryctolagus_cuniculus
ENSFDAG00000008167	-	95	83.846	ENSOGAG00000000141	-	61	83.846	Otolemur_garnettii
ENSFDAG00000008167	-	100	87.857	ENSOARG00000011898	GRSF1	71	87.857	Ovis_aries
ENSFDAG00000008167	-	100	89.781	ENSPPAG00000042456	-	66	89.781	Pan_paniscus
ENSFDAG00000008167	-	100	90.511	ENSPPRG00000022913	GRSF1	54	90.511	Panthera_pardus
ENSFDAG00000008167	-	100	90.511	ENSPTIG00000008060	GRSF1	71	90.511	Panthera_tigris_altaica
ENSFDAG00000008167	-	100	89.781	ENSPTRG00000016136	GRSF1	66	89.781	Pan_troglodytes
ENSFDAG00000008167	-	100	89.781	ENSPANG00000018597	GRSF1	66	89.781	Papio_anubis
ENSFDAG00000008167	-	90	72.500	ENSPSIG00000014267	-	80	72.500	Pelodiscus_sinensis
ENSFDAG00000008167	-	100	89.781	ENSPEMG00000012814	Grsf1	77	89.781	Peromyscus_maniculatus_bairdii
ENSFDAG00000008167	-	100	87.591	ENSPCIG00000000627	GRSF1	54	87.591	Phascolarctos_cinereus
ENSFDAG00000008167	-	90	88.350	ENSPPYG00000014812	GRSF1	53	88.350	Pongo_abelii
ENSFDAG00000008167	-	100	89.781	ENSPCAG00000013949	GRSF1	64	89.781	Procavia_capensis
ENSFDAG00000008167	-	100	89.781	ENSPVAG00000004338	GRSF1	57	89.781	Pteropus_vampyrus
ENSFDAG00000008167	-	100	89.051	ENSRNOG00000003392	Grsf1	73	89.051	Rattus_norvegicus
ENSFDAG00000008167	-	100	90.511	ENSRBIG00000036494	GRSF1	66	90.511	Rhinopithecus_bieti
ENSFDAG00000008167	-	100	90.511	ENSRROG00000035735	GRSF1	66	90.511	Rhinopithecus_roxellana
ENSFDAG00000008167	-	90	91.453	ENSSBOG00000032141	GRSF1	82	91.453	Saimiri_boliviensis_boliviensis
ENSFDAG00000008167	-	100	87.591	ENSSHAG00000018365	GRSF1	67	87.591	Sarcophilus_harrisii
ENSFDAG00000008167	-	100	86.861	ENSSARG00000011681	GRSF1	75	86.861	Sorex_araneus
ENSFDAG00000008167	-	99	67.391	ENSSPUG00000007576	GRSF1	56	67.391	Sphenodon_punctatus
ENSFDAG00000008167	-	100	87.591	ENSSSCG00000008940	GRSF1	53	87.591	Sus_scrofa
ENSFDAG00000008167	-	98	54.478	ENSTGUG00000001644	GRSF1	57	54.478	Taeniopygia_guttata
ENSFDAG00000008167	-	100	89.781	ENSTBEG00000010173	GRSF1	75	89.781	Tupaia_belangeri
ENSFDAG00000008167	-	99	78.519	ENSTTRG00000008405	GRSF1	65	78.519	Tursiops_truncatus
ENSFDAG00000008167	-	100	90.511	ENSUAMG00000008901	GRSF1	67	90.511	Ursus_americanus
ENSFDAG00000008167	-	100	90.511	ENSUMAG00000003757	GRSF1	62	90.511	Ursus_maritimus
ENSFDAG00000008167	-	100	89.781	ENSVPAG00000011889	GRSF1	52	89.781	Vicugna_pacos
ENSFDAG00000008167	-	100	90.511	ENSVVUG00000004150	GRSF1	74	90.511	Vulpes_vulpes
ENSFDAG00000008167	-	96	58.955	ENSXETG00000013850	grsf1	57	54.000	Xenopus_tropicalis