EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000008220 (Gene tree)
Gene ID: 104855859
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 21403 bases
Position: chrKN125302.1:760960-782362
Accession: 104855859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020743	ResIII	PF04851.15	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000011604	CHD3-201	5943	XM_010614901	ENSFDAP00000020743	1980 (aa)	XP_010613203	-

Gene Model

Click here to download ENSFDAG00000008220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000008220	CHD3	72	72.435	ENSFDAG00000020219	-	97	66.684
ENSFDAG00000008220	CHD3	93	69.705	ENSFDAG00000012881	CHD5	92	71.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008220	CHD3	99	96.189	ENSG00000170004	CHD3	99	97.154	Homo_sapiens
ENSFDAG00000008220	CHD3	79	80.729	ENSAPOG00000005614	chd3	94	80.729	Acanthochromis_polyacanthus
ENSFDAG00000008220	CHD3	69	97.141	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSFDAG00000008220	CHD3	83	78.556	ENSACIG00000019671	chd3	99	79.467	Amphilophus_citrinellus
ENSFDAG00000008220	CHD3	80	81.250	ENSAOCG00000023784	chd3	97	81.375	Amphiprion_ocellaris
ENSFDAG00000008220	CHD3	72	79.292	ENSAPEG00000006341	chd3	92	74.987	Amphiprion_percula
ENSFDAG00000008220	CHD3	97	72.514	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSFDAG00000008220	CHD3	95	85.586	ENSACAG00000004276	CHD3	95	82.971	Anolis_carolinensis
ENSFDAG00000008220	CHD3	99	94.713	ENSANAG00000034323	CHD3	99	98.505	Aotus_nancymaae
ENSFDAG00000008220	CHD3	88	80.386	ENSACLG00000009222	chd3	97	74.601	Astatotilapia_calliptera
ENSFDAG00000008220	CHD3	99	95.531	ENSBTAG00000014377	CHD3	97	95.521	Bos_taurus
ENSFDAG00000008220	CHD3	99	96.138	ENSCJAG00000014766	CHD3	99	95.260	Callithrix_jacchus
ENSFDAG00000008220	CHD3	99	95.108	ENSCAFG00000016859	CHD3	99	94.957	Canis_familiaris
ENSFDAG00000008220	CHD3	95	98.026	ENSCAFG00020007422	CHD3	100	97.981	Canis_lupus_dingo
ENSFDAG00000008220	CHD3	99	95.397	ENSCHIG00000016737	CHD3	99	95.732	Capra_hircus
ENSFDAG00000008220	CHD3	99	95.411	ENSTSYG00000035658	CHD3	99	95.806	Carlito_syrichta
ENSFDAG00000008220	CHD3	99	93.121	ENSCAPG00000014864	CHD3	99	93.121	Cavia_aperea
ENSFDAG00000008220	CHD3	99	95.650	ENSCPOG00000022653	CHD3	99	95.650	Cavia_porcellus
ENSFDAG00000008220	CHD3	99	96.037	ENSCCAG00000034792	CHD3	99	95.159	Cebus_capucinus
ENSFDAG00000008220	CHD3	99	95.935	ENSCATG00000041717	CHD3	99	95.058	Cercocebus_atys
ENSFDAG00000008220	CHD3	99	96.797	ENSCLAG00000010523	CHD3	100	96.797	Chinchilla_lanigera
ENSFDAG00000008220	CHD3	99	95.732	ENSCSAG00000011122	CHD3	99	95.376	Chlorocebus_sabaeus
ENSFDAG00000008220	CHD3	86	86.521	ENSCPBG00000011966	CHD3	99	86.588	Chrysemys_picta_bellii
ENSFDAG00000008220	CHD3	99	95.361	ENSCANG00000037641	CHD3	99	95.200	Colobus_angolensis_palliatus
ENSFDAG00000008220	CHD3	99	94.665	ENSCGRG00001011306	Chd3	100	94.665	Cricetulus_griseus_chok1gshd
ENSFDAG00000008220	CHD3	93	90.518	ENSCGRG00000007878	Chd3	99	90.169	Cricetulus_griseus_crigri
ENSFDAG00000008220	CHD3	84	86.147	ENSCSEG00000004489	chd3	97	77.579	Cynoglossus_semilaevis
ENSFDAG00000008220	CHD3	84	82.072	ENSCVAG00000007293	chd3	92	82.996	Cyprinodon_variegatus
ENSFDAG00000008220	CHD3	88	81.940	ENSDARG00000021405	chd3	97	76.530	Danio_rerio
ENSFDAG00000008220	CHD3	99	81.001	ENSDNOG00000047846	CHD3	99	80.292	Dasypus_novemcinctus
ENSFDAG00000008220	CHD3	99	95.526	ENSDORG00000010713	Chd3	100	95.526	Dipodomys_ordii
ENSFDAG00000008220	CHD3	97	90.400	ENSETEG00000017733	CHD3	100	90.036	Echinops_telfairi
ENSFDAG00000008220	CHD3	54	78.033	ENSEBUG00000008310	chd3	99	70.351	Eptatretus_burgeri
ENSFDAG00000008220	CHD3	93	97.981	ENSEASG00005019360	CHD3	100	97.981	Equus_asinus_asinus
ENSFDAG00000008220	CHD3	93	98.036	ENSECAG00000010051	CHD3	100	98.036	Equus_caballus
ENSFDAG00000008220	CHD3	91	96.610	ENSEEUG00000015205	CHD3	93	96.610	Erinaceus_europaeus
ENSFDAG00000008220	CHD3	77	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSFDAG00000008220	CHD3	99	95.376	ENSFCAG00000009629	CHD3	96	95.376	Felis_catus
ENSFDAG00000008220	CHD3	85	80.203	ENSGMOG00000013599	chd3	89	80.812	Gadus_morhua
ENSFDAG00000008220	CHD3	56	76.723	ENSGAFG00000004055	chd3	95	78.175	Gambusia_affinis
ENSFDAG00000008220	CHD3	97	70.433	ENSGACG00000019275	chd3	97	72.176	Gasterosteus_aculeatus
ENSFDAG00000008220	CHD3	75	85.552	ENSGAGG00000013164	CHD3	98	86.257	Gopherus_agassizii
ENSFDAG00000008220	CHD3	99	95.562	ENSGGOG00000013496	CHD3	99	95.361	Gorilla_gorilla
ENSFDAG00000008220	CHD3	99	97.002	ENSHGLG00000012017	CHD3	99	96.919	Heterocephalus_glaber_female
ENSFDAG00000008220	CHD3	88	93.043	ENSHGLG00100013902	CHD3	99	93.043	Heterocephalus_glaber_male
ENSFDAG00000008220	CHD3	91	73.433	ENSHCOG00000010170	chd3	92	74.017	Hippocampus_comes
ENSFDAG00000008220	CHD3	84	80.198	ENSIPUG00000003271	chd3	96	79.556	Ictalurus_punctatus
ENSFDAG00000008220	CHD3	99	95.787	ENSSTOG00000025907	CHD3	100	95.787	Ictidomys_tridecemlineatus
ENSFDAG00000008220	CHD3	99	95.018	ENSJJAG00000017633	Chd3	100	95.018	Jaculus_jaculus
ENSFDAG00000008220	CHD3	82	90.047	ENSKMAG00000019292	chd3	97	74.562	Kryptolebias_marmoratus
ENSFDAG00000008220	CHD3	86	75.986	ENSLBEG00000028485	chd3	89	75.986	Labrus_bergylta
ENSFDAG00000008220	CHD3	97	73.039	ENSLACG00000008031	CHD3	99	73.455	Latimeria_chalumnae
ENSFDAG00000008220	CHD3	95	78.123	ENSLOCG00000013965	chd3	93	78.642	Lepisosteus_oculatus
ENSFDAG00000008220	CHD3	94	91.627	ENSLAFG00000000572	CHD3	100	91.627	Loxodonta_africana
ENSFDAG00000008220	CHD3	99	95.411	ENSMFAG00000020113	CHD3	99	96.450	Macaca_fascicularis
ENSFDAG00000008220	CHD3	99	93.041	ENSMMUG00000022221	CHD3	99	92.688	Macaca_mulatta
ENSFDAG00000008220	CHD3	99	95.374	ENSMNEG00000001728	CHD3	99	97.597	Macaca_nemestrina
ENSFDAG00000008220	CHD3	99	95.411	ENSMLEG00000032249	CHD3	99	95.058	Mandrillus_leucophaeus
ENSFDAG00000008220	CHD3	85	75.909	ENSMAMG00000000564	chd3	99	76.612	Mastacembelus_armatus
ENSFDAG00000008220	CHD3	99	94.318	ENSMAUG00000013873	Chd3	99	94.478	Mesocricetus_auratus
ENSFDAG00000008220	CHD3	99	95.833	ENSMICG00000008741	CHD3	99	92.947	Microcebus_murinus
ENSFDAG00000008220	CHD3	98	94.756	ENSMOCG00000004848	Chd3	100	94.756	Microtus_ochrogaster
ENSFDAG00000008220	CHD3	92	75.054	ENSMMOG00000012699	chd3	97	74.728	Mola_mola
ENSFDAG00000008220	CHD3	93	92.530	ENSMODG00000007509	CHD3	100	92.530	Monodelphis_domestica
ENSFDAG00000008220	CHD3	99	94.470	MGP_CAROLIEiJ_G0016564	Chd3	100	92.917	Mus_caroli
ENSFDAG00000008220	CHD3	99	94.571	ENSMUSG00000018474	Chd3	99	93.021	Mus_musculus
ENSFDAG00000008220	CHD3	99	94.924	MGP_PahariEiJ_G0017695	Chd3	100	93.226	Mus_pahari
ENSFDAG00000008220	CHD3	99	94.571	MGP_SPRETEiJ_G0017400	Chd3	100	93.021	Mus_spretus
ENSFDAG00000008220	CHD3	86	97.840	ENSMPUG00000008861	CHD3	100	97.840	Mustela_putorius_furo
ENSFDAG00000008220	CHD3	99	94.960	ENSMLUG00000014643	-	99	94.960	Myotis_lucifugus
ENSFDAG00000008220	CHD3	99	95.250	ENSNGAG00000000773	Chd3	99	95.250	Nannospalax_galili
ENSFDAG00000008220	CHD3	86	75.308	ENSNBRG00000000636	chd3	98	75.261	Neolamprologus_brichardi
ENSFDAG00000008220	CHD3	99	91.679	ENSNLEG00000009770	CHD3	100	92.527	Nomascus_leucogenys
ENSFDAG00000008220	CHD3	82	91.209	ENSMEUG00000005852	CHD3	85	91.209	Notamacropus_eugenii
ENSFDAG00000008220	CHD3	95	96.421	ENSOPRG00000011069	CHD3	100	96.421	Ochotona_princeps
ENSFDAG00000008220	CHD3	99	95.810	ENSODEG00000017785	CHD3	99	95.810	Octodon_degus
ENSFDAG00000008220	CHD3	72	79.384	ENSONIG00000009292	chd3	96	76.165	Oreochromis_niloticus
ENSFDAG00000008220	CHD3	98	90.793	ENSOCUG00000029299	CHD3	100	90.696	Oryctolagus_cuniculus
ENSFDAG00000008220	CHD3	80	71.252	ENSORLG00000007107	chd3	91	71.570	Oryzias_latipes
ENSFDAG00000008220	CHD3	54	75.442	ENSORLG00020008387	chd3	90	75.907	Oryzias_latipes_hni
ENSFDAG00000008220	CHD3	70	80.129	ENSOMEG00000013691	chd3	99	76.869	Oryzias_melastigma
ENSFDAG00000008220	CHD3	99	95.681	ENSOGAG00000003216	CHD3	99	95.325	Otolemur_garnettii
ENSFDAG00000008220	CHD3	99	92.447	ENSOARG00000017855	CHD3	99	92.699	Ovis_aries
ENSFDAG00000008220	CHD3	99	93.340	ENSPPAG00000032886	CHD3	99	94.731	Pan_paniscus
ENSFDAG00000008220	CHD3	99	95.579	ENSPPRG00000000626	CHD3	98	95.579	Panthera_pardus
ENSFDAG00000008220	CHD3	99	96.240	ENSPTRG00000008714	CHD3	99	95.714	Pan_troglodytes
ENSFDAG00000008220	CHD3	99	95.411	ENSPANG00000023938	CHD3	99	96.450	Papio_anubis
ENSFDAG00000008220	CHD3	98	74.177	ENSPKIG00000006305	chd3	96	79.180	Paramormyrops_kingsleyae
ENSFDAG00000008220	CHD3	55	90.237	ENSPSIG00000010177	CHD3	98	90.511	Pelodiscus_sinensis
ENSFDAG00000008220	CHD3	99	94.614	ENSPEMG00000014262	Chd3	99	94.614	Peromyscus_maniculatus_bairdii
ENSFDAG00000008220	CHD3	99	90.243	ENSPCIG00000005442	CHD3	98	92.839	Phascolarctos_cinereus
ENSFDAG00000008220	CHD3	72	78.498	ENSPFOG00000012464	chd3	88	75.039	Poecilia_formosa
ENSFDAG00000008220	CHD3	84	83.401	ENSPLAG00000002887	chd3	91	83.401	Poecilia_latipinna
ENSFDAG00000008220	CHD3	50	81.119	ENSPMEG00000016725	chd3	87	75.421	Poecilia_mexicana
ENSFDAG00000008220	CHD3	86	83.764	ENSPREG00000011044	chd3	96	80.041	Poecilia_reticulata
ENSFDAG00000008220	CHD3	95	95.571	ENSPPYG00000007940	CHD3	95	95.571	Pongo_abelii
ENSFDAG00000008220	CHD3	95	97.502	ENSPCAG00000004350	CHD3	96	97.502	Procavia_capensis
ENSFDAG00000008220	CHD3	99	95.783	ENSPCOG00000020952	CHD3	99	94.962	Propithecus_coquereli
ENSFDAG00000008220	CHD3	85	96.804	ENSPVAG00000016344	CHD3	87	96.804	Pteropus_vampyrus
ENSFDAG00000008220	CHD3	88	79.457	ENSPNAG00000020393	chd3	98	79.875	Pygocentrus_nattereri
ENSFDAG00000008220	CHD3	93	96.732	ENSRNOG00000009722	Chd3	100	96.732	Rattus_norvegicus
ENSFDAG00000008220	CHD3	99	92.380	ENSRBIG00000033562	CHD3	99	94.612	Rhinopithecus_bieti
ENSFDAG00000008220	CHD3	99	93.918	ENSRROG00000029554	CHD3	99	96.129	Rhinopithecus_roxellana
ENSFDAG00000008220	CHD3	99	96.240	ENSSBOG00000020719	CHD3	99	97.925	Saimiri_boliviensis_boliviensis
ENSFDAG00000008220	CHD3	98	90.765	ENSSHAG00000014412	CHD3	100	90.816	Sarcophilus_harrisii
ENSFDAG00000008220	CHD3	91	74.324	ENSSFOG00015023123	chd3	98	74.661	Scleropages_formosus
ENSFDAG00000008220	CHD3	78	90.741	ENSSMAG00000006451	chd3	99	74.985	Scophthalmus_maximus
ENSFDAG00000008220	CHD3	52	74.735	ENSSDUG00000005792	chd3	91	75.096	Seriola_dumerili
ENSFDAG00000008220	CHD3	81	80.928	ENSSPAG00000013694	chd3	99	80.928	Stegastes_partitus
ENSFDAG00000008220	CHD3	99	95.339	ENSSSCG00000021363	CHD3	100	97.655	Sus_scrofa
ENSFDAG00000008220	CHD3	72	77.648	ENSTRUG00000014990	chd3	86	77.923	Takifugu_rubripes
ENSFDAG00000008220	CHD3	95	73.594	ENSTNIG00000012998	chd3	97	72.970	Tetraodon_nigroviridis
ENSFDAG00000008220	CHD3	63	97.619	ENSTBEG00000011454	-	71	97.619	Tupaia_belangeri
ENSFDAG00000008220	CHD3	97	98.416	ENSTTRG00000010295	CHD3	97	98.416	Tursiops_truncatus
ENSFDAG00000008220	CHD3	92	96.734	ENSUAMG00000005475	CHD3	99	96.734	Ursus_americanus
ENSFDAG00000008220	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSFDAG00000008220	CHD3	95	98.026	ENSVVUG00000028011	CHD3	98	98.026	Vulpes_vulpes
ENSFDAG00000008220	CHD3	95	74.131	ENSXETG00000012991	chd3	92	74.039	Xenopus_tropicalis
ENSFDAG00000008220	CHD3	80	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus